Protein–RNA interactions for Protein: Q6NUP7

PPP4R4, Serine/threonine-protein phosphatase 4 regulatory subunit 4, humanhuman

Predictions only

Length 873 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R4Q6NUP7 MIR532-201ENST00000385025 91 ntBASIC0.8□□□□□ -2.28
PPP4R4Q6NUP7 RNU6-1321P-201ENST00000390905 107 ntBASIC0.8□□□□□ -2.28
PPP4R4Q6NUP7 MIR1263-201ENST00000408324 86 ntBASIC0.8□□□□□ -2.28
PPP4R4Q6NUP7 RNA5SP136-201ENST00000410906 107 ntBASIC0.8□□□□□ -2.28
PPP4R4Q6NUP7 AL138808.1-201ENST00000441428 371 ntTSL 2 BASIC0.8□□□□□ -2.28
PPP4R4Q6NUP7 RNU6-351P-201ENST00000516097 100 ntBASIC0.8□□□□□ -2.28
PPP4R4Q6NUP7 RNU6-971P-201ENST00000516920 106 ntBASIC0.8□□□□□ -2.28
PPP4R4Q6NUP7 MTND5P34-201ENST00000568888 325 ntBASIC0.8□□□□□ -2.28
PPP4R4Q6NUP7 ZBTB41-201ENST00000367405 8478 ntAPPRIS P1 TSL 1 (best) BASIC0.79□□□□□ -2.28
PPP4R4Q6NUP7 RNU4-45P-201ENST00000365469 141 ntBASIC0.79□□□□□ -2.28
PPP4R4Q6NUP7 RNU6-531P-201ENST00000516694 104 ntBASIC0.79□□□□□ -2.28
PPP4R4Q6NUP7 RNU6-1234P-201ENST00000516877 103 ntBASIC0.79□□□□□ -2.28
PPP4R4Q6NUP7 FAM71BP1-201ENST00000604431 523 ntBASIC0.79□□□□□ -2.28
PPP4R4Q6NUP7 Y_RNA.773-201ENST00000607168 90 ntBASIC0.79□□□□□ -2.28
PPP4R4Q6NUP7 uc_338.16-201ENST00000621804 95 ntBASIC0.79□□□□□ -2.28
PPP4R4Q6NUP7 LEKR1-212ENST00000640869 237 ntTSL 5 BASIC0.79□□□□□ -2.28
PPP4R4Q6NUP7 Y_RNA.32-201ENST00000362589 110 ntBASIC0.78□□□□□ -2.28
PPP4R4Q6NUP7 SNORD115-19-201ENST00000363098 82 ntBASIC0.78□□□□□ -2.28
PPP4R4Q6NUP7 SNORD115-18-201ENST00000363293 82 ntBASIC0.78□□□□□ -2.28
PPP4R4Q6NUP7 SNORD115-17-201ENST00000364612 82 ntBASIC0.78□□□□□ -2.28
PPP4R4Q6NUP7 SNORD50.2-201ENST00000365465 70 ntBASIC0.78□□□□□ -2.28
PPP4R4Q6NUP7 RNU6-291P-201ENST00000384720 107 ntBASIC0.78□□□□□ -2.28
PPP4R4Q6NUP7 MIR3973-201ENST00000579824 107 ntBASIC0.78□□□□□ -2.28
PPP4R4Q6NUP7 CCDC73-201ENST00000335185 3849 ntAPPRIS P2 TSL 2 BASIC0.77□□□□□ -2.29
PPP4R4Q6NUP7 MIR373-201ENST00000362273 69 ntBASIC0.77□□□□□ -2.29
PPP4R4Q6NUP7 SNORA36.2-201ENST00000384004 127 ntBASIC0.77□□□□□ -2.29
PPP4R4Q6NUP7 Y_RNA.528-201ENST00000384575 108 ntBASIC0.77□□□□□ -2.29
PPP4R4Q6NUP7 MIR598-201ENST00000384868 97 ntBASIC0.77□□□□□ -2.29
PPP4R4Q6NUP7 MIR140-201ENST00000385282 100 ntBASIC0.77□□□□□ -2.29
PPP4R4Q6NUP7 SNORD77B-201ENST00000391112 67 ntBASIC0.77□□□□□ -2.29
PPP4R4Q6NUP7 RNU7-6P-201ENST00000516845 62 ntBASIC0.77□□□□□ -2.29
PPP4R4Q6NUP7 RNY1P2-201ENST00000364820 117 ntBASIC0.76□□□□□ -2.29
PPP4R4Q6NUP7 Y_RNA.448-201ENST00000384185 108 ntBASIC0.76□□□□□ -2.29
PPP4R4Q6NUP7 Y_RNA.525-201ENST00000384570 113 ntBASIC0.76□□□□□ -2.29
PPP4R4Q6NUP7 Y_RNA.630-201ENST00000411370 108 ntBASIC0.76□□□□□ -2.29
PPP4R4Q6NUP7 RNU6-772P-201ENST00000516042 105 ntBASIC0.76□□□□□ -2.29
PPP4R4Q6NUP7 RNU6-1194P-201ENST00000516208 104 ntBASIC0.76□□□□□ -2.29
PPP4R4Q6NUP7 AC018659.1-201ENST00000551083 169 ntBASIC0.76□□□□□ -2.29
PPP4R4Q6NUP7 AC133485.1-201ENST00000567176 124 ntBASIC0.76□□□□□ -2.29
PPP4R4Q6NUP7 MIR3163-201ENST00000581592 73 ntBASIC0.76□□□□□ -2.29
PPP4R4Q6NUP7 AL590095.2-201ENST00000604136 117 ntBASIC0.76□□□□□ -2.29
PPP4R4Q6NUP7 C9orf84-203ENST00000374287 4721 ntAPPRIS P3 TSL 5 BASIC0.75□□□□□ -2.29
PPP4R4Q6NUP7 Y_RNA.119-201ENST00000363301 96 ntBASIC0.75□□□□□ -2.29
PPP4R4Q6NUP7 Y_RNA.218-201ENST00000364218 104 ntBASIC0.75□□□□□ -2.29
PPP4R4Q6NUP7 Y_RNA.536-201ENST00000384621 113 ntBASIC0.75□□□□□ -2.29
PPP4R4Q6NUP7 RNU7-107P-201ENST00000459121 61 ntBASIC0.75□□□□□ -2.29
PPP4R4Q6NUP7 RNU6-1211P-201ENST00000459179 105 ntBASIC0.75□□□□□ -2.29
PPP4R4Q6NUP7 RNU7-2P-201ENST00000516096 62 ntBASIC0.75□□□□□ -2.29
PPP4R4Q6NUP7 SNORA31.14-201ENST00000516728 116 ntBASIC0.75□□□□□ -2.29
PPP4R4Q6NUP7 MIR5000-201ENST00000577717 103 ntBASIC0.75□□□□□ -2.29
PPP4R4Q6NUP7 MIR6866-201ENST00000638146 69 ntBASIC0.75□□□□□ -2.29
PPP4R4Q6NUP7 RNU6-704P-201ENST00000364162 103 ntBASIC0.74□□□□□ -2.29
PPP4R4Q6NUP7 Y_RNA.213-201ENST00000364178 111 ntBASIC0.74□□□□□ -2.29
PPP4R4Q6NUP7 CPEB3_ribozyme.1-201ENST00000408115 78 ntBASIC0.74□□□□□ -2.29
PPP4R4Q6NUP7 RNA5SP480-201ENST00000516840 109 ntBASIC0.74□□□□□ -2.29
PPP4R4Q6NUP7 MIR3678-201ENST00000578455 94 ntBASIC0.74□□□□□ -2.29
PPP4R4Q6NUP7 AC025166.1-201ENST00000612411 163 ntBASIC0.74□□□□□ -2.29
PPP4R4Q6NUP7 IST1-227ENST00000626438 126 ntTSL 5 BASIC0.74□□□□□ -2.29
PPP4R4Q6NUP7 SENP7-207ENST00000394095 4945 ntAPPRIS P3 TSL 1 (best) BASIC0.74□□□□□ -2.29
PPP4R4Q6NUP7 RNU4-58P-201ENST00000363192 141 ntBASIC0.73□□□□□ -2.29
PPP4R4Q6NUP7 SNORD115-35-201ENST00000365122 82 ntBASIC0.73□□□□□ -2.29
PPP4R4Q6NUP7 MIR644A-201ENST00000385262 94 ntBASIC0.73□□□□□ -2.29
PPP4R4Q6NUP7 RNU7-48P-201ENST00000458875 63 ntBASIC0.73□□□□□ -2.29
PPP4R4Q6NUP7 RNU4-54P-201ENST00000516428 129 ntBASIC0.73□□□□□ -2.29
PPP4R4Q6NUP7 RNU6-1061P-201ENST00000516530 99 ntBASIC0.73□□□□□ -2.29
PPP4R4Q6NUP7 Y_RNA.697-201ENST00000516776 113 ntBASIC0.73□□□□□ -2.29
PPP4R4Q6NUP7 MIR1255B1-201ENST00000636325 63 ntBASIC0.73□□□□□ -2.29
PPP4R4Q6NUP7 RNA5SP117-201ENST00000365294 118 ntBASIC0.72□□□□□ -2.29
PPP4R4Q6NUP7 MIR539-201ENST00000365690 78 ntBASIC0.72□□□□□ -2.29
PPP4R4Q6NUP7 RNU6-945P-201ENST00000383947 107 ntBASIC0.72□□□□□ -2.29
PPP4R4Q6NUP7 RNU6ATAC27P-201ENST00000408289 119 ntBASIC0.72□□□□□ -2.29
PPP4R4Q6NUP7 RNA5SP121-201ENST00000516537 101 ntBASIC0.72□□□□□ -2.29
PPP4R4Q6NUP7 DEFB131E-201ENST00000532329 154 ntBASIC0.72□□□□□ -2.29
PPP4R4Q6NUP7 CYP3A137P-201ENST00000562436 69 ntBASIC0.72□□□□□ -2.29
PPP4R4Q6NUP7 MTND5P18-201ENST00000445624 1801 ntBASIC0.72□□□□□ -2.29
PPP4R4Q6NUP7 Y_RNA.36-201ENST00000362602 112 ntBASIC0.71□□□□□ -2.3
PPP4R4Q6NUP7 RNA5SP245-201ENST00000364239 121 ntBASIC0.71□□□□□ -2.3
PPP4R4Q6NUP7 RNU6-535P-201ENST00000384722 107 ntBASIC0.71□□□□□ -2.3
PPP4R4Q6NUP7 MIR548D2-201ENST00000384955 97 ntBASIC0.71□□□□□ -2.3
PPP4R4Q6NUP7 MIR7-2-201ENST00000384970 110 ntBASIC0.71□□□□□ -2.3
PPP4R4Q6NUP7 RNU6ATAC31P-201ENST00000408513 126 ntBASIC0.71□□□□□ -2.3
PPP4R4Q6NUP7 RNA5SP94-201ENST00000516917 108 ntBASIC0.71□□□□□ -2.3
PPP4R4Q6NUP7 MIR376B-201ENST00000614515 100 ntBASIC0.71□□□□□ -2.3
PPP4R4Q6NUP7 Y_RNA.127-201ENST00000363386 109 ntBASIC0.7□□□□□ -2.3
PPP4R4Q6NUP7 SNORD114-26-201ENST00000363543 72 ntBASIC0.7□□□□□ -2.3
PPP4R4Q6NUP7 TRAJ22-201ENST00000390515 63 ntAPPRIS P1 BASIC0.7□□□□□ -2.3
PPP4R4Q6NUP7 MIR6835-201ENST00000621552 64 ntBASIC0.7□□□□□ -2.3
PPP4R4Q6NUP7 SNORA63.5-201ENST00000363548 123 ntBASIC0.69□□□□□ -2.3
PPP4R4Q6NUP7 SNORD18A-201ENST00000363753 72 ntBASIC0.69□□□□□ -2.3
PPP4R4Q6NUP7 Y_RNA.328-201ENST00000365208 113 ntBASIC0.69□□□□□ -2.3
PPP4R4Q6NUP7 Y_RNA.344-201ENST00000365381 112 ntBASIC0.69□□□□□ -2.3
PPP4R4Q6NUP7 RNU6-429P-201ENST00000384582 108 ntBASIC0.69□□□□□ -2.3
PPP4R4Q6NUP7 AC004941.2-201ENST00000427009 228 ntBASIC0.69□□□□□ -2.3
PPP4R4Q6NUP7 RN7SKP12-201ENST00000516275 143 ntBASIC0.69□□□□□ -2.3
PPP4R4Q6NUP7 AC138907.6-201ENST00000568401 126 ntBASIC0.69□□□□□ -2.3
PPP4R4Q6NUP7 Y_RNA.98-201ENST00000363109 102 ntBASIC0.68□□□□□ -2.3
PPP4R4Q6NUP7 SNORA36.1-201ENST00000363424 132 ntBASIC0.68□□□□□ -2.3
PPP4R4Q6NUP7 Y_RNA.174-201ENST00000363781 105 ntBASIC0.68□□□□□ -2.3
PPP4R4Q6NUP7 RNA5SP517-201ENST00000364724 117 ntBASIC0.68□□□□□ -2.3
PPP4R4Q6NUP7 RNU6-80P-201ENST00000384195 107 ntBASIC0.68□□□□□ -2.3
Retrieved 100 of 98,524 protein–RNA pairs in 209.8 ms