Protein–RNA interactions for Protein: P56524

HDAC4, Histone deacetylase 4, humanhuman

Predictions only

Length 1,084 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4P56524 AC087741.2-201ENST00000619415 172 ntBASIC0.83□□□□□ -2.28
HDAC4P56524 Y_RNA.42-201ENST00000362660 108 ntBASIC0.82□□□□□ -2.28
HDAC4P56524 MIR520H-201ENST00000385126 88 ntBASIC0.82□□□□□ -2.28
HDAC4P56524 TRAJ1-201ENST00000390536 62 ntAPPRIS P1 BASIC0.82□□□□□ -2.28
HDAC4P56524 RNU6-1307P-201ENST00000391012 103 ntBASIC0.82□□□□□ -2.28
HDAC4P56524 MIR938-201ENST00000401216 83 ntBASIC0.82□□□□□ -2.28
HDAC4P56524 SNORD93-201ENST00000408813 74 ntBASIC0.82□□□□□ -2.28
HDAC4P56524 AC244098.3-201ENST00000424803 96 ntBASIC0.82□□□□□ -2.28
HDAC4P56524 RNU7-102P-201ENST00000458948 62 ntBASIC0.82□□□□□ -2.28
HDAC4P56524 RNU6-772P-201ENST00000516042 105 ntBASIC0.82□□□□□ -2.28
HDAC4P56524 RNA5SP395-201ENST00000516567 118 ntBASIC0.82□□□□□ -2.28
HDAC4P56524 RNU7-156P-201ENST00000517214 74 ntBASIC0.82□□□□□ -2.28
HDAC4P56524 RNA5SP257-201ENST00000363023 116 ntBASIC0.81□□□□□ -2.28
HDAC4P56524 Y_RNA.198-201ENST00000364013 98 ntBASIC0.81□□□□□ -2.28
HDAC4P56524 Y_RNA.299-201ENST00000364973 94 ntBASIC0.81□□□□□ -2.28
HDAC4P56524 IL6ST-202ENST00000381286 201 ntTSL 1 (best) BASIC0.81□□□□□ -2.28
HDAC4P56524 Y_RNA.528-201ENST00000384575 108 ntBASIC0.81□□□□□ -2.28
HDAC4P56524 RNA5SP136-201ENST00000410906 107 ntBASIC0.81□□□□□ -2.28
HDAC4P56524 AC004941.2-201ENST00000427009 228 ntBASIC0.81□□□□□ -2.28
HDAC4P56524 RNA5SP330-201ENST00000517096 96 ntBASIC0.81□□□□□ -2.28
HDAC4P56524 MIR4714-201ENST00000580728 77 ntBASIC0.81□□□□□ -2.28
HDAC4P56524 AL109933.3-201ENST00000619095 188 ntBASIC0.81□□□□□ -2.28
HDAC4P56524 MIR539-201ENST00000365690 78 ntBASIC0.8□□□□□ -2.28
HDAC4P56524 RNU4-83P-201ENST00000410863 133 ntBASIC0.8□□□□□ -2.28
HDAC4P56524 Y_RNA.773-201ENST00000607168 90 ntBASIC0.8□□□□□ -2.28
HDAC4P56524 AC105081.1-201ENST00000617727 106 ntBASIC0.8□□□□□ -2.28
HDAC4P56524 MIR6866-201ENST00000638146 69 ntBASIC0.8□□□□□ -2.28
HDAC4P56524 Y_RNA.13-201ENST00000362403 112 ntBASIC0.79□□□□□ -2.28
HDAC4P56524 Y_RNA.71-201ENST00000362892 104 ntBASIC0.79□□□□□ -2.28
HDAC4P56524 RNU6-80P-201ENST00000384195 107 ntBASIC0.79□□□□□ -2.28
HDAC4P56524 RNU6-616P-201ENST00000384353 107 ntBASIC0.79□□□□□ -2.28
HDAC4P56524 MIR573-201ENST00000384964 99 ntBASIC0.79□□□□□ -2.28
HDAC4P56524 MIR936-201ENST00000401264 98 ntBASIC0.79□□□□□ -2.28
HDAC4P56524 AL606490.4-201ENST00000423117 127 ntBASIC0.79□□□□□ -2.28
HDAC4P56524 COX6CP6-201ENST00000490840 228 ntBASIC0.79□□□□□ -2.28
HDAC4P56524 RNU6-659P-201ENST00000516454 104 ntBASIC0.79□□□□□ -2.28
HDAC4P56524 RNU6-1061P-201ENST00000516530 99 ntBASIC0.79□□□□□ -2.28
HDAC4P56524 RNA5SP121-201ENST00000516537 101 ntBASIC0.79□□□□□ -2.28
HDAC4P56524 SNORA25.16-201ENST00000516741 121 ntBASIC0.79□□□□□ -2.28
HDAC4P56524 AC025166.1-201ENST00000612411 163 ntBASIC0.79□□□□□ -2.28
HDAC4P56524 OMD-201ENST00000375550 2449 ntAPPRIS P1 TSL 1 (best) BASIC0.78□□□□□ -2.28
HDAC4P56524 CCDC73-201ENST00000335185 3849 ntAPPRIS P2 TSL 2 BASIC0.78□□□□□ -2.28
HDAC4P56524 MTND5P18-201ENST00000445624 1801 ntBASIC0.78□□□□□ -2.28
HDAC4P56524 SNORD114-10-201ENST00000363409 72 ntBASIC0.78□□□□□ -2.28
HDAC4P56524 RNU6-81P-201ENST00000365608 104 ntBASIC0.78□□□□□ -2.28
HDAC4P56524 RNU6-364P-201ENST00000384387 107 ntBASIC0.78□□□□□ -2.28
HDAC4P56524 MIR206-201ENST00000384872 86 ntBASIC0.78□□□□□ -2.28
HDAC4P56524 RNU1-119P-201ENST00000391122 165 ntBASIC0.78□□□□□ -2.28
HDAC4P56524 AL603908.1-201ENST00000406098 201 ntBASIC0.78□□□□□ -2.28
HDAC4P56524 RNU7-6P-201ENST00000516845 62 ntBASIC0.78□□□□□ -2.28
HDAC4P56524 AC138749.4-201ENST00000563970 127 ntBASIC0.78□□□□□ -2.28
HDAC4P56524 AC133485.1-201ENST00000567176 124 ntBASIC0.78□□□□□ -2.28
HDAC4P56524 AC138907.6-201ENST00000568401 126 ntBASIC0.78□□□□□ -2.28
HDAC4P56524 AC090897.1-201ENST00000580909 226 ntBASIC0.78□□□□□ -2.28
HDAC4P56524 MIR8087-201ENST00000612745 78 ntBASIC0.78□□□□□ -2.28
HDAC4P56524 MIR6082-201ENST00000613604 109 ntBASIC0.78□□□□□ -2.28
HDAC4P56524 SNORD115-19-201ENST00000363098 82 ntBASIC0.77□□□□□ -2.29
HDAC4P56524 RNU6-403P-201ENST00000363163 104 ntBASIC0.77□□□□□ -2.29
HDAC4P56524 SNORD115-18-201ENST00000363293 82 ntBASIC0.77□□□□□ -2.29
HDAC4P56524 SNORD115-17-201ENST00000364612 82 ntBASIC0.77□□□□□ -2.29
HDAC4P56524 RNU6-1321P-201ENST00000390905 107 ntBASIC0.77□□□□□ -2.29
HDAC4P56524 RNU6-447P-201ENST00000410293 104 ntBASIC0.77□□□□□ -2.29
HDAC4P56524 RNU6-1118P-201ENST00000410382 104 ntBASIC0.77□□□□□ -2.29
HDAC4P56524 RNU6-1076P-201ENST00000410397 104 ntBASIC0.77□□□□□ -2.29
HDAC4P56524 RNU6-355P-201ENST00000410427 104 ntBASIC0.77□□□□□ -2.29
HDAC4P56524 RNU6-791P-201ENST00000410467 104 ntBASIC0.77□□□□□ -2.29
HDAC4P56524 RNU6-705P-201ENST00000410601 104 ntBASIC0.77□□□□□ -2.29
HDAC4P56524 RNU6-1100P-201ENST00000410691 104 ntBASIC0.77□□□□□ -2.29
HDAC4P56524 RNU6-860P-201ENST00000410860 104 ntBASIC0.77□□□□□ -2.29
HDAC4P56524 RNU6-1217P-201ENST00000411276 104 ntBASIC0.77□□□□□ -2.29
HDAC4P56524 RNU6-785P-201ENST00000411324 104 ntBASIC0.77□□□□□ -2.29
HDAC4P56524 Y_RNA.712-201ENST00000517011 92 ntBASIC0.77□□□□□ -2.29
HDAC4P56524 AC011195.1-201ENST00000578177 177 ntBASIC0.77□□□□□ -2.29
HDAC4P56524 U6.90-201ENST00000614007 104 ntBASIC0.77□□□□□ -2.29
HDAC4P56524 U6.70-201ENST00000620287 104 ntBASIC0.77□□□□□ -2.29
HDAC4P56524 RNU6-110P-201ENST00000384508 104 ntBASIC0.76□□□□□ -2.29
HDAC4P56524 RNU6-959P-201ENST00000384671 107 ntBASIC0.76□□□□□ -2.29
HDAC4P56524 RNU6ATAC31P-201ENST00000408513 126 ntBASIC0.76□□□□□ -2.29
HDAC4P56524 MIR3910-1-201ENST00000580936 111 ntBASIC0.76□□□□□ -2.29
HDAC4P56524 MIR3163-201ENST00000581592 73 ntBASIC0.76□□□□□ -2.29
HDAC4P56524 MIR3914-2-201ENST00000637339 95 ntBASIC0.76□□□□□ -2.29
HDAC4P56524 AL157777.2-201ENST00000258070 137 ntBASIC0.75□□□□□ -2.29
HDAC4P56524 MIR330-201ENST00000362196 94 ntBASIC0.75□□□□□ -2.29
HDAC4P56524 RNA5SP133-201ENST00000363368 119 ntBASIC0.75□□□□□ -2.29
HDAC4P56524 SNORD100-201ENST00000408573 76 ntBASIC0.75□□□□□ -2.29
HDAC4P56524 MIR1255B1-201ENST00000636325 63 ntBASIC0.75□□□□□ -2.29
HDAC4P56524 U6.109-201ENST00000636749 87 ntBASIC0.75□□□□□ -2.29
HDAC4P56524 RNA5SP62-201ENST00000363457 110 ntBASIC0.74□□□□□ -2.29
HDAC4P56524 Y_RNA.213-201ENST00000364178 111 ntBASIC0.74□□□□□ -2.29
HDAC4P56524 Y_RNA.258-201ENST00000364613 105 ntBASIC0.74□□□□□ -2.29
HDAC4P56524 SNORD116-14-201ENST00000383894 92 ntBASIC0.74□□□□□ -2.29
HDAC4P56524 SNORD116-17-201ENST00000383929 92 ntBASIC0.74□□□□□ -2.29
HDAC4P56524 RNY1P8-201ENST00000383970 114 ntBASIC0.74□□□□□ -2.29
HDAC4P56524 SNORD116-15-201ENST00000384445 92 ntBASIC0.74□□□□□ -2.29
HDAC4P56524 SNORD116-19-201ENST00000384729 92 ntBASIC0.74□□□□□ -2.29
HDAC4P56524 SNORD77B-201ENST00000391112 67 ntBASIC0.74□□□□□ -2.29
HDAC4P56524 TMSB4XP3-201ENST00000445144 114 ntBASIC0.74□□□□□ -2.29
HDAC4P56524 AC002350.1-201ENST00000490759 375 ntBASIC0.74□□□□□ -2.29
HDAC4P56524 RNU7-2P-201ENST00000516096 62 ntBASIC0.74□□□□□ -2.29
HDAC4P56524 RNU6-531P-201ENST00000516694 104 ntBASIC0.74□□□□□ -2.29
Retrieved 100 of 98,524 protein–RNA pairs in 262.7 ms