Protein–RNA interactions for Protein: P61960

UFM1, Ubiquitin-fold modifier 1, humanhuman

Predictions only

Length 85 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UFM1P61960 RNU7-6P-201ENST00000516845 62 ntBASIC0.48□□□□□ -2.33
UFM1P61960 MIR3163-201ENST00000581592 73 ntBASIC0.48□□□□□ -2.33
UFM1P61960 MIR4298-201ENST00000584380 73 ntBASIC0.48□□□□□ -2.33
UFM1P61960 Y_RNA.56-201ENST00000362798 112 ntBASIC0.47□□□□□ -2.33
UFM1P61960 Y_RNA.198-201ENST00000364013 98 ntBASIC0.47□□□□□ -2.33
UFM1P61960 Y_RNA.213-201ENST00000364178 111 ntBASIC0.47□□□□□ -2.33
UFM1P61960 RNU6-616P-201ENST00000384353 107 ntBASIC0.47□□□□□ -2.33
UFM1P61960 MIR518A1-201ENST00000385068 85 ntBASIC0.47□□□□□ -2.33
UFM1P61960 MIR1263-201ENST00000408324 86 ntBASIC0.47□□□□□ -2.33
UFM1P61960 SNORD71-201ENST00000411292 86 ntBASIC0.47□□□□□ -2.33
UFM1P61960 RNY1P10-201ENST00000363268 113 ntBASIC0.46□□□□□ -2.34
UFM1P61960 SNORD115-35-201ENST00000365122 82 ntBASIC0.46□□□□□ -2.34
UFM1P61960 Y_RNA.338-201ENST00000365320 114 ntBASIC0.46□□□□□ -2.34
UFM1P61960 RNU6-209P-201ENST00000384118 107 ntBASIC0.46□□□□□ -2.34
UFM1P61960 SNORA8.2-201ENST00000384372 139 ntBASIC0.46□□□□□ -2.34
UFM1P61960 Y_RNA.506-201ENST00000384494 102 ntBASIC0.46□□□□□ -2.34
UFM1P61960 Y_RNA.568-201ENST00000384742 113 ntBASIC0.46□□□□□ -2.34
UFM1P61960 MIR548I1-201ENST00000408810 149 ntBASIC0.46□□□□□ -2.34
UFM1P61960 AC087741.2-201ENST00000619415 172 ntBASIC0.46□□□□□ -2.34
UFM1P61960 RNU6-1229P-201ENST00000364295 107 ntBASIC0.45□□□□□ -2.34
UFM1P61960 SNORA40-201ENST00000388090 126 ntBASIC0.45□□□□□ -2.34
UFM1P61960 TRAJ22-201ENST00000390515 63 ntAPPRIS P1 BASIC0.45□□□□□ -2.34
UFM1P61960 MTND4LP9-201ENST00000427694 174 ntBASIC0.45□□□□□ -2.34
UFM1P61960 LINC00345-201ENST00000443679 285 ntTSL 5 BASIC0.45□□□□□ -2.34
UFM1P61960 SNORA68.3-201ENST00000515906 83 ntBASIC0.45□□□□□ -2.34
UFM1P61960 RNU6-1053P-201ENST00000515930 101 ntBASIC0.45□□□□□ -2.34
UFM1P61960 AC009093.3-203ENST00000565800 121 ntTSL 2 BASIC0.45□□□□□ -2.34
UFM1P61960 MIR4714-201ENST00000580728 77 ntBASIC0.45□□□□□ -2.34
UFM1P61960 MIR4639-201ENST00000584938 69 ntBASIC0.45□□□□□ -2.34
UFM1P61960 SNORD115-19-201ENST00000363098 82 ntBASIC0.44□□□□□ -2.34
UFM1P61960 SNORD115-18-201ENST00000363293 82 ntBASIC0.44□□□□□ -2.34
UFM1P61960 SNORA36.1-201ENST00000363424 132 ntBASIC0.44□□□□□ -2.34
UFM1P61960 SNORD118-201ENST00000363593 134 ntBASIC0.44□□□□□ -2.34
UFM1P61960 SNORD115-17-201ENST00000364612 82 ntBASIC0.44□□□□□ -2.34
UFM1P61960 Y_RNA.328-201ENST00000365208 113 ntBASIC0.44□□□□□ -2.34
UFM1P61960 MT-TI-201ENST00000387365 69 ntBASIC0.44□□□□□ -2.34
UFM1P61960 AC098934.3-201ENST00000430450 190 ntBASIC0.44□□□□□ -2.34
UFM1P61960 AC087277.2-201ENST00000533203 151 ntTSL 5 BASIC0.44□□□□□ -2.34
UFM1P61960 MIR548H5-201ENST00000580314 60 ntBASIC0.44□□□□□ -2.34
UFM1P61960 AP001362.1-201ENST00000625165 124 ntBASIC0.44□□□□□ -2.34
UFM1P61960 UGP2-230ENST00000626380 276 ntTSL 5 BASIC0.44□□□□□ -2.34
UFM1P61960 RNA5SP245-201ENST00000364239 121 ntBASIC0.43□□□□□ -2.34
UFM1P61960 RNU6-865P-201ENST00000364772 107 ntBASIC0.43□□□□□ -2.34
UFM1P61960 Y_RNA.528-201ENST00000384575 108 ntBASIC0.43□□□□□ -2.34
UFM1P61960 SNORD28-201ENST00000384706 75 ntBASIC0.43□□□□□ -2.34
UFM1P61960 RNU6-346P-201ENST00000516288 111 ntBASIC0.43□□□□□ -2.34
UFM1P61960 SCARNA16.5-201ENST00000517114 183 ntBASIC0.43□□□□□ -2.34
UFM1P61960 RNA5SP47-201ENST00000517230 109 ntBASIC0.43□□□□□ -2.34
UFM1P61960 MIR4500-201ENST00000579472 76 ntBASIC0.43□□□□□ -2.34
UFM1P61960 RNU7-10P-201ENST00000607194 63 ntBASIC0.43□□□□□ -2.34
UFM1P61960 VPS35-212ENST00000640313 141 ntTSL 5 BASIC0.43□□□□□ -2.34
UFM1P61960 HECTD2-202ENST00000371667 4354 ntTSL 1 (best) BASIC0.42□□□□□ -2.34
UFM1P61960 MIRLET7D-201ENST00000362263 87 ntBASIC0.42□□□□□ -2.34
UFM1P61960 Y_RNA.127-201ENST00000363386 109 ntBASIC0.42□□□□□ -2.34
UFM1P61960 RNU6-1307P-201ENST00000391012 103 ntBASIC0.42□□□□□ -2.34
UFM1P61960 RNU6-781P-201ENST00000516377 101 ntBASIC0.42□□□□□ -2.34
UFM1P61960 RNA5SP268-201ENST00000516828 124 ntBASIC0.42□□□□□ -2.34
UFM1P61960 AC138869.1-201ENST00000568623 124 ntBASIC0.42□□□□□ -2.34
UFM1P61960 SNORA25.18-201ENST00000607153 114 ntBASIC0.42□□□□□ -2.34
UFM1P61960 MIR6828-201ENST00000636181 60 ntBASIC0.42□□□□□ -2.34
UFM1P61960 RNU6-235P-201ENST00000362644 107 ntBASIC0.41□□□□□ -2.34
UFM1P61960 SNORA63.5-201ENST00000363548 123 ntBASIC0.41□□□□□ -2.34
UFM1P61960 SNORD114-22-201ENST00000365423 72 ntBASIC0.41□□□□□ -2.34
UFM1P61960 RNU6ATAC41P-201ENST00000408600 126 ntBASIC0.41□□□□□ -2.34
UFM1P61960 RNU6-257P-201ENST00000410238 98 ntBASIC0.41□□□□□ -2.34
UFM1P61960 RPS29P1-201ENST00000465274 159 ntBASIC0.41□□□□□ -2.34
UFM1P61960 AC090625.1-201ENST00000357130 210 ntBASIC0.4□□□□□ -2.35
UFM1P61960 SNORD44.1-201ENST00000363202 61 ntBASIC0.4□□□□□ -2.35
UFM1P61960 MIR539-201ENST00000365690 78 ntBASIC0.4□□□□□ -2.35
UFM1P61960 MIR216A-201ENST00000385063 110 ntBASIC0.4□□□□□ -2.35
UFM1P61960 AC114737.2-201ENST00000421583 173 ntBASIC0.4□□□□□ -2.35
UFM1P61960 AC092628.1-201ENST00000436250 252 ntBASIC0.4□□□□□ -2.35
UFM1P61960 SUMO1P3-201ENST00000439961 304 ntBASIC0.4□□□□□ -2.35
UFM1P61960 AC244505.6-201ENST00000452829 130 ntBASIC0.4□□□□□ -2.35
UFM1P61960 RNU6-237P-201ENST00000515985 71 ntBASIC0.4□□□□□ -2.35
UFM1P61960 RNU6-229P-201ENST00000516614 102 ntBASIC0.4□□□□□ -2.35
UFM1P61960 Y_RNA.773-201ENST00000607168 90 ntBASIC0.4□□□□□ -2.35
UFM1P61960 AC244669.1-204ENST00000621564 178 ntBASIC0.4□□□□□ -2.35
UFM1P61960 AC091304.10-201ENST00000641554 121 ntBASIC0.4□□□□□ -2.35
UFM1P61960 ZNF518A-209ENST00000614149 7911 ntAPPRIS P1 TSL 5 BASIC0.39□□□□□ -2.35
UFM1P61960 MIR635-201ENST00000384830 98 ntBASIC0.39□□□□□ -2.35
UFM1P61960 MIR1276-201ENST00000408707 83 ntBASIC0.39□□□□□ -2.35
UFM1P61960 RNU6-863P-201ENST00000515989 104 ntBASIC0.39□□□□□ -2.35
UFM1P61960 RNU6-1061P-201ENST00000516530 99 ntBASIC0.39□□□□□ -2.35
UFM1P61960 RNU6-521P-201ENST00000516663 105 ntBASIC0.39□□□□□ -2.35
UFM1P61960 AC025166.1-201ENST00000612411 163 ntBASIC0.39□□□□□ -2.35
UFM1P61960 MIR376B-201ENST00000614515 100 ntBASIC0.39□□□□□ -2.35
UFM1P61960 C9orf84-203ENST00000374287 4721 ntAPPRIS P3 TSL 5 BASIC0.39□□□□□ -2.35
UFM1P61960 SAMD9-203ENST00000620985 6754 ntAPPRIS P1 TSL 2 BASIC0.39□□□□□ -2.35
UFM1P61960 RNU6-1099P-201ENST00000363533 107 ntBASIC0.38□□□□□ -2.35
UFM1P61960 SNORD58C-201ENST00000365223 64 ntBASIC0.38□□□□□ -2.35
UFM1P61960 MIR548D2-201ENST00000384955 97 ntBASIC0.38□□□□□ -2.35
UFM1P61960 MIR548I2-201ENST00000408348 149 ntBASIC0.38□□□□□ -2.35
UFM1P61960 RNA5SP227-201ENST00000516184 113 ntBASIC0.38□□□□□ -2.35
UFM1P61960 RNY4P6-201ENST00000363667 96 ntBASIC0.37□□□□□ -2.35
UFM1P61960 Y_RNA.360-201ENST00000365512 102 ntBASIC0.37□□□□□ -2.35
UFM1P61960 RNU6-735P-201ENST00000410612 107 ntBASIC0.37□□□□□ -2.35
UFM1P61960 RNU6-1234P-201ENST00000516877 103 ntBASIC0.37□□□□□ -2.35
UFM1P61960 Y_RNA.49-201ENST00000362714 112 ntBASIC0.36□□□□□ -2.35
UFM1P61960 RNU2-59P-201ENST00000410482 191 ntBASIC0.36□□□□□ -2.35
Retrieved 100 of 98,524 protein–RNA pairs in 301.1 ms