Protein–RNA interactions for Protein: Q8IUM7

NPAS4, Neuronal PAS domain-containing protein 4, humanhuman

Predictions only

Length 802 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS4Q8IUM7 ST7-AS2_1.1-201ENST00000622900 72 ntBASIC2.07□□□□□ -2.08
NPAS4Q8IUM7 AP001362.1-201ENST00000625165 124 ntBASIC2.07□□□□□ -2.08
NPAS4Q8IUM7 LRRCC1-202ENST00000414626 4493 ntAPPRIS ALT2 TSL 1 (best) BASIC2.07□□□□□ -2.08
NPAS4Q8IUM7 C9orf84-205ENST00000394779 5060 ntAPPRIS ALT2 TSL 2 BASIC2.06□□□□□ -2.08
NPAS4Q8IUM7 USP53-202ENST00000450251 6072 ntAPPRIS P1 TSL 5 BASIC2.06□□□□□ -2.08
NPAS4Q8IUM7 SNORA2B-201ENST00000384583 137 ntBASIC2.06□□□□□ -2.08
NPAS4Q8IUM7 Y_RNA.607-201ENST00000410597 98 ntBASIC2.06□□□□□ -2.08
NPAS4Q8IUM7 AC003989.2-201ENST00000440224 169 ntBASIC2.06□□□□□ -2.08
NPAS4Q8IUM7 RN7SL274P-201ENST00000492268 272 ntBASIC2.06□□□□□ -2.08
NPAS4Q8IUM7 PRELID3BP2-201ENST00000605362 201 ntBASIC2.06□□□□□ -2.08
NPAS4Q8IUM7 PPP1R3A-201ENST00000284601 4384 ntAPPRIS P1 TSL 1 (best) BASIC2.05□□□□□ -2.08
NPAS4Q8IUM7 RNA5SP264-201ENST00000363115 107 ntBASIC2.05□□□□□ -2.08
NPAS4Q8IUM7 SNORA25.3-201ENST00000363205 127 ntBASIC2.05□□□□□ -2.08
NPAS4Q8IUM7 RNU4-52P-201ENST00000384209 138 ntBASIC2.05□□□□□ -2.08
NPAS4Q8IUM7 RNU6-524P-201ENST00000384270 107 ntBASIC2.05□□□□□ -2.08
NPAS4Q8IUM7 RNU6-24P-201ENST00000384440 107 ntBASIC2.05□□□□□ -2.08
NPAS4Q8IUM7 RNU6ATAC2P-201ENST00000387943 126 ntBASIC2.05□□□□□ -2.08
NPAS4Q8IUM7 AC108667.1-201ENST00000428618 249 ntBASIC2.05□□□□□ -2.08
NPAS4Q8IUM7 AL662814.1-201ENST00000617364 121 ntBASIC2.05□□□□□ -2.08
NPAS4Q8IUM7 C16orf97-206ENST00000622950 415 ntTSL 2 BASIC2.05□□□□□ -2.08
NPAS4Q8IUM7 AL161932.1-201ENST00000437408 146 ntBASIC2.04□□□□□ -2.08
NPAS4Q8IUM7 AC133485.1-201ENST00000567176 124 ntBASIC2.04□□□□□ -2.08
NPAS4Q8IUM7 MIR4498-201ENST00000577599 66 ntBASIC2.04□□□□□ -2.08
NPAS4Q8IUM7 MIR4264-201ENST00000583520 66 ntBASIC2.04□□□□□ -2.08
NPAS4Q8IUM7 SLC9C2-201ENST00000367714 4428 ntAPPRIS P1 TSL 1 (best) BASIC2.04□□□□□ -2.08
NPAS4Q8IUM7 Y_RNA.316-201ENST00000365118 111 ntBASIC2.03□□□□□ -2.08
NPAS4Q8IUM7 RNU6-480P-201ENST00000384332 107 ntBASIC2.03□□□□□ -2.08
NPAS4Q8IUM7 AC025033.1-201ENST00000463883 194 ntBASIC2.03□□□□□ -2.08
NPAS4Q8IUM7 SNORA25.15-201ENST00000516487 89 ntBASIC2.03□□□□□ -2.08
NPAS4Q8IUM7 RNU6-165P-201ENST00000517170 99 ntBASIC2.03□□□□□ -2.08
NPAS4Q8IUM7 AC084768.2-201ENST00000622736 221 ntBASIC2.03□□□□□ -2.08
NPAS4Q8IUM7 NPAT-201ENST00000278612 6117 ntAPPRIS P2 TSL 1 (best) BASIC2.03□□□□□ -2.09
NPAS4Q8IUM7 RNA5SP160-201ENST00000364866 120 ntBASIC2.02□□□□□ -2.09
NPAS4Q8IUM7 RNA5SP190-201ENST00000365222 118 ntBASIC2.02□□□□□ -2.09
NPAS4Q8IUM7 MIR9-3-201ENST00000385084 90 ntBASIC2.02□□□□□ -2.09
NPAS4Q8IUM7 MT-TN-201ENST00000387400 73 ntBASIC2.02□□□□□ -2.09
NPAS4Q8IUM7 SNORA17.3-201ENST00000391159 129 ntBASIC2.02□□□□□ -2.09
NPAS4Q8IUM7 RNU6ATAC42P-201ENST00000408637 95 ntBASIC2.02□□□□□ -2.09
NPAS4Q8IUM7 RNU6-1054P-201ENST00000411293 104 ntBASIC2.02□□□□□ -2.09
NPAS4Q8IUM7 RNU1-40P-201ENST00000516816 164 ntBASIC2.02□□□□□ -2.09
NPAS4Q8IUM7 RNU1-97P-201ENST00000516872 164 ntBASIC2.02□□□□□ -2.09
NPAS4Q8IUM7 AC090897.1-201ENST00000580909 226 ntBASIC2.02□□□□□ -2.09
NPAS4Q8IUM7 LINC00643-201ENST00000334389 3247 ntTSL 2 BASIC2.02□□□□□ -2.09
NPAS4Q8IUM7 RNU6-949P-201ENST00000384040 107 ntBASIC2.01□□□□□ -2.09
NPAS4Q8IUM7 MIR519C-201ENST00000385053 87 ntBASIC2.01□□□□□ -2.09
NPAS4Q8IUM7 snoU13.2-201ENST00000459201 104 ntBASIC2.01□□□□□ -2.09
NPAS4Q8IUM7 RPS29P11-201ENST00000496507 171 ntBASIC2.01□□□□□ -2.09
NPAS4Q8IUM7 HSBP1P2-201ENST00000299671 229 ntBASIC2□□□□□ -2.09
NPAS4Q8IUM7 Y_RNA.94-201ENST00000363068 106 ntBASIC2□□□□□ -2.09
NPAS4Q8IUM7 MIR588-201ENST00000384900 83 ntBASIC2□□□□□ -2.09
NPAS4Q8IUM7 MIR1302-7-201ENST00000408841 72 ntBASIC2□□□□□ -2.09
NPAS4Q8IUM7 RNU4-83P-201ENST00000410863 133 ntBASIC2□□□□□ -2.09
NPAS4Q8IUM7 SNORD13-201ENST00000459299 104 ntBASIC2□□□□□ -2.09
NPAS4Q8IUM7 RNU6-1053P-201ENST00000515930 101 ntBASIC2□□□□□ -2.09
NPAS4Q8IUM7 SNORA31.2-201ENST00000516019 134 ntBASIC2□□□□□ -2.09
NPAS4Q8IUM7 MIR4500-201ENST00000579472 76 ntBASIC2□□□□□ -2.09
NPAS4Q8IUM7 CERS6-AS1-202ENST00000594898 499 ntTSL 5 BASIC2□□□□□ -2.09
NPAS4Q8IUM7 PTPRQ-208ENST00000614701 8289 ntAPPRIS P1 TSL 5 BASIC2□□□□□ -2.09
NPAS4Q8IUM7 PI15-201ENST00000260113 6732 ntAPPRIS P1 TSL 1 (best) BASIC1.99□□□□□ -2.09
NPAS4Q8IUM7 Y_RNA.168-201ENST00000363740 102 ntBASIC1.99□□□□□ -2.09
NPAS4Q8IUM7 RNY1P2-201ENST00000364820 117 ntBASIC1.99□□□□□ -2.09
NPAS4Q8IUM7 RNU6-1296P-201ENST00000383879 107 ntBASIC1.99□□□□□ -2.09
NPAS4Q8IUM7 AC093729.1-201ENST00000513074 128 ntBASIC1.99□□□□□ -2.09
NPAS4Q8IUM7 AC138749.4-201ENST00000563970 127 ntBASIC1.99□□□□□ -2.09
NPAS4Q8IUM7 MIR4448-201ENST00000584360 86 ntBASIC1.99□□□□□ -2.09
NPAS4Q8IUM7 CYP19A1-220ENST00000613097 123 ntTSL 5 BASIC1.99□□□□□ -2.09
NPAS4Q8IUM7 MIR6740-201ENST00000618268 113 ntBASIC1.99□□□□□ -2.09
NPAS4Q8IUM7 KIAA1551-201ENST00000312561 6230 ntAPPRIS P1 TSL 1 (best) BASIC1.99□□□□□ -2.09
NPAS4Q8IUM7 SI-201ENST00000264382 6011 ntAPPRIS P1 TSL 1 (best) BASIC1.98□□□□□ -2.09
NPAS4Q8IUM7 Y_RNA.164-201ENST00000363709 102 ntBASIC1.98□□□□□ -2.09
NPAS4Q8IUM7 RNU6-519P-201ENST00000410590 108 ntBASIC1.98□□□□□ -2.09
NPAS4Q8IUM7 RNA5SP247-201ENST00000411181 105 ntBASIC1.98□□□□□ -2.09
NPAS4Q8IUM7 AL353795.2-201ENST00000431804 425 ntTSL 2 BASIC1.98□□□□□ -2.09
NPAS4Q8IUM7 AC087499.7-201ENST00000441958 109 ntBASIC1.98□□□□□ -2.09
NPAS4Q8IUM7 RNU7-153P-201ENST00000516455 62 ntBASIC1.98□□□□□ -2.09
NPAS4Q8IUM7 AP003716.2-201ENST00000528260 108 ntBASIC1.98□□□□□ -2.09
NPAS4Q8IUM7 AC019288.1-201ENST00000557918 224 ntBASIC1.98□□□□□ -2.09
NPAS4Q8IUM7 ZNF260-203ENST00000588993 4174 ntAPPRIS P1 TSL 1 (best) BASIC1.98□□□□□ -2.09
NPAS4Q8IUM7 TEX15-203ENST00000638951 11341 ntAPPRIS P1 TSL 5 BASIC1.97□□□□□ -2.09
NPAS4Q8IUM7 MIR377-201ENST00000362145 69 ntBASIC1.97□□□□□ -2.09
NPAS4Q8IUM7 RNA5SP133-201ENST00000363368 119 ntBASIC1.97□□□□□ -2.09
NPAS4Q8IUM7 RNU6-776P-201ENST00000364403 104 ntBASIC1.97□□□□□ -2.09
NPAS4Q8IUM7 RNU6-1022P-201ENST00000365049 104 ntBASIC1.97□□□□□ -2.09
NPAS4Q8IUM7 MIR889-201ENST00000401280 79 ntBASIC1.97□□□□□ -2.09
NPAS4Q8IUM7 snoU13.25-201ENST00000458945 104 ntBASIC1.97□□□□□ -2.09
NPAS4Q8IUM7 snoU13.31-201ENST00000607291 104 ntBASIC1.97□□□□□ -2.09
NPAS4Q8IUM7 U6.109-201ENST00000636749 87 ntBASIC1.97□□□□□ -2.09
NPAS4Q8IUM7 MIR4662A-201ENST00000637499 67 ntBASIC1.97□□□□□ -2.09
NPAS4Q8IUM7 MIER3-204ENST00000381226 5210 ntAPPRIS ALT1 TSL 1 (best) BASIC1.96□□□□□ -2.1
NPAS4Q8IUM7 MIR378A-201ENST00000362177 66 ntBASIC1.96□□□□□ -2.1
NPAS4Q8IUM7 TRAJ61-201ENST00000390479 60 ntAPPRIS P1 BASIC1.96□□□□□ -2.1
NPAS4Q8IUM7 RNU6-205P-201ENST00000390858 107 ntBASIC1.96□□□□□ -2.1
NPAS4Q8IUM7 MIR1185-1-201ENST00000408598 86 ntBASIC1.96□□□□□ -2.1
NPAS4Q8IUM7 AC048334.1-201ENST00000477975 159 ntBASIC1.96□□□□□ -2.1
NPAS4Q8IUM7 RNU6-65P-201ENST00000516332 98 ntBASIC1.96□□□□□ -2.1
NPAS4Q8IUM7 MIR4255-201ENST00000579351 72 ntBASIC1.96□□□□□ -2.1
NPAS4Q8IUM7 MIR8081-201ENST00000611533 95 ntBASIC1.96□□□□□ -2.1
NPAS4Q8IUM7 MIR8066-201ENST00000617280 78 ntBASIC1.96□□□□□ -2.1
NPAS4Q8IUM7 XIRP2-201ENST00000295237 5246 ntTSL 2 BASIC1.96□□□□□ -2.1
NPAS4Q8IUM7 ZNF654-201ENST00000309495 4957 ntAPPRIS P2 TSL 1 (best) BASIC1.95□□□□□ -2.1
Retrieved 100 of 98,524 protein–RNA pairs in 279.9 ms