Protein–RNA interactions for Protein: Q86TL0

ATG4D, Cysteine protease ATG4D, humanhuman

Predicted RBP Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4DQ86TL0 RNU6-800P-201ENST00000384473 103 ntBASIC1.96□□□□□ -2.1
ATG4DQ86TL0 RNU6-1241P-201ENST00000384536 107 ntBASIC1.96□□□□□ -2.1
ATG4DQ86TL0 SNORA64-201ENST00000384674 134 ntBASIC1.96□□□□□ -2.1
ATG4DQ86TL0 RNU2-59P-201ENST00000410482 191 ntBASIC1.96□□□□□ -2.1
ATG4DQ86TL0 SNORD63B-201ENST00000411005 70 ntBASIC1.96□□□□□ -2.1
ATG4DQ86TL0 AC035139.1-201ENST00000423256 273 ntTSL 3 BASIC1.96□□□□□ -2.1
ATG4DQ86TL0 GHRL-208ENST00000439975 326 ntTSL 1 (best) BASIC1.96□□□□□ -2.1
ATG4DQ86TL0 MIR4648-201ENST00000580107 72 ntBASIC1.96□□□□□ -2.1
ATG4DQ86TL0 MIR5002-201ENST00000584713 97 ntBASIC1.96□□□□□ -2.1
ATG4DQ86TL0 AL357312.1-201ENST00000603879 298 ntBASIC1.96□□□□□ -2.1
ATG4DQ86TL0 AC034238.1-213ENST00000611148 150 ntTSL 5 BASIC1.96□□□□□ -2.1
ATG4DQ86TL0 MIR6873-201ENST00000622788 63 ntBASIC1.96□□□□□ -2.1
ATG4DQ86TL0 TAB2-205ENST00000538427 4240 ntAPPRIS P1 TSL 5 BASIC1.96□□□□□ -2.1
ATG4DQ86TL0 NEDD4-205ENST00000506154 6751 ntTSL 1 (best) BASIC1.96□□□□□ -2.1
ATG4DQ86TL0 RNU6-396P-201ENST00000365369 105 ntBASIC1.95□□□□□ -2.1
ATG4DQ86TL0 MIR154-201ENST00000385243 84 ntBASIC1.95□□□□□ -2.1
ATG4DQ86TL0 MIR518E-201ENST00000385252 88 ntBASIC1.95□□□□□ -2.1
ATG4DQ86TL0 RNA5SP270-201ENST00000411361 118 ntBASIC1.95□□□□□ -2.1
ATG4DQ86TL0 AL356320.1-201ENST00000429616 163 ntBASIC1.95□□□□□ -2.1
ATG4DQ86TL0 RNU7-62P-201ENST00000458856 62 ntBASIC1.95□□□□□ -2.1
ATG4DQ86TL0 MIR1273D-201ENST00000577266 86 ntBASIC1.95□□□□□ -2.1
ATG4DQ86TL0 U6.111-201ENST00000636093 83 ntBASIC1.95□□□□□ -2.1
ATG4DQ86TL0 KPNA5-202ENST00000368564 11311 ntAPPRIS P1 TSL 1 (best) BASIC1.95□□□□□ -2.1
ATG4DQ86TL0 PRKD3-201ENST00000234179 5900 ntAPPRIS P1 TSL 1 (best) BASIC1.95□□□□□ -2.1
ATG4DQ86TL0 SNORA8.1-201ENST00000384250 140 ntBASIC1.94□□□□□ -2.1
ATG4DQ86TL0 U8.13-201ENST00000390842 128 ntBASIC1.94□□□□□ -2.1
ATG4DQ86TL0 MIR1289-2-201ENST00000408360 111 ntBASIC1.94□□□□□ -2.1
ATG4DQ86TL0 RNA5SP450-201ENST00000411206 102 ntBASIC1.94□□□□□ -2.1
ATG4DQ86TL0 snoU13.26-201ENST00000459452 105 ntBASIC1.94□□□□□ -2.1
ATG4DQ86TL0 YWHAEP2-201ENST00000580066 112 ntBASIC1.94□□□□□ -2.1
ATG4DQ86TL0 MIR4491-201ENST00000581087 68 ntBASIC1.94□□□□□ -2.1
ATG4DQ86TL0 YWHAEP3-201ENST00000582767 121 ntBASIC1.94□□□□□ -2.1
ATG4DQ86TL0 AC104984.5-201ENST00000586878 94 ntBASIC1.94□□□□□ -2.1
ATG4DQ86TL0 ZNF209P-201ENST00000593450 2304 ntBASIC1.94□□□□□ -2.1
ATG4DQ86TL0 SAGE1-201ENST00000324447 2952 ntAPPRIS P2 TSL 5 BASIC1.93□□□□□ -2.1
ATG4DQ86TL0 MIR513A1-201ENST00000385138 129 ntBASIC1.93□□□□□ -2.1
ATG4DQ86TL0 snoU13.25-201ENST00000458945 104 ntBASIC1.93□□□□□ -2.1
ATG4DQ86TL0 MIR4264-201ENST00000583520 66 ntBASIC1.93□□□□□ -2.1
ATG4DQ86TL0 KNL1-204ENST00000527044 5404 ntTSL 5 BASIC1.93□□□□□ -2.1
ATG4DQ86TL0 OR2L2-202ENST00000641771 4300 ntAPPRIS P1 BASIC1.93□□□□□ -2.1
ATG4DQ86TL0 KIAA1551-201ENST00000312561 6230 ntAPPRIS P1 TSL 1 (best) BASIC1.93□□□□□ -2.1
ATG4DQ86TL0 ZBBX-205ENST00000455345 3185 ntAPPRIS ALT2 TSL 1 (best) BASIC1.92□□□□□ -2.1
ATG4DQ86TL0 Y_RNA.371-201ENST00000365591 113 ntBASIC1.92□□□□□ -2.1
ATG4DQ86TL0 RNU6-663P-201ENST00000391105 106 ntBASIC1.92□□□□□ -2.1
ATG4DQ86TL0 AL606490.4-201ENST00000423117 127 ntBASIC1.92□□□□□ -2.1
ATG4DQ86TL0 RNU7-195P-201ENST00000458793 62 ntBASIC1.92□□□□□ -2.1
ATG4DQ86TL0 snoU13.15-201ENST00000459407 104 ntBASIC1.92□□□□□ -2.1
ATG4DQ86TL0 AC079804.2-201ENST00000490376 200 ntBASIC1.92□□□□□ -2.1
ATG4DQ86TL0 TRAJ36-201ENST00000614481 58 ntAPPRIS P1 BASIC1.92□□□□□ -2.1
ATG4DQ86TL0 AL596028.1-201ENST00000326971 197 ntBASIC1.91□□□□□ -2.1
ATG4DQ86TL0 TRAJ53-201ENST00000390485 66 ntAPPRIS P1 BASIC1.91□□□□□ -2.1
ATG4DQ86TL0 RNA5SP95-201ENST00000410319 137 ntBASIC1.91□□□□□ -2.1
ATG4DQ86TL0 RNU6-1194P-201ENST00000516208 104 ntBASIC1.91□□□□□ -2.1
ATG4DQ86TL0 RNU6-947P-201ENST00000516264 106 ntBASIC1.91□□□□□ -2.1
ATG4DQ86TL0 MIR514B-201ENST00000516774 80 ntBASIC1.91□□□□□ -2.1
ATG4DQ86TL0 RNU7-156P-201ENST00000517214 74 ntBASIC1.91□□□□□ -2.1
ATG4DQ86TL0 VPS35-212ENST00000640313 141 ntTSL 5 BASIC1.91□□□□□ -2.1
ATG4DQ86TL0 SIRT1-203ENST00000406900 3295 ntTSL 2 BASIC1.91□□□□□ -2.1
ATG4DQ86TL0 FAR1-204ENST00000532502 5820 ntTSL 2 BASIC1.9□□□□□ -2.1
ATG4DQ86TL0 RNU4-58P-201ENST00000363192 141 ntBASIC1.9□□□□□ -2.11
ATG4DQ86TL0 Y_RNA.207-201ENST00000364142 106 ntBASIC1.9□□□□□ -2.11
ATG4DQ86TL0 RNA5SP37-201ENST00000365420 130 ntBASIC1.9□□□□□ -2.11
ATG4DQ86TL0 RNU6-1051P-201ENST00000365471 102 ntBASIC1.9□□□□□ -2.11
ATG4DQ86TL0 RNU6-154P-201ENST00000384306 106 ntBASIC1.9□□□□□ -2.11
ATG4DQ86TL0 Y_RNA.588-201ENST00000391254 102 ntBASIC1.9□□□□□ -2.11
ATG4DQ86TL0 SNORD93-201ENST00000408813 74 ntBASIC1.9□□□□□ -2.11
ATG4DQ86TL0 TRAJ51-201ENST00000504127 63 ntBASIC1.9□□□□□ -2.11
ATG4DQ86TL0 MIR6516-201ENST00000630554 81 ntBASIC1.9□□□□□ -2.11
ATG4DQ86TL0 KIF20B-202ENST00000371728 6419 ntAPPRIS ALT2 TSL 1 (best) BASIC1.89□□□□□ -2.11
ATG4DQ86TL0 Y_RNA.36-201ENST00000362602 112 ntBASIC1.89□□□□□ -2.11
ATG4DQ86TL0 RNU6-403P-201ENST00000363163 104 ntBASIC1.89□□□□□ -2.11
ATG4DQ86TL0 RNU6-53P-201ENST00000365367 106 ntBASIC1.89□□□□□ -2.11
ATG4DQ86TL0 RNU6-439P-201ENST00000384188 106 ntBASIC1.89□□□□□ -2.11
ATG4DQ86TL0 MT-TF-201ENST00000387314 71 ntBASIC1.89□□□□□ -2.11
ATG4DQ86TL0 SNORD100-201ENST00000408573 76 ntBASIC1.89□□□□□ -2.11
ATG4DQ86TL0 AL161935.2-201ENST00000414627 60 ntBASIC1.89□□□□□ -2.11
ATG4DQ86TL0 HMGN2P38-201ENST00000423806 265 ntBASIC1.89□□□□□ -2.11
ATG4DQ86TL0 AC025033.1-201ENST00000463883 194 ntBASIC1.89□□□□□ -2.11
ATG4DQ86TL0 MIR3140-201ENST00000583685 90 ntBASIC1.89□□□□□ -2.11
ATG4DQ86TL0 USP53-202ENST00000450251 6072 ntAPPRIS P1 TSL 5 BASIC1.88□□□□□ -2.11
ATG4DQ86TL0 ZDBF2-202ENST00000611847 9890 ntTSL 5 BASIC1.88□□□□□ -2.11
ATG4DQ86TL0 AC131280.1-202ENST00000624067 4211 ntBASIC1.88□□□□□ -2.11
ATG4DQ86TL0 MIR337-201ENST00000362281 93 ntBASIC1.88□□□□□ -2.11
ATG4DQ86TL0 SNORA3A-201ENST00000364113 130 ntBASIC1.88□□□□□ -2.11
ATG4DQ86TL0 RNU6-654P-201ENST00000364373 107 ntBASIC1.88□□□□□ -2.11
ATG4DQ86TL0 RNU6-291P-201ENST00000384720 107 ntBASIC1.88□□□□□ -2.11
ATG4DQ86TL0 MIR764-201ENST00000390811 85 ntBASIC1.88□□□□□ -2.11
ATG4DQ86TL0 RPL30P7-201ENST00000479312 323 ntBASIC1.88□□□□□ -2.11
ATG4DQ86TL0 RN7SL274P-201ENST00000492268 272 ntBASIC1.88□□□□□ -2.11
ATG4DQ86TL0 MIR2115-201ENST00000516657 100 ntBASIC1.88□□□□□ -2.11
ATG4DQ86TL0 RNU11-2P-201ENST00000516898 142 ntBASIC1.88□□□□□ -2.11
ATG4DQ86TL0 AC013244.2-201ENST00000603396 103 ntBASIC1.88□□□□□ -2.11
ATG4DQ86TL0 TRDV1-202ENST00000621643 102 ntBASIC1.88□□□□□ -2.11
ATG4DQ86TL0 MIR7843-201ENST00000622274 79 ntBASIC1.88□□□□□ -2.11
ATG4DQ86TL0 Y_RNA.42-201ENST00000362660 108 ntBASIC1.87□□□□□ -2.11
ATG4DQ86TL0 RNU6-340P-201ENST00000364005 107 ntBASIC1.87□□□□□ -2.11
ATG4DQ86TL0 RNA5SP160-201ENST00000364866 120 ntBASIC1.87□□□□□ -2.11
ATG4DQ86TL0 RNU1-36P-201ENST00000365130 165 ntBASIC1.87□□□□□ -2.11
ATG4DQ86TL0 Y_RNA.536-201ENST00000384621 113 ntBASIC1.87□□□□□ -2.11
ATG4DQ86TL0 MIR9-2-201ENST00000384838 87 ntBASIC1.87□□□□□ -2.11
Retrieved 100 of 98,524 protein–RNA pairs in 124.1 ms