Protein–RNA interactions for Protein: Q68DV7

RNF43, E3 ubiquitin-protein ligase RNF43, humanhuman

Predictions only

Length 783 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF43Q68DV7 SNORA25.9-201ENST00000365087 128 ntBASIC2.17□□□□□ -2.06
RNF43Q68DV7 MIR635-201ENST00000384830 98 ntBASIC2.17□□□□□ -2.06
RNF43Q68DV7 MIR516A2-201ENST00000384888 90 ntBASIC2.17□□□□□ -2.06
RNF43Q68DV7 MIR516A1-201ENST00000385033 90 ntBASIC2.17□□□□□ -2.06
RNF43Q68DV7 TRAJ49-201ENST00000390488 56 ntAPPRIS P1 BASIC2.17□□□□□ -2.06
RNF43Q68DV7 RNU6-322P-201ENST00000516010 103 ntBASIC2.17□□□□□ -2.06
RNF43Q68DV7 RNU6-448P-201ENST00000517052 107 ntBASIC2.17□□□□□ -2.06
RNF43Q68DV7 U1.36-201ENST00000620684 176 ntBASIC2.17□□□□□ -2.06
RNF43Q68DV7 AC131280.1-202ENST00000624067 4211 ntBASIC2.17□□□□□ -2.06
RNF43Q68DV7 SCN7A-206ENST00000619410 7186 ntAPPRIS P1 TSL 5 BASIC2.17□□□□□ -2.06
RNF43Q68DV7 SCN7A-207ENST00000621965 7186 ntAPPRIS P1 TSL 5 BASIC2.17□□□□□ -2.06
RNF43Q68DV7 AC008163.1-205ENST00000413944 4649 ntTSL 1 (best) BASIC2.16□□□□□ -2.06
RNF43Q68DV7 ZNF654-201ENST00000309495 4957 ntAPPRIS P2 TSL 1 (best) BASIC2.16□□□□□ -2.06
RNF43Q68DV7 SNORD36A-201ENST00000362874 73 ntBASIC2.16□□□□□ -2.06
RNF43Q68DV7 RNA5SP160-201ENST00000364866 120 ntBASIC2.16□□□□□ -2.06
RNF43Q68DV7 RNU6-132P-201ENST00000383863 107 ntBASIC2.16□□□□□ -2.06
RNF43Q68DV7 MIR583-201ENST00000384846 75 ntBASIC2.16□□□□□ -2.06
RNF43Q68DV7 RNU6-360P-201ENST00000390944 104 ntBASIC2.16□□□□□ -2.06
RNF43Q68DV7 RNA5SP270-201ENST00000411361 118 ntBASIC2.16□□□□□ -2.06
RNF43Q68DV7 RNU6-871P-201ENST00000516122 100 ntBASIC2.16□□□□□ -2.06
RNF43Q68DV7 MIR6845-201ENST00000613182 61 ntBASIC2.16□□□□□ -2.06
RNF43Q68DV7 AC245884.12-201ENST00000615364 59 ntBASIC2.16□□□□□ -2.06
RNF43Q68DV7 MIR6740-201ENST00000618268 113 ntBASIC2.16□□□□□ -2.06
RNF43Q68DV7 SI-201ENST00000264382 6011 ntAPPRIS P1 TSL 1 (best) BASIC2.16□□□□□ -2.06
RNF43Q68DV7 ZBBX-205ENST00000455345 3185 ntAPPRIS ALT2 TSL 1 (best) BASIC2.16□□□□□ -2.06
RNF43Q68DV7 MIR563-201ENST00000385080 79 ntBASIC2.15□□□□□ -2.07
RNF43Q68DV7 AC004965.1-201ENST00000413033 213 ntBASIC2.15□□□□□ -2.07
RNF43Q68DV7 AC125388.1-201ENST00000459631 156 ntBASIC2.15□□□□□ -2.07
RNF43Q68DV7 RNU6-70P-201ENST00000516438 60 ntBASIC2.15□□□□□ -2.07
RNF43Q68DV7 MIR3064-201ENST00000581130 66 ntBASIC2.15□□□□□ -2.07
RNF43Q68DV7 SNORA4-201ENST00000584302 138 ntBASIC2.15□□□□□ -2.07
RNF43Q68DV7 AP001109.1-201ENST00000587114 279 ntTSL 3 BASIC2.15□□□□□ -2.07
RNF43Q68DV7 CERS6-AS1-202ENST00000594898 499 ntTSL 5 BASIC2.15□□□□□ -2.07
RNF43Q68DV7 OR5M1-202ENST00000641076 4302 ntAPPRIS P1 BASIC2.15□□□□□ -2.07
RNF43Q68DV7 MIR337-201ENST00000362281 93 ntBASIC2.14□□□□□ -2.07
RNF43Q68DV7 Y_RNA.340-201ENST00000365330 92 ntBASIC2.14□□□□□ -2.07
RNF43Q68DV7 MIR194-1-201ENST00000384892 85 ntBASIC2.14□□□□□ -2.07
RNF43Q68DV7 RNU6-243P-201ENST00000391140 107 ntBASIC2.14□□□□□ -2.07
RNF43Q68DV7 RNU6-1254P-201ENST00000391266 104 ntBASIC2.14□□□□□ -2.07
RNF43Q68DV7 RNU6-75P-201ENST00000515944 104 ntBASIC2.14□□□□□ -2.07
RNF43Q68DV7 SNORD111.1-201ENST00000516421 86 ntBASIC2.14□□□□□ -2.07
RNF43Q68DV7 AC104996.3-201ENST00000590718 94 ntBASIC2.14□□□□□ -2.07
RNF43Q68DV7 AL096861.1-201ENST00000610899 123 ntBASIC2.14□□□□□ -2.07
RNF43Q68DV7 MIR6840-201ENST00000611937 71 ntBASIC2.14□□□□□ -2.07
RNF43Q68DV7 PTPRQ-209ENST00000616559 8165 ntTSL 5 BASIC2.14□□□□□ -2.07
RNF43Q68DV7 ATP13A3-201ENST00000256031 7322 ntAPPRIS P1 TSL 5 BASIC2.13□□□□□ -2.07
RNF43Q68DV7 AL596028.1-201ENST00000326971 197 ntBASIC2.13□□□□□ -2.07
RNF43Q68DV7 MIR30D-201ENST00000362283 70 ntBASIC2.13□□□□□ -2.07
RNF43Q68DV7 RNA5SP48-201ENST00000363969 126 ntBASIC2.13□□□□□ -2.07
RNF43Q68DV7 Y_RNA.283-201ENST00000364798 112 ntBASIC2.13□□□□□ -2.07
RNF43Q68DV7 SNORD77.2-201ENST00000391045 68 ntBASIC2.13□□□□□ -2.07
RNF43Q68DV7 MIR1302-7-201ENST00000408841 72 ntBASIC2.13□□□□□ -2.07
RNF43Q68DV7 AC108667.1-201ENST00000428618 249 ntBASIC2.13□□□□□ -2.07
RNF43Q68DV7 RNU6-687P-201ENST00000516443 89 ntBASIC2.13□□□□□ -2.07
RNF43Q68DV7 RNU6-807P-201ENST00000516805 107 ntBASIC2.13□□□□□ -2.07
RNF43Q68DV7 MIR3192-201ENST00000584920 77 ntBASIC2.13□□□□□ -2.07
RNF43Q68DV7 MIR664A-201ENST00000626086 82 ntBASIC2.13□□□□□ -2.07
RNF43Q68DV7 SLC9C2-201ENST00000367714 4428 ntAPPRIS P1 TSL 1 (best) BASIC2.13□□□□□ -2.07
RNF43Q68DV7 Y_RNA.491-201ENST00000384417 107 ntBASIC2.12□□□□□ -2.07
RNF43Q68DV7 MIR520H-201ENST00000385126 88 ntBASIC2.12□□□□□ -2.07
RNF43Q68DV7 RNU6ATAC38P-201ENST00000408119 126 ntBASIC2.12□□□□□ -2.07
RNF43Q68DV7 RNA5SP364-201ENST00000516938 78 ntBASIC2.12□□□□□ -2.07
RNF43Q68DV7 snoU13.31-201ENST00000607291 104 ntBASIC2.12□□□□□ -2.07
RNF43Q68DV7 uc_338.20-201ENST00000621563 178 ntBASIC2.12□□□□□ -2.07
RNF43Q68DV7 SCN7A-201ENST00000409855 7183 ntAPPRIS P1 TSL 1 (best) BASIC2.11□□□□□ -2.07
RNF43Q68DV7 MIRLET7F1-201ENST00000362202 87 ntBASIC2.11□□□□□ -2.07
RNF43Q68DV7 SNORA25.3-201ENST00000363205 127 ntBASIC2.11□□□□□ -2.07
RNF43Q68DV7 SNORA3A-201ENST00000364113 130 ntBASIC2.11□□□□□ -2.07
RNF43Q68DV7 SUMO2P12-201ENST00000405924 140 ntBASIC2.11□□□□□ -2.07
RNF43Q68DV7 RNU6-1165P-201ENST00000410119 107 ntBASIC2.11□□□□□ -2.07
RNF43Q68DV7 RNA5SP450-201ENST00000411206 102 ntBASIC2.11□□□□□ -2.07
RNF43Q68DV7 AC245517.4-201ENST00000448601 281 ntBASIC2.11□□□□□ -2.07
RNF43Q68DV7 RNU7-106P-201ENST00000459514 67 ntBASIC2.11□□□□□ -2.07
RNF43Q68DV7 Y_RNA.681-201ENST00000516445 113 ntBASIC2.11□□□□□ -2.07
RNF43Q68DV7 AL357312.1-201ENST00000603879 298 ntBASIC2.11□□□□□ -2.07
RNF43Q68DV7 C9orf84-205ENST00000394779 5060 ntAPPRIS ALT2 TSL 2 BASIC2.11□□□□□ -2.07
RNF43Q68DV7 FSIP2-206ENST00000611759 3882 ntAPPRIS ALT2 TSL 5 BASIC2.1□□□□□ -2.07
RNF43Q68DV7 RNU6-208P-201ENST00000362431 107 ntBASIC2.1□□□□□ -2.07
RNF43Q68DV7 RNU6-396P-201ENST00000365369 105 ntBASIC2.1□□□□□ -2.07
RNF43Q68DV7 RNA5SP259-201ENST00000365541 109 ntBASIC2.1□□□□□ -2.07
RNF43Q68DV7 SNORD41-201ENST00000386967 70 ntBASIC2.1□□□□□ -2.07
RNF43Q68DV7 MIR548U-201ENST00000390728 81 ntBASIC2.1□□□□□ -2.07
RNF43Q68DV7 RNU6-205P-201ENST00000390858 107 ntBASIC2.1□□□□□ -2.07
RNF43Q68DV7 SNORD90-201ENST00000391145 111 ntBASIC2.1□□□□□ -2.07
RNF43Q68DV7 AC015818.7-201ENST00000428754 109 ntBASIC2.1□□□□□ -2.07
RNF43Q68DV7 RNU6-634P-201ENST00000459134 106 ntBASIC2.1□□□□□ -2.07
RNF43Q68DV7 SNORD92-201ENST00000585078 85 ntBASIC2.1□□□□□ -2.07
RNF43Q68DV7 TRAJ36-201ENST00000614481 58 ntAPPRIS P1 BASIC2.1□□□□□ -2.07
RNF43Q68DV7 MIR1297-201ENST00000637311 77 ntBASIC2.1□□□□□ -2.07
RNF43Q68DV7 XIRP2-201ENST00000295237 5246 ntTSL 2 BASIC2.09□□□□□ -2.07
RNF43Q68DV7 Y_RNA.264-201ENST00000364665 102 ntBASIC2.09□□□□□ -2.07
RNF43Q68DV7 RNU6-466P-201ENST00000391224 103 ntBASIC2.09□□□□□ -2.07
RNF43Q68DV7 MIR1265-201ENST00000408444 86 ntBASIC2.09□□□□□ -2.07
RNF43Q68DV7 RNU6-922P-201ENST00000516753 99 ntBASIC2.09□□□□□ -2.07
RNF43Q68DV7 MIR4529-201ENST00000578110 78 ntBASIC2.09□□□□□ -2.07
RNF43Q68DV7 MIER3-204ENST00000381226 5210 ntAPPRIS ALT1 TSL 1 (best) BASIC2.08□□□□□ -2.08
RNF43Q68DV7 PYGO1-201ENST00000302000 8488 ntTSL 1 (best) BASIC2.08□□□□□ -2.08
RNF43Q68DV7 MIR378A-201ENST00000362177 66 ntBASIC2.08□□□□□ -2.08
RNF43Q68DV7 RNU6-957P-201ENST00000363652 99 ntBASIC2.08□□□□□ -2.08
RNF43Q68DV7 IL6ST-207ENST00000396816 168 ntTSL 1 (best) BASIC2.08□□□□□ -2.08
Retrieved 100 of 98,524 protein–RNA pairs in 250.4 ms