Protein–RNA interactions for Protein: Q8IWZ4

TRIM48, Tripartite motif-containing protein 48, humanhuman

Predictions only

Length 208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM48Q8IWZ4 TFEC-204ENST00000457268 6309 ntTSL 3 BASIC1.56□□□□□ -2.16
TRIM48Q8IWZ4 Y_RNA.190-201ENST00000363964 101 ntBASIC1.55□□□□□ -2.16
TRIM48Q8IWZ4 RNY1P2-201ENST00000364820 117 ntBASIC1.55□□□□□ -2.16
TRIM48Q8IWZ4 MT-TF-201ENST00000387314 71 ntBASIC1.55□□□□□ -2.16
TRIM48Q8IWZ4 RNU6-910P-201ENST00000390844 107 ntBASIC1.55□□□□□ -2.16
TRIM48Q8IWZ4 SNORA67.6-201ENST00000391093 99 ntBASIC1.55□□□□□ -2.16
TRIM48Q8IWZ4 SNORD93-201ENST00000408813 74 ntBASIC1.55□□□□□ -2.16
TRIM48Q8IWZ4 AC036111.3-201ENST00000526389 112 ntBASIC1.55□□□□□ -2.16
TRIM48Q8IWZ4 ST7-AS2_1.1-201ENST00000622900 72 ntBASIC1.55□□□□□ -2.16
TRIM48Q8IWZ4 AC008163.1-205ENST00000413944 4649 ntTSL 1 (best) BASIC1.55□□□□□ -2.16
TRIM48Q8IWZ4 SLC9C2-201ENST00000367714 4428 ntAPPRIS P1 TSL 1 (best) BASIC1.54□□□□□ -2.16
TRIM48Q8IWZ4 Y_RNA.119-201ENST00000363301 96 ntBASIC1.54□□□□□ -2.16
TRIM48Q8IWZ4 RNU6-813P-201ENST00000384691 107 ntBASIC1.54□□□□□ -2.16
TRIM48Q8IWZ4 Y_RNA.567-201ENST00000384736 106 ntBASIC1.54□□□□□ -2.16
TRIM48Q8IWZ4 TRAJ1-201ENST00000390536 62 ntAPPRIS P1 BASIC1.54□□□□□ -2.16
TRIM48Q8IWZ4 RNU1-98P-201ENST00000458992 160 ntBASIC1.54□□□□□ -2.16
TRIM48Q8IWZ4 Y_RNA.705-201ENST00000516862 110 ntBASIC1.54□□□□□ -2.16
TRIM48Q8IWZ4 AC103810.7-201ENST00000607821 91 ntBASIC1.54□□□□□ -2.16
TRIM48Q8IWZ4 ABCA5-201ENST00000392676 8220 ntAPPRIS P1 TSL 1 (best) BASIC1.54□□□□□ -2.16
TRIM48Q8IWZ4 CEP162-201ENST00000257766 5063 ntTSL 1 (best) BASIC1.53□□□□□ -2.16
TRIM48Q8IWZ4 MIR378A-201ENST00000362177 66 ntBASIC1.53□□□□□ -2.16
TRIM48Q8IWZ4 SNORD73B-201ENST00000364394 72 ntBASIC1.53□□□□□ -2.16
TRIM48Q8IWZ4 SNORD113.3-201ENST00000364630 78 ntBASIC1.53□□□□□ -2.16
TRIM48Q8IWZ4 SNORD38.2-201ENST00000384470 69 ntBASIC1.53□□□□□ -2.16
TRIM48Q8IWZ4 SNORA17.3-201ENST00000391159 129 ntBASIC1.53□□□□□ -2.16
TRIM48Q8IWZ4 SNORA25.16-201ENST00000516741 121 ntBASIC1.53□□□□□ -2.16
TRIM48Q8IWZ4 AC023934.1-201ENST00000574529 2389 ntBASIC1.53□□□□□ -2.16
TRIM48Q8IWZ4 MIR4285-201ENST00000581001 85 ntBASIC1.53□□□□□ -2.16
TRIM48Q8IWZ4 MIR4491-201ENST00000581087 68 ntBASIC1.53□□□□□ -2.16
TRIM48Q8IWZ4 AC022596.1-201ENST00000582895 302 ntTSL 5 BASIC1.53□□□□□ -2.16
TRIM48Q8IWZ4 RNU6-403P-201ENST00000363163 104 ntBASIC1.52□□□□□ -2.17
TRIM48Q8IWZ4 SNORA72.6-201ENST00000384520 129 ntBASIC1.52□□□□□ -2.17
TRIM48Q8IWZ4 MIR517C-201ENST00000385103 95 ntBASIC1.52□□□□□ -2.17
TRIM48Q8IWZ4 RNU6ATAC6P-201ENST00000408132 126 ntBASIC1.52□□□□□ -2.17
TRIM48Q8IWZ4 RNU6ATAC8P-201ENST00000408460 126 ntBASIC1.52□□□□□ -2.17
TRIM48Q8IWZ4 RNU6-887P-201ENST00000410660 100 ntBASIC1.52□□□□□ -2.17
TRIM48Q8IWZ4 BX276092.1-201ENST00000427368 251 ntBASIC1.52□□□□□ -2.17
TRIM48Q8IWZ4 MIR18B-201ENST00000454574 71 ntBASIC1.52□□□□□ -2.17
TRIM48Q8IWZ4 COX7A2-206ENST00000472311 325 ntTSL 2 BASIC1.52□□□□□ -2.17
TRIM48Q8IWZ4 AC026421.1-201ENST00000519101 163 ntBASIC1.52□□□□□ -2.17
TRIM48Q8IWZ4 MIR4303-201ENST00000581299 66 ntBASIC1.52□□□□□ -2.17
TRIM48Q8IWZ4 MIR4439-201ENST00000583746 80 ntBASIC1.52□□□□□ -2.17
TRIM48Q8IWZ4 5S_rRNA.15-201ENST00000611169 127 ntBASIC1.52□□□□□ -2.17
TRIM48Q8IWZ4 UBE3A-225ENST00000636667 5726 ntTSL 5 BASIC1.52□□□□□ -2.17
TRIM48Q8IWZ4 ZNF260-203ENST00000588993 4174 ntAPPRIS P1 TSL 1 (best) BASIC1.52□□□□□ -2.17
TRIM48Q8IWZ4 ZNF260-205ENST00000593142 4047 ntAPPRIS P1 TSL 1 (best) BASIC1.51□□□□□ -2.17
TRIM48Q8IWZ4 RNU1-42P-201ENST00000364033 160 ntBASIC1.51□□□□□ -2.17
TRIM48Q8IWZ4 RNU1-36P-201ENST00000365130 165 ntBASIC1.51□□□□□ -2.17
TRIM48Q8IWZ4 RNU6-934P-201ENST00000365154 107 ntBASIC1.51□□□□□ -2.17
TRIM48Q8IWZ4 AL591704.2-201ENST00000421658 181 ntBASIC1.51□□□□□ -2.17
TRIM48Q8IWZ4 AC023790.1-201ENST00000482174 347 ntBASIC1.51□□□□□ -2.17
TRIM48Q8IWZ4 RNU6-531P-201ENST00000516694 104 ntBASIC1.51□□□□□ -2.17
TRIM48Q8IWZ4 RNU6-762P-201ENST00000517107 102 ntBASIC1.51□□□□□ -2.17
TRIM48Q8IWZ4 AC020891.4-201ENST00000605745 93 ntBASIC1.51□□□□□ -2.17
TRIM48Q8IWZ4 AL512598.1-201ENST00000610158 273 ntBASIC1.51□□□□□ -2.17
TRIM48Q8IWZ4 PPP1R3A-201ENST00000284601 4384 ntAPPRIS P1 TSL 1 (best) BASIC1.5□□□□□ -2.17
TRIM48Q8IWZ4 RNU6-1244P-201ENST00000363614 108 ntBASIC1.5□□□□□ -2.17
TRIM48Q8IWZ4 RNU6-1134P-201ENST00000365156 101 ntBASIC1.5□□□□□ -2.17
TRIM48Q8IWZ4 RNU6-997P-201ENST00000384725 107 ntBASIC1.5□□□□□ -2.17
TRIM48Q8IWZ4 RNU6ATAC2P-201ENST00000387943 126 ntBASIC1.5□□□□□ -2.17
TRIM48Q8IWZ4 RNU6-972P-201ENST00000391208 107 ntBASIC1.5□□□□□ -2.17
TRIM48Q8IWZ4 Y_RNA.588-201ENST00000391254 102 ntBASIC1.5□□□□□ -2.17
TRIM48Q8IWZ4 RNU7-185P-201ENST00000459215 60 ntBASIC1.5□□□□□ -2.17
TRIM48Q8IWZ4 RNU7-21P-201ENST00000459430 62 ntBASIC1.5□□□□□ -2.17
TRIM48Q8IWZ4 RNU1-92P-201ENST00000517017 135 ntBASIC1.5□□□□□ -2.17
TRIM48Q8IWZ4 SNORA31.24-201ENST00000517232 57 ntBASIC1.5□□□□□ -2.17
TRIM48Q8IWZ4 MIR4771-2-201ENST00000577758 74 ntBASIC1.5□□□□□ -2.17
TRIM48Q8IWZ4 MIR4771-1-201ENST00000582617 74 ntBASIC1.5□□□□□ -2.17
TRIM48Q8IWZ4 AC008163.1-202ENST00000636004 2889 ntBASIC1.49□□□□□ -2.17
TRIM48Q8IWZ4 Y_RNA.173-201ENST00000363776 113 ntBASIC1.49□□□□□ -2.17
TRIM48Q8IWZ4 Y_RNA.338-201ENST00000365320 114 ntBASIC1.49□□□□□ -2.17
TRIM48Q8IWZ4 SNORD58A-201ENST00000383875 65 ntBASIC1.49□□□□□ -2.17
TRIM48Q8IWZ4 RNU4-62P-201ENST00000410125 130 ntBASIC1.49□□□□□ -2.17
TRIM48Q8IWZ4 AL603825.1-201ENST00000438481 80 ntBASIC1.49□□□□□ -2.17
TRIM48Q8IWZ4 NPAT-201ENST00000278612 6117 ntAPPRIS P2 TSL 1 (best) BASIC1.48□□□□□ -2.17
TRIM48Q8IWZ4 HSBP1P2-201ENST00000299671 229 ntBASIC1.48□□□□□ -2.17
TRIM48Q8IWZ4 Y_RNA.96-201ENST00000363092 109 ntBASIC1.48□□□□□ -2.17
TRIM48Q8IWZ4 SNORA80D-201ENST00000384488 135 ntBASIC1.48□□□□□ -2.17
TRIM48Q8IWZ4 MIR181B2-201ENST00000385004 89 ntBASIC1.48□□□□□ -2.17
TRIM48Q8IWZ4 MIR1323-201ENST00000408090 73 ntBASIC1.48□□□□□ -2.17
TRIM48Q8IWZ4 MIR1304-201ENST00000408243 91 ntBASIC1.48□□□□□ -2.17
TRIM48Q8IWZ4 MIR1257-201ENST00000408490 117 ntBASIC1.48□□□□□ -2.17
TRIM48Q8IWZ4 RNU4-83P-201ENST00000410863 133 ntBASIC1.48□□□□□ -2.17
TRIM48Q8IWZ4 SNORD79.1-201ENST00000516069 84 ntBASIC1.48□□□□□ -2.17
TRIM48Q8IWZ4 AL645939.4-201ENST00000604495 135 ntBASIC1.48□□□□□ -2.17
TRIM48Q8IWZ4 AC106800.4-201ENST00000614905 153 ntBASIC1.48□□□□□ -2.17
TRIM48Q8IWZ4 GNAS-AS1_4.1-201ENST00000616546 112 ntBASIC1.48□□□□□ -2.17
TRIM48Q8IWZ4 Y_RNA.558-201ENST00000384685 113 ntBASIC1.47□□□□□ -2.17
TRIM48Q8IWZ4 RNU7-40P-201ENST00000516397 64 ntBASIC1.47□□□□□ -2.17
TRIM48Q8IWZ4 SNORA70.22-201ENST00000517160 124 ntBASIC1.47□□□□□ -2.17
TRIM48Q8IWZ4 KTN1-205ENST00000395314 4618 ntAPPRIS P4 TSL 1 (best) BASIC1.47□□□□□ -2.17
TRIM48Q8IWZ4 SNORD111-201ENST00000408139 94 ntBASIC1.46□□□□□ -2.18
TRIM48Q8IWZ4 AL354695.1-201ENST00000427935 228 ntBASIC1.46□□□□□ -2.18
TRIM48Q8IWZ4 RNU7-90P-201ENST00000459216 62 ntBASIC1.46□□□□□ -2.18
TRIM48Q8IWZ4 RNU6-850P-201ENST00000516934 103 ntBASIC1.46□□□□□ -2.18
TRIM48Q8IWZ4 AC025521.1-201ENST00000621624 286 ntBASIC1.46□□□□□ -2.18
TRIM48Q8IWZ4 RNA5SP327-201ENST00000362494 101 ntBASIC1.45□□□□□ -2.18
TRIM48Q8IWZ4 RPS27-201ENST00000368567 350 ntAPPRIS P1 TSL 1 (best) BASIC1.45□□□□□ -2.18
TRIM48Q8IWZ4 AC013244.2-201ENST00000603396 103 ntBASIC1.45□□□□□ -2.18
TRIM48Q8IWZ4 HIF1A-204ENST00000539097 3956 ntTSL 1 (best) BASIC1.45□□□□□ -2.18
Retrieved 100 of 98,524 protein–RNA pairs in 296.1 ms