Protein–RNA interactions for Protein: P83916

CBX1, Chromobox protein homolog 1, humanhuman

Predictions only

Length 185 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CBX1P83916 NAMPTP3-201ENST00000569273 224 ntBASIC-0.54□□□□□ -2.5
CBX1P83916 MIR4500-201ENST00000579472 76 ntBASIC-0.54□□□□□ -2.5
CBX1P83916 Y_RNA.54-201ENST00000362766 105 ntBASIC-0.55□□□□□ -2.5
CBX1P83916 MIR106A-201ENST00000384870 81 ntBASIC-0.55□□□□□ -2.5
CBX1P83916 RNU6-493P-201ENST00000391321 108 ntBASIC-0.55□□□□□ -2.5
CBX1P83916 MIR876-201ENST00000401147 81 ntBASIC-0.55□□□□□ -2.5
CBX1P83916 RNA5SP484-201ENST00000458857 111 ntBASIC-0.55□□□□□ -2.5
CBX1P83916 RNA5SP236-201ENST00000516169 116 ntBASIC-0.55□□□□□ -2.5
CBX1P83916 RNU2-35P-201ENST00000516446 142 ntBASIC-0.55□□□□□ -2.5
CBX1P83916 RNU6-635P-201ENST00000516651 102 ntBASIC-0.55□□□□□ -2.5
CBX1P83916 CYP19A1-220ENST00000613097 123 ntTSL 5 BASIC-0.55□□□□□ -2.5
CBX1P83916 MIR8062-201ENST00000621515 85 ntBASIC-0.55□□□□□ -2.5
CBX1P83916 Y_RNA.277-201ENST00000364754 102 ntBASIC-0.56□□□□□ -2.5
CBX1P83916 Y_RNA.357-201ENST00000365487 109 ntBASIC-0.56□□□□□ -2.5
CBX1P83916 RNU6-1336P-201ENST00000383886 109 ntBASIC-0.56□□□□□ -2.5
CBX1P83916 Y_RNA.518-201ENST00000384552 113 ntBASIC-0.56□□□□□ -2.5
CBX1P83916 RNU6-1321P-201ENST00000390905 107 ntBASIC-0.56□□□□□ -2.5
CBX1P83916 hsa-mir-3130-1.1-201ENST00000579223 75 ntBASIC-0.56□□□□□ -2.5
CBX1P83916 MIR3666-201ENST00000607845 111 ntBASIC-0.56□□□□□ -2.5
CBX1P83916 AC011603.4-201ENST00000611325 277 ntBASIC-0.56□□□□□ -2.5
CBX1P83916 MIR6759-201ENST00000638110 65 ntBASIC-0.56□□□□□ -2.5
CBX1P83916 Y_RNA.61-201ENST00000362835 102 ntBASIC-0.57□□□□□ -2.5
CBX1P83916 Y_RNA.182-201ENST00000363880 111 ntBASIC-0.57□□□□□ -2.5
CBX1P83916 Y_RNA.521-201ENST00000384560 114 ntBASIC-0.57□□□□□ -2.5
CBX1P83916 BX276092.1-201ENST00000427368 251 ntBASIC-0.57□□□□□ -2.5
CBX1P83916 SNORA25.13-201ENST00000516395 103 ntBASIC-0.57□□□□□ -2.5
CBX1P83916 MIR4802-201ENST00000581881 80 ntBASIC-0.57□□□□□ -2.5
CBX1P83916 RNU6-238P-201ENST00000363313 106 ntBASIC-0.58□□□□□ -2.5
CBX1P83916 SNORD114-28-201ENST00000363610 72 ntBASIC-0.58□□□□□ -2.5
CBX1P83916 SNORD49B-201ENST00000365172 72 ntBASIC-0.58□□□□□ -2.5
CBX1P83916 Y_RNA.549-201ENST00000384657 102 ntBASIC-0.58□□□□□ -2.5
CBX1P83916 Y_RNA.571-201ENST00000384753 98 ntBASIC-0.58□□□□□ -2.5
CBX1P83916 AC109327.2-201ENST00000448339 378 ntBASIC-0.58□□□□□ -2.5
CBX1P83916 RNU7-48P-201ENST00000458875 63 ntBASIC-0.58□□□□□ -2.5
CBX1P83916 MTND1P19-201ENST00000511780 315 ntBASIC-0.58□□□□□ -2.5
CBX1P83916 RNU6-320P-201ENST00000516511 106 ntBASIC-0.58□□□□□ -2.5
CBX1P83916 IGHVII-40-1-201ENST00000517316 58 ntBASIC-0.58□□□□□ -2.5
CBX1P83916 EBAG9-207ENST00000531677 777 ntTSL 1 (best) BASIC-0.58□□□□□ -2.5
CBX1P83916 Y_RNA.299-201ENST00000364973 94 ntBASIC-0.59□□□□□ -2.5
CBX1P83916 RNU4-69P-201ENST00000410677 143 ntBASIC-0.59□□□□□ -2.5
CBX1P83916 MIR1270-201ENST00000459320 83 ntBASIC-0.59□□□□□ -2.5
CBX1P83916 MIR4645-201ENST00000583158 77 ntBASIC-0.59□□□□□ -2.5
CBX1P83916 AC021443.1-201ENST00000604478 211 ntBASIC-0.59□□□□□ -2.5
CBX1P83916 Y_RNA.98-201ENST00000363109 102 ntBASIC-0.6□□□□□ -2.51
CBX1P83916 Y_RNA.170-201ENST00000363746 110 ntBASIC-0.6□□□□□ -2.51
CBX1P83916 RNU6-275P-201ENST00000364910 107 ntBASIC-0.6□□□□□ -2.51
CBX1P83916 Y_RNA.323-201ENST00000365157 109 ntBASIC-0.6□□□□□ -2.51
CBX1P83916 Y_RNA.448-201ENST00000384185 108 ntBASIC-0.6□□□□□ -2.51
CBX1P83916 MIR516B1-201ENST00000385211 90 ntBASIC-0.6□□□□□ -2.51
CBX1P83916 MIR548I2-201ENST00000408348 149 ntBASIC-0.6□□□□□ -2.51
CBX1P83916 AC023051.1-201ENST00000414098 876 ntTSL 5 BASIC-0.6□□□□□ -2.51
CBX1P83916 MTND4LP11-201ENST00000422184 280 ntBASIC-0.6□□□□□ -2.51
CBX1P83916 RNU7-74P-201ENST00000459104 62 ntBASIC-0.6□□□□□ -2.51
CBX1P83916 RNU6-240P-201ENST00000516098 97 ntBASIC-0.6□□□□□ -2.51
CBX1P83916 AC138907.4-201ENST00000570107 226 ntBASIC-0.6□□□□□ -2.51
CBX1P83916 RNU6-865P-201ENST00000364772 107 ntBASIC-0.61□□□□□ -2.51
CBX1P83916 MIR206-201ENST00000384872 86 ntBASIC-0.61□□□□□ -2.51
CBX1P83916 RNA5SP300-201ENST00000391197 107 ntBASIC-0.61□□□□□ -2.51
CBX1P83916 RNU7-164P-201ENST00000459221 62 ntBASIC-0.61□□□□□ -2.51
CBX1P83916 RNU7-13P-201ENST00000516413 62 ntBASIC-0.61□□□□□ -2.51
CBX1P83916 MIR3920-201ENST00000581751 86 ntBASIC-0.61□□□□□ -2.51
CBX1P83916 MIR8064-201ENST00000612863 90 ntBASIC-0.61□□□□□ -2.51
CBX1P83916 RNY4P28-201ENST00000365281 93 ntBASIC-0.62□□□□□ -2.51
CBX1P83916 RNU6-472P-201ENST00000384299 107 ntBASIC-0.62□□□□□ -2.51
CBX1P83916 MIR519A1-201ENST00000385257 85 ntBASIC-0.62□□□□□ -2.51
CBX1P83916 SNORD77B-201ENST00000391112 67 ntBASIC-0.62□□□□□ -2.51
CBX1P83916 MTATP6P21-201ENST00000440681 189 ntBASIC-0.62□□□□□ -2.51
CBX1P83916 Y_RNA.809-201ENST00000516058 95 ntBASIC-0.62□□□□□ -2.51
CBX1P83916 AP001362.1-201ENST00000625165 124 ntBASIC-0.62□□□□□ -2.51
CBX1P83916 NFIA-AS1-206ENST00000630199 220 ntTSL 5 BASIC-0.62□□□□□ -2.51
CBX1P83916 AL162726.3-218ENST00000636401 95 ntBASIC-0.62□□□□□ -2.51
CBX1P83916 RNA5SP275-201ENST00000363936 118 ntBASIC-0.63□□□□□ -2.51
CBX1P83916 Y_RNA.270-201ENST00000364693 104 ntBASIC-0.63□□□□□ -2.51
CBX1P83916 MTATP8P1-201ENST00000467115 207 ntBASIC-0.63□□□□□ -2.51
CBX1P83916 AC104211.3-201ENST00000518861 270 ntTSL 3 BASIC-0.63□□□□□ -2.51
CBX1P83916 MIR4263-201ENST00000584745 83 ntBASIC-0.63□□□□□ -2.51
CBX1P83916 AP001180.6-201ENST00000584918 159 ntBASIC-0.63□□□□□ -2.51
CBX1P83916 SNORD63B-201ENST00000411005 70 ntBASIC-0.64□□□□□ -2.51
CBX1P83916 AC096531.1-201ENST00000419107 107 ntBASIC-0.64□□□□□ -2.51
CBX1P83916 MTCYBP6-201ENST00000441810 138 ntBASIC-0.64□□□□□ -2.51
CBX1P83916 RNU7-195P-201ENST00000458793 62 ntBASIC-0.64□□□□□ -2.51
CBX1P83916 RNU7-123P-201ENST00000515911 60 ntBASIC-0.64□□□□□ -2.51
CBX1P83916 MIR5589-201ENST00000579442 60 ntBASIC-0.64□□□□□ -2.51
CBX1P83916 MIR4308-201ENST00000580634 81 ntBASIC-0.64□□□□□ -2.51
CBX1P83916 RNA5SP98-201ENST00000363158 137 ntBASIC-0.65□□□□□ -2.51
CBX1P83916 RNU6-818P-201ENST00000364837 108 ntBASIC-0.65□□□□□ -2.51
CBX1P83916 Y_RNA.562-201ENST00000384695 113 ntBASIC-0.65□□□□□ -2.51
CBX1P83916 Y_RNA.574-201ENST00000384766 95 ntBASIC-0.65□□□□□ -2.51
CBX1P83916 MIR548H3-201ENST00000408771 118 ntBASIC-0.65□□□□□ -2.51
CBX1P83916 DEFB131B-201ENST00000530210 213 ntAPPRIS P1 TSL 1 (best) BASIC-0.65□□□□□ -2.51
CBX1P83916 AC044792.1-201ENST00000593294 196 ntBASIC-0.65□□□□□ -2.51
CBX1P83916 RNU6-170P-201ENST00000362832 104 ntBASIC-0.66□□□□□ -2.52
CBX1P83916 Y_RNA.127-201ENST00000363386 109 ntBASIC-0.66□□□□□ -2.52
CBX1P83916 RNU6-1082P-201ENST00000364574 107 ntBASIC-0.66□□□□□ -2.52
CBX1P83916 RNU6-768P-201ENST00000384683 107 ntBASIC-0.66□□□□□ -2.52
CBX1P83916 MTND5P40-201ENST00000559945 246 ntBASIC-0.66□□□□□ -2.52
CBX1P83916 Y_RNA.75-201ENST00000362927 97 ntBASIC-0.67□□□□□ -2.52
CBX1P83916 RNU1-141P-201ENST00000364623 158 ntBASIC-0.67□□□□□ -2.52
CBX1P83916 RNU6-524P-201ENST00000384270 107 ntBASIC-0.67□□□□□ -2.52
CBX1P83916 RNU7-2P-201ENST00000516096 62 ntBASIC-0.67□□□□□ -2.52
Retrieved 100 of 98,524 protein–RNA pairs in 232.9 ms