Protein–RNA interactions for Protein: P56645

PER3, Period circadian protein homolog 3, humanhuman

Predictions only

Length 1,201 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PER3P56645 Y_RNA.155-201ENST00000363632 101 ntBASIC1.27□□□□□ -2.21
PER3P56645 RNU1-36P-201ENST00000365130 165 ntBASIC1.27□□□□□ -2.21
PER3P56645 Y_RNA.360-201ENST00000365512 102 ntBASIC1.27□□□□□ -2.21
PER3P56645 MIR150-201ENST00000385048 84 ntBASIC1.27□□□□□ -2.21
PER3P56645 TRAJ1-201ENST00000390536 62 ntAPPRIS P1 BASIC1.27□□□□□ -2.21
PER3P56645 Y_RNA.588-201ENST00000391254 102 ntBASIC1.27□□□□□ -2.21
PER3P56645 RNU6-733P-201ENST00000410759 104 ntBASIC1.27□□□□□ -2.21
PER3P56645 ATP6V0E1P1-201ENST00000412537 226 ntBASIC1.27□□□□□ -2.21
PER3P56645 AC023934.1-201ENST00000574529 2389 ntBASIC1.27□□□□□ -2.21
PER3P56645 Y_RNA.328-201ENST00000365208 113 ntBASIC1.26□□□□□ -2.21
PER3P56645 MIR34C-201ENST00000384831 77 ntBASIC1.26□□□□□ -2.21
PER3P56645 RPS26P5-201ENST00000418544 335 ntBASIC1.26□□□□□ -2.21
PER3P56645 AC138749.4-201ENST00000563970 127 ntBASIC1.26□□□□□ -2.21
PER3P56645 MIR4771-2-201ENST00000577758 74 ntBASIC1.26□□□□□ -2.21
PER3P56645 MIR4491-201ENST00000581087 68 ntBASIC1.26□□□□□ -2.21
PER3P56645 MIR4771-1-201ENST00000582617 74 ntBASIC1.26□□□□□ -2.21
PER3P56645 MIR376B-201ENST00000614515 100 ntBASIC1.26□□□□□ -2.21
PER3P56645 RNU6-1313P-201ENST00000362622 102 ntBASIC1.25□□□□□ -2.21
PER3P56645 Y_RNA.163-201ENST00000363702 113 ntBASIC1.25□□□□□ -2.21
PER3P56645 MIR577-201ENST00000385196 96 ntBASIC1.25□□□□□ -2.21
PER3P56645 RNU6-447P-201ENST00000410293 104 ntBASIC1.25□□□□□ -2.21
PER3P56645 RNU6-1118P-201ENST00000410382 104 ntBASIC1.25□□□□□ -2.21
PER3P56645 RNU6-1076P-201ENST00000410397 104 ntBASIC1.25□□□□□ -2.21
PER3P56645 RNU6-355P-201ENST00000410427 104 ntBASIC1.25□□□□□ -2.21
PER3P56645 RNU6-791P-201ENST00000410467 104 ntBASIC1.25□□□□□ -2.21
PER3P56645 RNU6-705P-201ENST00000410601 104 ntBASIC1.25□□□□□ -2.21
PER3P56645 RNU6-1100P-201ENST00000410691 104 ntBASIC1.25□□□□□ -2.21
PER3P56645 RNU6-860P-201ENST00000410860 104 ntBASIC1.25□□□□□ -2.21
PER3P56645 RNU6-1217P-201ENST00000411276 104 ntBASIC1.25□□□□□ -2.21
PER3P56645 RNU6-785P-201ENST00000411324 104 ntBASIC1.25□□□□□ -2.21
PER3P56645 RNU7-48P-201ENST00000458875 63 ntBASIC1.25□□□□□ -2.21
PER3P56645 RNU6-1018P-201ENST00000516577 106 ntBASIC1.25□□□□□ -2.21
PER3P56645 RNA5SP404-201ENST00000517118 132 ntBASIC1.25□□□□□ -2.21
PER3P56645 MIR3613-201ENST00000579844 87 ntBASIC1.25□□□□□ -2.21
PER3P56645 U6.90-201ENST00000614007 104 ntBASIC1.25□□□□□ -2.21
PER3P56645 U6.70-201ENST00000620287 104 ntBASIC1.25□□□□□ -2.21
PER3P56645 RNU6-1099P-201ENST00000363533 107 ntBASIC1.24□□□□□ -2.21
PER3P56645 SNORD93-201ENST00000408813 74 ntBASIC1.24□□□□□ -2.21
PER3P56645 SNORA19.1-201ENST00000410656 129 ntBASIC1.24□□□□□ -2.21
PER3P56645 MIR6515-201ENST00000619843 57 ntBASIC1.24□□□□□ -2.21
PER3P56645 RNY1P2-201ENST00000364820 117 ntBASIC1.23□□□□□ -2.21
PER3P56645 RNU6-53P-201ENST00000365367 106 ntBASIC1.23□□□□□ -2.21
PER3P56645 RNU6-1201P-201ENST00000384227 107 ntBASIC1.23□□□□□ -2.21
PER3P56645 Y_RNA.540-201ENST00000384638 111 ntBASIC1.23□□□□□ -2.21
PER3P56645 SNORD124-201ENST00000459577 104 ntBASIC1.23□□□□□ -2.21
PER3P56645 RNU6-1006P-201ENST00000516998 103 ntBASIC1.23□□□□□ -2.21
PER3P56645 AC133485.1-201ENST00000567176 124 ntBASIC1.23□□□□□ -2.21
PER3P56645 MIR4694-201ENST00000578534 80 ntBASIC1.23□□□□□ -2.21
PER3P56645 MIR4676-201ENST00000583078 72 ntBASIC1.23□□□□□ -2.21
PER3P56645 Y_RNA.98-201ENST00000363109 102 ntBASIC1.22□□□□□ -2.21
PER3P56645 RNA5SP133-201ENST00000363368 119 ntBASIC1.22□□□□□ -2.21
PER3P56645 SNORD114-26-201ENST00000363543 72 ntBASIC1.22□□□□□ -2.21
PER3P56645 RNU1-124P-201ENST00000363861 145 ntBASIC1.22□□□□□ -2.21
PER3P56645 RNU6-153P-201ENST00000364422 104 ntBASIC1.22□□□□□ -2.21
PER3P56645 Y_RNA.247-201ENST00000364500 92 ntBASIC1.22□□□□□ -2.21
PER3P56645 MIR125B2-201ENST00000385128 89 ntBASIC1.22□□□□□ -2.21
PER3P56645 MIR618-201ENST00000385287 98 ntBASIC1.22□□□□□ -2.21
PER3P56645 MIR1257-201ENST00000408490 117 ntBASIC1.22□□□□□ -2.21
PER3P56645 RNU6ATAC41P-201ENST00000408600 126 ntBASIC1.22□□□□□ -2.21
PER3P56645 RNU6-994P-201ENST00000410507 111 ntBASIC1.22□□□□□ -2.21
PER3P56645 RPS29P28-201ENST00000446439 141 ntBASIC1.22□□□□□ -2.21
PER3P56645 U6.109-201ENST00000636749 87 ntBASIC1.22□□□□□ -2.21
PER3P56645 AL512310.12-203ENST00000640543 90 ntBASIC1.22□□□□□ -2.21
PER3P56645 MIR450A1-201ENST00000362262 91 ntBASIC1.21□□□□□ -2.22
PER3P56645 RNY3P2-201ENST00000362918 102 ntBASIC1.21□□□□□ -2.22
PER3P56645 RNU6-832P-201ENST00000363319 107 ntBASIC1.21□□□□□ -2.22
PER3P56645 RNU6-865P-201ENST00000364772 107 ntBASIC1.21□□□□□ -2.22
PER3P56645 RPS27-201ENST00000368567 350 ntAPPRIS P1 TSL 1 (best) BASIC1.21□□□□□ -2.22
PER3P56645 RNU6-147P-201ENST00000383983 107 ntBASIC1.21□□□□□ -2.22
PER3P56645 MIR1827-201ENST00000408549 66 ntBASIC1.21□□□□□ -2.22
PER3P56645 SNORA25.16-201ENST00000516741 121 ntBASIC1.21□□□□□ -2.22
PER3P56645 RNU6-1223P-201ENST00000517124 104 ntBASIC1.21□□□□□ -2.22
PER3P56645 RNU6-537P-201ENST00000517277 103 ntBASIC1.21□□□□□ -2.22
PER3P56645 MIR8066-201ENST00000617280 78 ntBASIC1.21□□□□□ -2.22
PER3P56645 ZGRF1-202ENST00000309071 3347 ntTSL 1 (best) BASIC1.2□□□□□ -2.22
PER3P56645 C9orf84-201ENST00000318737 4661 ntAPPRIS P3 TSL 1 (best) BASIC1.2□□□□□ -2.22
PER3P56645 Y_RNA.377-201ENST00000365644 108 ntBASIC1.2□□□□□ -2.22
PER3P56645 RNU6-939P-201ENST00000384634 107 ntBASIC1.2□□□□□ -2.22
PER3P56645 MIR1302-5-201ENST00000408164 150 ntBASIC1.2□□□□□ -2.22
PER3P56645 MIR4804-201ENST00000581683 73 ntBASIC1.2□□□□□ -2.22
PER3P56645 AL442128.1-201ENST00000615151 90 ntBASIC1.2□□□□□ -2.22
PER3P56645 AP001362.1-201ENST00000625165 124 ntBASIC1.2□□□□□ -2.22
PER3P56645 Y_RNA.119-201ENST00000363301 96 ntBASIC1.19□□□□□ -2.22
PER3P56645 SNORA25.8-201ENST00000364831 128 ntBASIC1.19□□□□□ -2.22
PER3P56645 SNORA51.5-201ENST00000384126 131 ntBASIC1.19□□□□□ -2.22
PER3P56645 MIR758-201ENST00000390227 88 ntBASIC1.19□□□□□ -2.22
PER3P56645 RNU6ATAC20P-201ENST00000408436 127 ntBASIC1.19□□□□□ -2.22
PER3P56645 RNU6ATAC33P-201ENST00000408647 126 ntBASIC1.19□□□□□ -2.22
PER3P56645 RNU4-83P-201ENST00000410863 133 ntBASIC1.19□□□□□ -2.22
PER3P56645 AC012668.1-201ENST00000457625 228 ntTSL 3 BASIC1.19□□□□□ -2.22
PER3P56645 RNU6-904P-201ENST00000516206 101 ntBASIC1.19□□□□□ -2.22
PER3P56645 AC022709.1-201ENST00000615967 87 ntBASIC1.19□□□□□ -2.22
PER3P56645 HIF1A-204ENST00000539097 3956 ntTSL 1 (best) BASIC1.18□□□□□ -2.22
PER3P56645 MIR1-1-201ENST00000362147 71 ntBASIC1.18□□□□□ -2.22
PER3P56645 Y_RNA.13-201ENST00000362403 112 ntBASIC1.18□□□□□ -2.22
PER3P56645 Y_RNA.36-201ENST00000362602 112 ntBASIC1.18□□□□□ -2.22
PER3P56645 Y_RNA.42-201ENST00000362660 108 ntBASIC1.18□□□□□ -2.22
PER3P56645 Y_RNA.78-201ENST00000362970 110 ntBASIC1.18□□□□□ -2.22
PER3P56645 RNU6-403P-201ENST00000363163 104 ntBASIC1.18□□□□□ -2.22
PER3P56645 RNU6-756P-201ENST00000383997 107 ntBASIC1.18□□□□□ -2.22
Retrieved 100 of 98,524 protein–RNA pairs in 105.5 ms