Protein–RNA interactions for Protein: P55283

CDH4, Cadherin-4, humanhuman

Predictions only

Length 916 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH4P55283 AC008737.2-201ENST00000599446 118 ntBASIC-0.15□□□□□ -2.43
CDH4P55283 Y_RNA.20-201ENST00000362479 113 ntBASIC-0.16□□□□□ -2.44
CDH4P55283 Y_RNA.65-201ENST00000362846 100 ntBASIC-0.16□□□□□ -2.44
CDH4P55283 Y_RNA.251-201ENST00000364551 99 ntBASIC-0.16□□□□□ -2.44
CDH4P55283 Y_RNA.521-201ENST00000384560 114 ntBASIC-0.16□□□□□ -2.44
CDH4P55283 RNU6-429P-201ENST00000384582 108 ntBASIC-0.16□□□□□ -2.44
CDH4P55283 MIR5706-201ENST00000579841 80 ntBASIC-0.16□□□□□ -2.44
CDH4P55283 MIR3149-201ENST00000584629 83 ntBASIC-0.16□□□□□ -2.44
CDH4P55283 MIR548AD-201ENST00000584780 82 ntBASIC-0.16□□□□□ -2.44
CDH4P55283 RNU6-302P-201ENST00000365249 107 ntBASIC-0.17□□□□□ -2.44
CDH4P55283 SNORD41.1-201ENST00000391000 69 ntBASIC-0.17□□□□□ -2.44
CDH4P55283 RNU6-918P-201ENST00000391219 106 ntBASIC-0.17□□□□□ -2.44
CDH4P55283 MIR892B-201ENST00000401279 77 ntBASIC-0.17□□□□□ -2.44
CDH4P55283 RNU7-104P-201ENST00000459398 79 ntBASIC-0.17□□□□□ -2.44
CDH4P55283 MIR548H5-201ENST00000580314 60 ntBASIC-0.17□□□□□ -2.44
CDH4P55283 AC011603.4-201ENST00000611325 277 ntBASIC-0.17□□□□□ -2.44
CDH4P55283 Y_RNA.149-201ENST00000363558 117 ntBASIC-0.18□□□□□ -2.44
CDH4P55283 SNORA32.1-201ENST00000364514 115 ntBASIC-0.18□□□□□ -2.44
CDH4P55283 Y_RNA.477-201ENST00000384352 108 ntBASIC-0.18□□□□□ -2.44
CDH4P55283 RNU6-738P-201ENST00000384531 106 ntBASIC-0.18□□□□□ -2.44
CDH4P55283 RNU6-1321P-201ENST00000390905 107 ntBASIC-0.18□□□□□ -2.44
CDH4P55283 RNU6-269P-201ENST00000391077 97 ntBASIC-0.18□□□□□ -2.44
CDH4P55283 RNU6-240P-201ENST00000516098 97 ntBASIC-0.18□□□□□ -2.44
CDH4P55283 Y_RNA.668-201ENST00000516233 93 ntBASIC-0.18□□□□□ -2.44
CDH4P55283 RNU2-60P-201ENST00000517290 128 ntBASIC-0.18□□□□□ -2.44
CDH4P55283 hsa-mir-3130-1.1-201ENST00000579223 75 ntBASIC-0.18□□□□□ -2.44
CDH4P55283 uc_338.28-201ENST00000612082 187 ntBASIC-0.18□□□□□ -2.44
CDH4P55283 RNU6-652P-201ENST00000365488 107 ntBASIC-0.19□□□□□ -2.44
CDH4P55283 Y_RNA.374-201ENST00000365606 101 ntBASIC-0.19□□□□□ -2.44
CDH4P55283 RNU6-449P-201ENST00000383914 107 ntBASIC-0.19□□□□□ -2.44
CDH4P55283 RNU6V-201ENST00000384105 107 ntBASIC-0.19□□□□□ -2.44
CDH4P55283 MIR548L-201ENST00000408303 86 ntBASIC-0.19□□□□□ -2.44
CDH4P55283 Y_RNA.793-201ENST00000411222 111 ntBASIC-0.19□□□□□ -2.44
CDH4P55283 TRAJ51-201ENST00000504127 63 ntBASIC-0.19□□□□□ -2.44
CDH4P55283 AC097716.1-201ENST00000509136 180 ntTSL 2 BASIC-0.19□□□□□ -2.44
CDH4P55283 RNU6ATAC22P-201ENST00000516794 89 ntBASIC-0.19□□□□□ -2.44
CDH4P55283 Y_RNA.812-201ENST00000610788 101 ntBASIC-0.19□□□□□ -2.44
CDH4P55283 Y_RNA.784-201ENST00000613803 101 ntBASIC-0.19□□□□□ -2.44
CDH4P55283 Y_RNA.787-201ENST00000616522 101 ntBASIC-0.19□□□□□ -2.44
CDH4P55283 Y_RNA.780-201ENST00000617336 101 ntBASIC-0.19□□□□□ -2.44
CDH4P55283 Y_RNA.801-201ENST00000619005 101 ntBASIC-0.19□□□□□ -2.44
CDH4P55283 RNU6-818P-201ENST00000364837 108 ntBASIC-0.2□□□□□ -2.44
CDH4P55283 Y_RNA.435-201ENST00000384095 112 ntBASIC-0.2□□□□□ -2.44
CDH4P55283 Y_RNA.459-201ENST00000384251 102 ntBASIC-0.2□□□□□ -2.44
CDH4P55283 Y_RNA.497-201ENST00000384447 98 ntBASIC-0.2□□□□□ -2.44
CDH4P55283 MIR568-201ENST00000385036 95 ntBASIC-0.2□□□□□ -2.44
CDH4P55283 RNU7-165P-201ENST00000458864 60 ntBASIC-0.2□□□□□ -2.44
CDH4P55283 RNU7-123P-201ENST00000515911 60 ntBASIC-0.2□□□□□ -2.44
CDH4P55283 Y_RNA.680-201ENST00000516441 93 ntBASIC-0.2□□□□□ -2.44
CDH4P55283 AC138907.4-201ENST00000570107 226 ntBASIC-0.2□□□□□ -2.44
CDH4P55283 MIR3925-201ENST00000584674 77 ntBASIC-0.2□□□□□ -2.44
CDH4P55283 AC021443.1-201ENST00000604478 211 ntBASIC-0.2□□□□□ -2.44
CDH4P55283 MIR206-201ENST00000384872 86 ntBASIC-0.21□□□□□ -2.44
CDH4P55283 MIR329-2-201ENST00000385029 84 ntBASIC-0.21□□□□□ -2.44
CDH4P55283 RNU6-1307P-201ENST00000391012 103 ntBASIC-0.21□□□□□ -2.44
CDH4P55283 RNU4-69P-201ENST00000410677 143 ntBASIC-0.21□□□□□ -2.44
CDH4P55283 RNU7-164P-201ENST00000459221 62 ntBASIC-0.21□□□□□ -2.44
CDH4P55283 RNU6-1265P-201ENST00000516342 103 ntBASIC-0.21□□□□□ -2.44
CDH4P55283 MIR4500-201ENST00000579472 76 ntBASIC-0.21□□□□□ -2.44
CDH4P55283 MIR4677-201ENST00000584153 80 ntBASIC-0.21□□□□□ -2.44
CDH4P55283 RNU7-10P-201ENST00000607194 63 ntBASIC-0.21□□□□□ -2.44
CDH4P55283 Clostridiales-1.4-201ENST00000636807 150 ntBASIC-0.21□□□□□ -2.44
CDH4P55283 Y_RNA.221-201ENST00000364248 96 ntBASIC-0.22□□□□□ -2.44
CDH4P55283 Y_RNA.350-201ENST00000365409 98 ntBASIC-0.22□□□□□ -2.44
CDH4P55283 Y_RNA.478-201ENST00000384358 107 ntBASIC-0.22□□□□□ -2.44
CDH4P55283 Y_RNA.556-201ENST00000384677 113 ntBASIC-0.22□□□□□ -2.44
CDH4P55283 MIR635-201ENST00000384830 98 ntBASIC-0.22□□□□□ -2.44
CDH4P55283 MIR599-201ENST00000385069 95 ntBASIC-0.22□□□□□ -2.44
CDH4P55283 SNORA75.5-201ENST00000391291 81 ntBASIC-0.22□□□□□ -2.44
CDH4P55283 MTCYBP9-201ENST00000431021 303 ntBASIC-0.22□□□□□ -2.44
CDH4P55283 RNU7-159P-201ENST00000459284 62 ntBASIC-0.22□□□□□ -2.44
CDH4P55283 RNU4-71P-201ENST00000516258 113 ntBASIC-0.22□□□□□ -2.44
CDH4P55283 RNA5SP285-201ENST00000516619 119 ntBASIC-0.22□□□□□ -2.44
CDH4P55283 IGHVII-40-1-201ENST00000517316 58 ntBASIC-0.22□□□□□ -2.44
CDH4P55283 MIR3128-201ENST00000581957 66 ntBASIC-0.22□□□□□ -2.44
CDH4P55283 U7.6-201ENST00000610841 64 ntBASIC-0.22□□□□□ -2.44
CDH4P55283 AC073869.9-201ENST00000641610 120 ntBASIC-0.22□□□□□ -2.44
CDH4P55283 RNU6-508P-201ENST00000363231 103 ntBASIC-0.23□□□□□ -2.45
CDH4P55283 Y_RNA.133-201ENST00000363428 110 ntBASIC-0.23□□□□□ -2.45
CDH4P55283 SNORA63-201ENST00000363450 132 ntBASIC-0.23□□□□□ -2.45
CDH4P55283 RNY1P11-201ENST00000363759 113 ntBASIC-0.23□□□□□ -2.45
CDH4P55283 Y_RNA.299-201ENST00000364973 94 ntBASIC-0.23□□□□□ -2.45
CDH4P55283 RNU6-47P-201ENST00000383866 107 ntBASIC-0.23□□□□□ -2.45
CDH4P55283 Y_RNA.448-201ENST00000384185 108 ntBASIC-0.23□□□□□ -2.45
CDH4P55283 RNU6ATAC11P-201ENST00000408541 125 ntBASIC-0.23□□□□□ -2.45
CDH4P55283 RNA5SP163-201ENST00000410304 99 ntBASIC-0.23□□□□□ -2.45
CDH4P55283 MTATP6P21-201ENST00000440681 189 ntBASIC-0.23□□□□□ -2.45
CDH4P55283 AC097635.1-201ENST00000450678 155 ntBASIC-0.23□□□□□ -2.45
CDH4P55283 RNU7-48P-201ENST00000458875 63 ntBASIC-0.23□□□□□ -2.45
CDH4P55283 Y_RNA.651-201ENST00000459380 103 ntBASIC-0.23□□□□□ -2.45
CDH4P55283 AC107027.2-201ENST00000512197 115 ntBASIC-0.23□□□□□ -2.45
CDH4P55283 Y_RNA.681-201ENST00000516445 113 ntBASIC-0.23□□□□□ -2.45
CDH4P55283 RNU6-180P-201ENST00000516697 61 ntBASIC-0.23□□□□□ -2.45
CDH4P55283 RNU6-312P-201ENST00000364629 107 ntBASIC-0.24□□□□□ -2.45
CDH4P55283 Y_RNA.298-201ENST00000364960 107 ntBASIC-0.24□□□□□ -2.45
CDH4P55283 MIR106A-201ENST00000384870 81 ntBASIC-0.24□□□□□ -2.45
CDH4P55283 RNU6-588P-201ENST00000410281 105 ntBASIC-0.24□□□□□ -2.45
CDH4P55283 RNU6-111P-201ENST00000517179 105 ntBASIC-0.24□□□□□ -2.45
CDH4P55283 EBAG9-207ENST00000531677 777 ntTSL 1 (best) BASIC-0.24□□□□□ -2.45
CDH4P55283 MIR1295B-201ENST00000636144 60 ntBASIC-0.24□□□□□ -2.45
Retrieved 100 of 98,524 protein–RNA pairs in 176.6 ms