Protein–RNA interactions for Protein: Q8N3C7

CLIP4, CAP-Gly domain-containing linker protein 4, humanhuman

Predictions only

Length 705 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP4Q8N3C7 MIR4771-2-201ENST00000577758 74 ntBASIC0.99□□□□□ -2.25
CLIP4Q8N3C7 MIR4771-1-201ENST00000582617 74 ntBASIC0.99□□□□□ -2.25
CLIP4Q8N3C7 MIR6078-201ENST00000611069 100 ntBASIC0.99□□□□□ -2.25
CLIP4Q8N3C7 5S_rRNA.15-201ENST00000611169 127 ntBASIC0.99□□□□□ -2.25
CLIP4Q8N3C7 ZNF654-201ENST00000309495 4957 ntAPPRIS P2 TSL 1 (best) BASIC0.98□□□□□ -2.25
CLIP4Q8N3C7 ZGRF1-202ENST00000309071 3347 ntTSL 1 (best) BASIC0.98□□□□□ -2.25
CLIP4Q8N3C7 Y_RNA.98-201ENST00000363109 102 ntBASIC0.98□□□□□ -2.25
CLIP4Q8N3C7 Y_RNA.163-201ENST00000363702 113 ntBASIC0.98□□□□□ -2.25
CLIP4Q8N3C7 RNU6-755P-201ENST00000364400 103 ntBASIC0.98□□□□□ -2.25
CLIP4Q8N3C7 RNU6-865P-201ENST00000364772 107 ntBASIC0.98□□□□□ -2.25
CLIP4Q8N3C7 RNU6-392P-201ENST00000364926 101 ntBASIC0.98□□□□□ -2.25
CLIP4Q8N3C7 RNU1-36P-201ENST00000365130 165 ntBASIC0.98□□□□□ -2.25
CLIP4Q8N3C7 Y_RNA.328-201ENST00000365208 113 ntBASIC0.98□□□□□ -2.25
CLIP4Q8N3C7 Y_RNA.360-201ENST00000365512 102 ntBASIC0.98□□□□□ -2.25
CLIP4Q8N3C7 MIR1302-5-201ENST00000408164 150 ntBASIC0.98□□□□□ -2.25
CLIP4Q8N3C7 RNU6-554P-201ENST00000410466 106 ntBASIC0.98□□□□□ -2.25
CLIP4Q8N3C7 RPS26P5-201ENST00000418544 335 ntBASIC0.98□□□□□ -2.25
CLIP4Q8N3C7 RNU7-48P-201ENST00000458875 63 ntBASIC0.98□□□□□ -2.25
CLIP4Q8N3C7 SNORD114-21-201ENST00000606412 72 ntBASIC0.98□□□□□ -2.25
CLIP4Q8N3C7 AC103810.9-201ENST00000606688 112 ntBASIC0.98□□□□□ -2.25
CLIP4Q8N3C7 uc_338.28-201ENST00000612082 187 ntBASIC0.98□□□□□ -2.25
CLIP4Q8N3C7 MIR1257-201ENST00000408490 117 ntBASIC0.97□□□□□ -2.25
CLIP4Q8N3C7 AC096949.1-201ENST00000412047 152 ntBASIC0.97□□□□□ -2.25
CLIP4Q8N3C7 ATP6V0E1P1-201ENST00000412537 226 ntBASIC0.97□□□□□ -2.25
CLIP4Q8N3C7 AL353813.1-201ENST00000440700 253 ntBASIC0.97□□□□□ -2.25
CLIP4Q8N3C7 OR2A41P-201ENST00000473586 105 ntBASIC0.97□□□□□ -2.25
CLIP4Q8N3C7 RNU6-1018P-201ENST00000516577 106 ntBASIC0.97□□□□□ -2.25
CLIP4Q8N3C7 AC020891.4-201ENST00000605745 93 ntBASIC0.97□□□□□ -2.25
CLIP4Q8N3C7 RNU6-403P-201ENST00000363163 104 ntBASIC0.96□□□□□ -2.26
CLIP4Q8N3C7 MIR34C-201ENST00000384831 77 ntBASIC0.96□□□□□ -2.26
CLIP4Q8N3C7 RNA5SP247-201ENST00000411181 105 ntBASIC0.96□□□□□ -2.26
CLIP4Q8N3C7 UBL5P1-201ENST00000507979 193 ntBASIC0.96□□□□□ -2.26
CLIP4Q8N3C7 RNU4ATAC11P-201ENST00000515939 126 ntBASIC0.96□□□□□ -2.26
CLIP4Q8N3C7 AC138749.4-201ENST00000563970 127 ntBASIC0.96□□□□□ -2.26
CLIP4Q8N3C7 MIR4491-201ENST00000581087 68 ntBASIC0.96□□□□□ -2.26
CLIP4Q8N3C7 MIR4295-201ENST00000585286 85 ntBASIC0.96□□□□□ -2.26
CLIP4Q8N3C7 MIR376B-201ENST00000614515 100 ntBASIC0.96□□□□□ -2.26
CLIP4Q8N3C7 MIR8070-201ENST00000616510 88 ntBASIC0.96□□□□□ -2.26
CLIP4Q8N3C7 U6.109-201ENST00000636749 87 ntBASIC0.96□□□□□ -2.26
CLIP4Q8N3C7 MIR1-1-201ENST00000362147 71 ntBASIC0.95□□□□□ -2.26
CLIP4Q8N3C7 RNA5SP133-201ENST00000363368 119 ntBASIC0.95□□□□□ -2.26
CLIP4Q8N3C7 RNU6-1099P-201ENST00000363533 107 ntBASIC0.95□□□□□ -2.26
CLIP4Q8N3C7 RNY1P2-201ENST00000364820 117 ntBASIC0.95□□□□□ -2.26
CLIP4Q8N3C7 MIR125B2-201ENST00000385128 89 ntBASIC0.95□□□□□ -2.26
CLIP4Q8N3C7 MIR577-201ENST00000385196 96 ntBASIC0.95□□□□□ -2.26
CLIP4Q8N3C7 MIR100-201ENST00000385259 80 ntBASIC0.95□□□□□ -2.26
CLIP4Q8N3C7 RNU6ATAC41P-201ENST00000408600 126 ntBASIC0.95□□□□□ -2.26
CLIP4Q8N3C7 RNU6ATAC33P-201ENST00000408647 126 ntBASIC0.95□□□□□ -2.26
CLIP4Q8N3C7 RNU4-83P-201ENST00000410863 133 ntBASIC0.95□□□□□ -2.26
CLIP4Q8N3C7 AL031737.1-201ENST00000450125 223 ntBASIC0.95□□□□□ -2.26
CLIP4Q8N3C7 AC067940.1-201ENST00000458411 300 ntBASIC0.95□□□□□ -2.26
CLIP4Q8N3C7 MIR4676-201ENST00000583078 72 ntBASIC0.95□□□□□ -2.26
CLIP4Q8N3C7 MIR450A1-201ENST00000362262 91 ntBASIC0.94□□□□□ -2.26
CLIP4Q8N3C7 RNU6-1313P-201ENST00000362622 102 ntBASIC0.94□□□□□ -2.26
CLIP4Q8N3C7 RNY3P2-201ENST00000362918 102 ntBASIC0.94□□□□□ -2.26
CLIP4Q8N3C7 Y_RNA.119-201ENST00000363301 96 ntBASIC0.94□□□□□ -2.26
CLIP4Q8N3C7 RPS27-201ENST00000368567 350 ntAPPRIS P1 TSL 1 (best) BASIC0.94□□□□□ -2.26
CLIP4Q8N3C7 RNU6-756P-201ENST00000383997 107 ntBASIC0.94□□□□□ -2.26
CLIP4Q8N3C7 SNORA51.5-201ENST00000384126 131 ntBASIC0.94□□□□□ -2.26
CLIP4Q8N3C7 RNU6-1201P-201ENST00000384227 107 ntBASIC0.94□□□□□ -2.26
CLIP4Q8N3C7 Y_RNA.588-201ENST00000391254 102 ntBASIC0.94□□□□□ -2.26
CLIP4Q8N3C7 AC012668.1-201ENST00000457625 228 ntTSL 3 BASIC0.94□□□□□ -2.26
CLIP4Q8N3C7 SNORD124-201ENST00000459577 104 ntBASIC0.94□□□□□ -2.26
CLIP4Q8N3C7 RNU6-977P-201ENST00000516411 103 ntBASIC0.94□□□□□ -2.26
CLIP4Q8N3C7 RNU7-156P-201ENST00000517214 74 ntBASIC0.94□□□□□ -2.26
CLIP4Q8N3C7 DEFB131E-201ENST00000532329 154 ntBASIC0.94□□□□□ -2.26
CLIP4Q8N3C7 AC141557.1-201ENST00000540982 400 ntBASIC0.94□□□□□ -2.26
CLIP4Q8N3C7 MIR4694-201ENST00000578534 80 ntBASIC0.94□□□□□ -2.26
CLIP4Q8N3C7 AL442128.1-201ENST00000615151 90 ntBASIC0.94□□□□□ -2.26
CLIP4Q8N3C7 AP001362.1-201ENST00000625165 124 ntBASIC0.94□□□□□ -2.26
CLIP4Q8N3C7 RNU6-369P-201ENST00000362515 102 ntBASIC0.93□□□□□ -2.26
CLIP4Q8N3C7 RNU6-832P-201ENST00000363319 107 ntBASIC0.93□□□□□ -2.26
CLIP4Q8N3C7 SNORA25.9-201ENST00000365087 128 ntBASIC0.93□□□□□ -2.26
CLIP4Q8N3C7 RNU6-53P-201ENST00000365367 106 ntBASIC0.93□□□□□ -2.26
CLIP4Q8N3C7 RNU6-147P-201ENST00000383983 107 ntBASIC0.93□□□□□ -2.26
CLIP4Q8N3C7 RNU6-1113P-201ENST00000384348 107 ntBASIC0.93□□□□□ -2.26
CLIP4Q8N3C7 SNORA72.6-201ENST00000384520 129 ntBASIC0.93□□□□□ -2.26
CLIP4Q8N3C7 TRAJ1-201ENST00000390536 62 ntAPPRIS P1 BASIC0.93□□□□□ -2.26
CLIP4Q8N3C7 SNORA19.1-201ENST00000410656 129 ntBASIC0.93□□□□□ -2.26
CLIP4Q8N3C7 RPL39P28-201ENST00000465655 155 ntBASIC0.93□□□□□ -2.26
CLIP4Q8N3C7 SNORA25.16-201ENST00000516741 121 ntBASIC0.93□□□□□ -2.26
CLIP4Q8N3C7 MIR4500-201ENST00000579472 76 ntBASIC0.93□□□□□ -2.26
CLIP4Q8N3C7 NFIA-AS1-206ENST00000630199 220 ntTSL 5 BASIC0.93□□□□□ -2.26
CLIP4Q8N3C7 Y_RNA.78-201ENST00000362970 110 ntBASIC0.92□□□□□ -2.26
CLIP4Q8N3C7 RNU4-36P-201ENST00000364294 144 ntBASIC0.92□□□□□ -2.26
CLIP4Q8N3C7 Y_RNA.226-201ENST00000364337 114 ntBASIC0.92□□□□□ -2.26
CLIP4Q8N3C7 RNU6-153P-201ENST00000364422 104 ntBASIC0.92□□□□□ -2.26
CLIP4Q8N3C7 RNU4-38P-201ENST00000364472 129 ntBASIC0.92□□□□□ -2.26
CLIP4Q8N3C7 Y_RNA.247-201ENST00000364500 92 ntBASIC0.92□□□□□ -2.26
CLIP4Q8N3C7 RNU6-364P-201ENST00000384387 107 ntBASIC0.92□□□□□ -2.26
CLIP4Q8N3C7 SNORD89-201ENST00000390981 114 ntBASIC0.92□□□□□ -2.26
CLIP4Q8N3C7 MIR938-201ENST00000401216 83 ntBASIC0.92□□□□□ -2.26
CLIP4Q8N3C7 AC087343.1-201ENST00000477341 475 ntBASIC0.92□□□□□ -2.26
CLIP4Q8N3C7 RNU6-531P-201ENST00000516694 104 ntBASIC0.92□□□□□ -2.26
CLIP4Q8N3C7 MIR3613-201ENST00000579844 87 ntBASIC0.92□□□□□ -2.26
CLIP4Q8N3C7 MIR4804-201ENST00000581683 73 ntBASIC0.92□□□□□ -2.26
CLIP4Q8N3C7 DENND4A-209ENST00000635620 5887 ntTSL 5 BASIC0.92□□□□□ -2.26
CLIP4Q8N3C7 Y_RNA.13-201ENST00000362403 112 ntBASIC0.91□□□□□ -2.26
CLIP4Q8N3C7 RNU6-766P-201ENST00000362478 107 ntBASIC0.91□□□□□ -2.26
CLIP4Q8N3C7 SNORD38.1-201ENST00000363863 68 ntBASIC0.91□□□□□ -2.26
Retrieved 100 of 98,524 protein–RNA pairs in 180.1 ms