Protein–RNA interactions for Protein: Q7Z4I7

LIMS2, LIM and senescent cell antigen-like-containing domain protein 2, humanhuman

Predictions only

Length 341 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2Q7Z4I7 AL353997.5-201ENST00000618886 171 ntBASIC1.75□□□□□ -2.13
LIMS2Q7Z4I7 SENP7-201ENST00000314261 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC1.75□□□□□ -2.13
LIMS2Q7Z4I7 LINC01790-201ENST00000447194 2852 ntTSL 2 BASIC1.75□□□□□ -2.13
LIMS2Q7Z4I7 BRDT-206ENST00000402388 3125 ntAPPRIS P3 TSL 1 (best) BASIC1.75□□□□□ -2.13
LIMS2Q7Z4I7 KIAA1107-201ENST00000370378 4622 ntTSL 5 BASIC1.75□□□□□ -2.13
LIMS2Q7Z4I7 SNORA67.5-201ENST00000391036 107 ntBASIC1.74□□□□□ -2.13
LIMS2Q7Z4I7 RNA5SP237-201ENST00000410414 113 ntBASIC1.74□□□□□ -2.13
LIMS2Q7Z4I7 JTBP1-201ENST00000441314 247 ntBASIC1.74□□□□□ -2.13
LIMS2Q7Z4I7 AC138749.4-201ENST00000563970 127 ntBASIC1.74□□□□□ -2.13
LIMS2Q7Z4I7 BRCA1-202ENST00000354071 4497 ntTSL 1 (best) BASIC1.74□□□□□ -2.13
LIMS2Q7Z4I7 TRAJ1-201ENST00000390536 62 ntAPPRIS P1 BASIC1.73□□□□□ -2.13
LIMS2Q7Z4I7 RNU6ATAC42P-201ENST00000408637 95 ntBASIC1.73□□□□□ -2.13
LIMS2Q7Z4I7 RNU4-83P-201ENST00000410863 133 ntBASIC1.73□□□□□ -2.13
LIMS2Q7Z4I7 SNORD4B-201ENST00000459083 72 ntBASIC1.73□□□□□ -2.13
LIMS2Q7Z4I7 AL096861.1-201ENST00000610899 123 ntBASIC1.73□□□□□ -2.13
LIMS2Q7Z4I7 ST7-AS2_1.1-201ENST00000622900 72 ntBASIC1.73□□□□□ -2.13
LIMS2Q7Z4I7 AC008163.1-202ENST00000636004 2889 ntBASIC1.73□□□□□ -2.13
LIMS2Q7Z4I7 SENP7-207ENST00000394095 4945 ntAPPRIS P3 TSL 1 (best) BASIC1.73□□□□□ -2.13
LIMS2Q7Z4I7 AP000648.3-201ENST00000623539 4507 ntBASIC1.72□□□□□ -2.13
LIMS2Q7Z4I7 MIR30D-201ENST00000362283 70 ntBASIC1.72□□□□□ -2.13
LIMS2Q7Z4I7 Y_RNA.168-201ENST00000363740 102 ntBASIC1.72□□□□□ -2.13
LIMS2Q7Z4I7 MIR588-201ENST00000384900 83 ntBASIC1.72□□□□□ -2.13
LIMS2Q7Z4I7 MIR513A1-201ENST00000385138 129 ntBASIC1.72□□□□□ -2.13
LIMS2Q7Z4I7 snoU13.25-201ENST00000458945 104 ntBASIC1.72□□□□□ -2.13
LIMS2Q7Z4I7 SNORD111.1-201ENST00000516421 86 ntBASIC1.72□□□□□ -2.13
LIMS2Q7Z4I7 AP003716.2-201ENST00000528260 108 ntBASIC1.72□□□□□ -2.13
LIMS2Q7Z4I7 MIR4299-201ENST00000577899 72 ntBASIC1.72□□□□□ -2.13
LIMS2Q7Z4I7 SNORA77B-201ENST00000578179 125 ntBASIC1.72□□□□□ -2.13
LIMS2Q7Z4I7 AC090897.1-201ENST00000580909 226 ntBASIC1.72□□□□□ -2.13
LIMS2Q7Z4I7 AP000753.3-201ENST00000604083 169 ntBASIC1.72□□□□□ -2.13
LIMS2Q7Z4I7 MIR8066-201ENST00000617280 78 ntBASIC1.72□□□□□ -2.13
LIMS2Q7Z4I7 RNA5SP212-201ENST00000391223 107 ntBASIC1.71□□□□□ -2.14
LIMS2Q7Z4I7 RNU6-519P-201ENST00000410590 108 ntBASIC1.71□□□□□ -2.14
LIMS2Q7Z4I7 ATP6V0E1P3-201ENST00000420036 246 ntBASIC1.71□□□□□ -2.14
LIMS2Q7Z4I7 AL603825.1-201ENST00000438481 80 ntBASIC1.71□□□□□ -2.14
LIMS2Q7Z4I7 AC027119.1-201ENST00000440877 241 ntBASIC1.71□□□□□ -2.14
LIMS2Q7Z4I7 RNU7-153P-201ENST00000516455 62 ntBASIC1.71□□□□□ -2.14
LIMS2Q7Z4I7 AC015688.6-201ENST00000577737 104 ntBASIC1.71□□□□□ -2.14
LIMS2Q7Z4I7 MIR6740-201ENST00000618268 113 ntBASIC1.71□□□□□ -2.14
LIMS2Q7Z4I7 UHRF1BP1L-203ENST00000545232 4088 ntTSL 1 (best) BASIC1.71□□□□□ -2.14
LIMS2Q7Z4I7 RNU6-624P-201ENST00000363411 107 ntBASIC1.7□□□□□ -2.14
LIMS2Q7Z4I7 RNA5SP259-201ENST00000365541 109 ntBASIC1.7□□□□□ -2.14
LIMS2Q7Z4I7 RNU6-571P-201ENST00000384128 107 ntBASIC1.7□□□□□ -2.14
LIMS2Q7Z4I7 MIR1236-201ENST00000408340 102 ntBASIC1.7□□□□□ -2.14
LIMS2Q7Z4I7 RNU7-85P-201ENST00000458851 63 ntBASIC1.7□□□□□ -2.14
LIMS2Q7Z4I7 AC139453.2-201ENST00000487255 133 ntBASIC1.7□□□□□ -2.14
LIMS2Q7Z4I7 RNU6-850P-201ENST00000516934 103 ntBASIC1.7□□□□□ -2.14
LIMS2Q7Z4I7 AL512598.1-201ENST00000610158 273 ntBASIC1.7□□□□□ -2.14
LIMS2Q7Z4I7 TEX15-203ENST00000638951 11341 ntAPPRIS P1 TSL 5 BASIC1.69□□□□□ -2.14
LIMS2Q7Z4I7 RNA5SP276-201ENST00000362580 94 ntBASIC1.69□□□□□ -2.14
LIMS2Q7Z4I7 RNU6-315P-201ENST00000362666 107 ntBASIC1.69□□□□□ -2.14
LIMS2Q7Z4I7 RNU6-1229P-201ENST00000364295 107 ntBASIC1.69□□□□□ -2.14
LIMS2Q7Z4I7 RNU6-396P-201ENST00000365369 105 ntBASIC1.69□□□□□ -2.14
LIMS2Q7Z4I7 MT-TN-201ENST00000387400 73 ntBASIC1.69□□□□□ -2.14
LIMS2Q7Z4I7 AC073261.1-201ENST00000429409 121 ntBASIC1.69□□□□□ -2.14
LIMS2Q7Z4I7 SNORA25.13-201ENST00000516395 103 ntBASIC1.69□□□□□ -2.14
LIMS2Q7Z4I7 RNU6-922P-201ENST00000516753 99 ntBASIC1.69□□□□□ -2.14
LIMS2Q7Z4I7 MIR4303-201ENST00000581299 66 ntBASIC1.69□□□□□ -2.14
LIMS2Q7Z4I7 AC022596.1-201ENST00000582895 302 ntTSL 5 BASIC1.69□□□□□ -2.14
LIMS2Q7Z4I7 MIR4264-201ENST00000583520 66 ntBASIC1.69□□□□□ -2.14
LIMS2Q7Z4I7 SNORA4-201ENST00000584302 138 ntBASIC1.69□□□□□ -2.14
LIMS2Q7Z4I7 AL357312.1-201ENST00000603879 298 ntBASIC1.69□□□□□ -2.14
LIMS2Q7Z4I7 Y_RNA.57-201ENST00000362806 113 ntBASIC1.68□□□□□ -2.14
LIMS2Q7Z4I7 SNORD115-37-201ENST00000363768 82 ntBASIC1.68□□□□□ -2.14
LIMS2Q7Z4I7 RNU6-439P-201ENST00000384188 106 ntBASIC1.68□□□□□ -2.14
LIMS2Q7Z4I7 Y_RNA.648-201ENST00000459455 110 ntBASIC1.68□□□□□ -2.14
LIMS2Q7Z4I7 MIR4500-201ENST00000579472 76 ntBASIC1.68□□□□□ -2.14
LIMS2Q7Z4I7 Y_RNA.119-201ENST00000363301 96 ntBASIC1.67□□□□□ -2.14
LIMS2Q7Z4I7 RNU6-478P-201ENST00000363904 110 ntBASIC1.67□□□□□ -2.14
LIMS2Q7Z4I7 RNU6-1165P-201ENST00000410119 107 ntBASIC1.67□□□□□ -2.14
LIMS2Q7Z4I7 AC108667.1-201ENST00000428618 249 ntBASIC1.67□□□□□ -2.14
LIMS2Q7Z4I7 HSPE1P24-201ENST00000450782 238 ntBASIC1.67□□□□□ -2.14
LIMS2Q7Z4I7 AC005908.1-201ENST00000468701 347 ntBASIC1.67□□□□□ -2.14
LIMS2Q7Z4I7 GHRLOS.1-201ENST00000610995 70 ntBASIC1.67□□□□□ -2.14
LIMS2Q7Z4I7 TRAJ23-201ENST00000390514 63 ntAPPRIS P1 BASIC1.66□□□□□ -2.14
LIMS2Q7Z4I7 RNU6-129P-201ENST00000391022 107 ntBASIC1.66□□□□□ -2.14
LIMS2Q7Z4I7 AC145423.2-201ENST00000610631 239 ntBASIC1.66□□□□□ -2.14
LIMS2Q7Z4I7 U6.109-201ENST00000636749 87 ntBASIC1.66□□□□□ -2.14
LIMS2Q7Z4I7 SNORD36A-201ENST00000362874 73 ntBASIC1.65□□□□□ -2.15
LIMS2Q7Z4I7 SNORA25.3-201ENST00000363205 127 ntBASIC1.65□□□□□ -2.15
LIMS2Q7Z4I7 RNU6-580P-201ENST00000365159 107 ntBASIC1.65□□□□□ -2.15
LIMS2Q7Z4I7 RPL30P7-201ENST00000479312 323 ntBASIC1.65□□□□□ -2.15
LIMS2Q7Z4I7 AL133373.1-201ENST00000497098 94 ntBASIC1.65□□□□□ -2.15
LIMS2Q7Z4I7 MIR2115-201ENST00000516657 100 ntBASIC1.65□□□□□ -2.15
LIMS2Q7Z4I7 RNU6-557P-201ENST00000516842 110 ntBASIC1.65□□□□□ -2.15
LIMS2Q7Z4I7 RNU11-2P-201ENST00000516898 142 ntBASIC1.65□□□□□ -2.15
LIMS2Q7Z4I7 AL645939.4-201ENST00000604495 135 ntBASIC1.65□□□□□ -2.15
LIMS2Q7Z4I7 uc_338.6-201ENST00000613544 171 ntBASIC1.65□□□□□ -2.15
LIMS2Q7Z4I7 AL773524.1-201ENST00000614065 229 ntBASIC1.65□□□□□ -2.15
LIMS2Q7Z4I7 MIR377-201ENST00000362145 69 ntBASIC1.64□□□□□ -2.15
LIMS2Q7Z4I7 MT-TF-201ENST00000387314 71 ntBASIC1.64□□□□□ -2.15
LIMS2Q7Z4I7 MIR889-201ENST00000401280 79 ntBASIC1.64□□□□□ -2.15
LIMS2Q7Z4I7 MIR1185-1-201ENST00000408598 86 ntBASIC1.64□□□□□ -2.15
LIMS2Q7Z4I7 BX276092.1-201ENST00000427368 251 ntBASIC1.64□□□□□ -2.15
LIMS2Q7Z4I7 AP001109.1-201ENST00000587114 279 ntTSL 3 BASIC1.64□□□□□ -2.15
LIMS2Q7Z4I7 MIR6516-201ENST00000630554 81 ntBASIC1.64□□□□□ -2.15
LIMS2Q7Z4I7 NPAT-201ENST00000278612 6117 ntAPPRIS P2 TSL 1 (best) BASIC1.63□□□□□ -2.15
LIMS2Q7Z4I7 RNU4-32P-201ENST00000363404 141 ntBASIC1.63□□□□□ -2.15
LIMS2Q7Z4I7 RNU6-997P-201ENST00000384725 107 ntBASIC1.63□□□□□ -2.15
LIMS2Q7Z4I7 MIR517C-201ENST00000385103 95 ntBASIC1.63□□□□□ -2.15
Retrieved 100 of 98,524 protein–RNA pairs in 166.2 ms