Protein–RNA interactions for Protein: Q00653

NFKB2, Nuclear factor NF-kappa-B p100 subunit, humanhuman

Predictions only

Length 900 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NFKB2Q00653 HSBP1P2-201ENST00000299671 229 ntBASIC2.08□□□□□ -2.08
NFKB2Q00653 MIR635-201ENST00000384830 98 ntBASIC2.08□□□□□ -2.08
NFKB2Q00653 HMGN1P33-201ENST00000432945 451 ntBASIC2.08□□□□□ -2.08
NFKB2Q00653 AC093850.1-201ENST00000454121 251 ntBASIC2.08□□□□□ -2.08
NFKB2Q00653 AC005908.1-201ENST00000468701 347 ntBASIC2.08□□□□□ -2.08
NFKB2Q00653 MIR8066-201ENST00000617280 78 ntBASIC2.08□□□□□ -2.08
NFKB2Q00653 AP000553.5-201ENST00000641933 54 ntBASIC2.08□□□□□ -2.08
NFKB2Q00653 SCN7A-201ENST00000409855 7183 ntAPPRIS P1 TSL 1 (best) BASIC2.08□□□□□ -2.08
NFKB2Q00653 RNA5SP259-201ENST00000365541 109 ntBASIC2.07□□□□□ -2.08
NFKB2Q00653 RNU6-499P-201ENST00000365615 107 ntBASIC2.07□□□□□ -2.08
NFKB2Q00653 MIR516B2-201ENST00000385190 85 ntBASIC2.07□□□□□ -2.08
NFKB2Q00653 U8.13-201ENST00000390842 128 ntBASIC2.07□□□□□ -2.08
NFKB2Q00653 Y_RNA.596-201ENST00000410462 109 ntBASIC2.07□□□□□ -2.08
NFKB2Q00653 TTTY16-201ENST00000437686 192 ntTSL 1 (best) BASIC2.07□□□□□ -2.08
NFKB2Q00653 AC093423.1-201ENST00000440817 142 ntBASIC2.07□□□□□ -2.08
NFKB2Q00653 HSPE1P24-201ENST00000450782 238 ntBASIC2.07□□□□□ -2.08
NFKB2Q00653 AC079804.2-201ENST00000490376 200 ntBASIC2.07□□□□□ -2.08
NFKB2Q00653 MIR6845-201ENST00000613182 61 ntBASIC2.07□□□□□ -2.08
NFKB2Q00653 MIR8065-201ENST00000620577 100 ntBASIC2.07□□□□□ -2.08
NFKB2Q00653 MIR664A-201ENST00000626086 82 ntBASIC2.07□□□□□ -2.08
NFKB2Q00653 AC068733.3-201ENST00000632757 269 ntTSL 3 BASIC2.07□□□□□ -2.08
NFKB2Q00653 TBL1XR1-208ENST00000430069 7948 ntAPPRIS P1 TSL 1 (best) BASIC2.07□□□□□ -2.08
NFKB2Q00653 Y_RNA.354-201ENST00000365448 111 ntBASIC2.06□□□□□ -2.08
NFKB2Q00653 MIR452-201ENST00000385020 85 ntBASIC2.06□□□□□ -2.08
NFKB2Q00653 MIR520H-201ENST00000385126 88 ntBASIC2.06□□□□□ -2.08
NFKB2Q00653 MIR136-201ENST00000385207 82 ntBASIC2.06□□□□□ -2.08
NFKB2Q00653 SNORD77.2-201ENST00000391045 68 ntBASIC2.06□□□□□ -2.08
NFKB2Q00653 MIR8055-201ENST00000610739 97 ntBASIC2.06□□□□□ -2.08
NFKB2Q00653 MIR8063-201ENST00000621930 81 ntBASIC2.06□□□□□ -2.08
NFKB2Q00653 ST7-AS2_1.1-201ENST00000622900 72 ntBASIC2.06□□□□□ -2.08
NFKB2Q00653 OR5M1-202ENST00000641076 4302 ntAPPRIS P1 BASIC2.05□□□□□ -2.08
NFKB2Q00653 ZNF355P-201ENST00000427301 3216 ntBASIC2.05□□□□□ -2.08
NFKB2Q00653 Y_RNA.264-201ENST00000364665 102 ntBASIC2.05□□□□□ -2.08
NFKB2Q00653 MIR489-201ENST00000384923 84 ntBASIC2.05□□□□□ -2.08
NFKB2Q00653 TRAJ49-201ENST00000390488 56 ntAPPRIS P1 BASIC2.05□□□□□ -2.08
NFKB2Q00653 RNU6-663P-201ENST00000391105 106 ntBASIC2.05□□□□□ -2.08
NFKB2Q00653 SNORA17.3-201ENST00000391159 129 ntBASIC2.05□□□□□ -2.08
NFKB2Q00653 SNORA26.9-201ENST00000391322 122 ntBASIC2.05□□□□□ -2.08
NFKB2Q00653 RNA5SP338-201ENST00000410495 85 ntBASIC2.05□□□□□ -2.08
NFKB2Q00653 AC074348.1-201ENST00000426503 132 ntBASIC2.05□□□□□ -2.08
NFKB2Q00653 Y_RNA.648-201ENST00000459455 110 ntBASIC2.05□□□□□ -2.08
NFKB2Q00653 RNU1-40P-201ENST00000516816 164 ntBASIC2.05□□□□□ -2.08
NFKB2Q00653 RNU1-97P-201ENST00000516872 164 ntBASIC2.05□□□□□ -2.08
NFKB2Q00653 RNU6-303P-201ENST00000517091 106 ntBASIC2.05□□□□□ -2.08
NFKB2Q00653 MIR548AR-201ENST00000582191 57 ntBASIC2.05□□□□□ -2.08
NFKB2Q00653 FAM13A-AS1_1.1-201ENST00000612555 119 ntBASIC2.05□□□□□ -2.08
NFKB2Q00653 SNORD33-201ENST00000362761 85 ntBASIC2.04□□□□□ -2.08
NFKB2Q00653 RNA5SP160-201ENST00000364866 120 ntBASIC2.04□□□□□ -2.08
NFKB2Q00653 OMD-201ENST00000375550 2449 ntAPPRIS P1 TSL 1 (best) BASIC2.04□□□□□ -2.08
NFKB2Q00653 RNU6-811P-201ENST00000384069 107 ntBASIC2.04□□□□□ -2.08
NFKB2Q00653 RNU6-1241P-201ENST00000384536 107 ntBASIC2.04□□□□□ -2.08
NFKB2Q00653 Y_RNA.537-201ENST00000384626 109 ntBASIC2.04□□□□□ -2.08
NFKB2Q00653 RNA5SP292-201ENST00000390974 118 ntBASIC2.04□□□□□ -2.08
NFKB2Q00653 SNORD28B-201ENST00000390993 75 ntBASIC2.04□□□□□ -2.08
NFKB2Q00653 snoU13.16-201ENST00000459350 104 ntBASIC2.04□□□□□ -2.08
NFKB2Q00653 RPS29P11-201ENST00000496507 171 ntBASIC2.04□□□□□ -2.08
NFKB2Q00653 OXR1-209ENST00000517566 4501 ntTSL 1 (best) BASIC2.04□□□□□ -2.08
NFKB2Q00653 MIR219B-201ENST00000637023 88 ntBASIC2.04□□□□□ -2.08
NFKB2Q00653 MIR302D-201ENST00000362275 68 ntBASIC2.03□□□□□ -2.08
NFKB2Q00653 SNORD1A-201ENST00000364968 72 ntBASIC2.03□□□□□ -2.08
NFKB2Q00653 MIR9-2-201ENST00000384838 87 ntBASIC2.03□□□□□ -2.08
NFKB2Q00653 MIR934-201ENST00000401241 83 ntBASIC2.03□□□□□ -2.08
NFKB2Q00653 RNU4-83P-201ENST00000410863 133 ntBASIC2.03□□□□□ -2.08
NFKB2Q00653 AP000753.3-201ENST00000604083 169 ntBASIC2.03□□□□□ -2.08
NFKB2Q00653 SNORD115-31-201ENST00000365318 82 ntBASIC2.02□□□□□ -2.09
NFKB2Q00653 RNU6-1067P-201ENST00000384752 107 ntBASIC2.02□□□□□ -2.09
NFKB2Q00653 MIR154-201ENST00000385243 84 ntBASIC2.02□□□□□ -2.09
NFKB2Q00653 SNORD123-201ENST00000459473 70 ntBASIC2.02□□□□□ -2.09
NFKB2Q00653 AC079140.2-201ENST00000506193 142 ntBASIC2.02□□□□□ -2.09
NFKB2Q00653 SNORA18.5-201ENST00000516616 101 ntBASIC2.02□□□□□ -2.09
NFKB2Q00653 RNU7-156P-201ENST00000517214 74 ntBASIC2.02□□□□□ -2.09
NFKB2Q00653 AC005520.4-201ENST00000604337 90 ntBASIC2.02□□□□□ -2.09
NFKB2Q00653 NEAT1_2.1-201ENST00000620525 105 ntBASIC2.02□□□□□ -2.09
NFKB2Q00653 Z97988.1-201ENST00000637697 135 ntBASIC2.02□□□□□ -2.09
NFKB2Q00653 WWP1P1-201ENST00000466609 2769 ntBASIC2.01□□□□□ -2.09
NFKB2Q00653 RNY1P13-201ENST00000365030 105 ntBASIC2.01□□□□□ -2.09
NFKB2Q00653 SNRPGP12-201ENST00000449481 213 ntBASIC2.01□□□□□ -2.09
NFKB2Q00653 snoU13.31-201ENST00000607291 104 ntBASIC2.01□□□□□ -2.09
NFKB2Q00653 MIR8070-201ENST00000616510 88 ntBASIC2.01□□□□□ -2.09
NFKB2Q00653 AC008163.1-205ENST00000413944 4649 ntTSL 1 (best) BASIC2.01□□□□□ -2.09
NFKB2Q00653 PI15-201ENST00000260113 6732 ntAPPRIS P1 TSL 1 (best) BASIC2.01□□□□□ -2.09
NFKB2Q00653 RNU6-208P-201ENST00000362431 107 ntBASIC2□□□□□ -2.09
NFKB2Q00653 MIR583-201ENST00000384846 75 ntBASIC2□□□□□ -2.09
NFKB2Q00653 MIR653-201ENST00000385279 96 ntBASIC2□□□□□ -2.09
NFKB2Q00653 RNU1-78P-201ENST00000391248 165 ntBASIC2□□□□□ -2.09
NFKB2Q00653 AC015818.7-201ENST00000428754 109 ntBASIC2□□□□□ -2.09
NFKB2Q00653 RNU6-322P-201ENST00000516010 103 ntBASIC2□□□□□ -2.09
NFKB2Q00653 AC133485.1-201ENST00000567176 124 ntBASIC2□□□□□ -2.09
NFKB2Q00653 MIR4422-201ENST00000581938 83 ntBASIC2□□□□□ -2.09
NFKB2Q00653 CALCRL-201ENST00000392370 5155 ntAPPRIS P1 TSL 1 (best) BASIC2□□□□□ -2.09
NFKB2Q00653 AP000648.3-201ENST00000623539 4507 ntBASIC1.99□□□□□ -2.09
NFKB2Q00653 MIR378A-201ENST00000362177 66 ntBASIC1.99□□□□□ -2.09
NFKB2Q00653 RNY1P2-201ENST00000364820 117 ntBASIC1.99□□□□□ -2.09
NFKB2Q00653 RNU4-52P-201ENST00000384209 138 ntBASIC1.99□□□□□ -2.09
NFKB2Q00653 SNORA72.6-201ENST00000384520 129 ntBASIC1.99□□□□□ -2.09
NFKB2Q00653 MIR499A-201ENST00000384903 122 ntBASIC1.99□□□□□ -2.09
NFKB2Q00653 RNU6-205P-201ENST00000390858 107 ntBASIC1.99□□□□□ -2.09
NFKB2Q00653 RNU6-321P-201ENST00000410912 106 ntBASIC1.99□□□□□ -2.09
NFKB2Q00653 AC023790.1-201ENST00000482174 347 ntBASIC1.99□□□□□ -2.09
NFKB2Q00653 AC090897.1-201ENST00000580909 226 ntBASIC1.99□□□□□ -2.09
Retrieved 100 of 98,524 protein–RNA pairs in 216.7 ms