Protein–RNA interactions for Protein: P52948

NUP98, Nuclear pore complex protein Nup98-Nup96, humanhuman

Predictions only

Length 1,817 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP98P52948 Y_RNA.88-201ENST00000363029 99 ntBASIC-1.42□□□□□ -2.64
NUP98P52948 RNY4P14-201ENST00000363656 96 ntBASIC-1.42□□□□□ -2.64
NUP98P52948 RNU6-540P-201ENST00000384622 101 ntBASIC-1.42□□□□□ -2.64
NUP98P52948 RNU6-576P-201ENST00000390854 102 ntBASIC-1.42□□□□□ -2.64
NUP98P52948 SNORD63B-201ENST00000411005 70 ntBASIC-1.42□□□□□ -2.64
NUP98P52948 AL365205.2-201ENST00000594586 68 ntBASIC-1.42□□□□□ -2.64
NUP98P52948 AC093783.1-201ENST00000612976 329 ntBASIC-1.42□□□□□ -2.64
NUP98P52948 AC138305.3-201ENST00000624988 240 ntBASIC-1.42□□□□□ -2.64
NUP98P52948 AL669831.3-213ENST00000636676 183 ntBASIC-1.42□□□□□ -2.64
NUP98P52948 Y_RNA.23-201ENST00000362496 106 ntBASIC-1.43□□□□□ -2.64
NUP98P52948 RNU6-1163P-201ENST00000364516 107 ntBASIC-1.43□□□□□ -2.64
NUP98P52948 Y_RNA.299-201ENST00000364973 94 ntBASIC-1.43□□□□□ -2.64
NUP98P52948 Y_RNA.542-201ENST00000384641 111 ntBASIC-1.43□□□□□ -2.64
NUP98P52948 MIR519A1-201ENST00000385257 85 ntBASIC-1.43□□□□□ -2.64
NUP98P52948 SNORA79-201ENST00000408376 140 ntBASIC-1.43□□□□□ -2.64
NUP98P52948 Y_RNA.809-201ENST00000516058 95 ntBASIC-1.43□□□□□ -2.64
NUP98P52948 RNU7-137P-201ENST00000516788 62 ntBASIC-1.43□□□□□ -2.64
NUP98P52948 SNORA40.17-201ENST00000517256 115 ntBASIC-1.43□□□□□ -2.64
NUP98P52948 MIR548AE1-201ENST00000583292 70 ntBASIC-1.43□□□□□ -2.64
NUP98P52948 Y_RNA.114-201ENST00000363265 113 ntBASIC-1.43□□□□□ -2.64
NUP98P52948 Y_RNA.190-201ENST00000363964 101 ntBASIC-1.43□□□□□ -2.64
NUP98P52948 RNU6-937P-201ENST00000384325 106 ntBASIC-1.43□□□□□ -2.64
NUP98P52948 MIR526A2-201ENST00000390198 65 ntBASIC-1.43□□□□□ -2.64
NUP98P52948 AC096644.2-201ENST00000429278 159 ntBASIC-1.43□□□□□ -2.64
NUP98P52948 AC006006.1-201ENST00000603082 144 ntBASIC-1.43□□□□□ -2.64
NUP98P52948 Y_RNA.9-201ENST00000362354 101 ntBASIC-1.44□□□□□ -2.64
NUP98P52948 Y_RNA.199-201ENST00000364014 102 ntBASIC-1.44□□□□□ -2.64
NUP98P52948 Y_RNA.204-201ENST00000364112 102 ntBASIC-1.44□□□□□ -2.64
NUP98P52948 SNORD115-35-201ENST00000365122 82 ntBASIC-1.44□□□□□ -2.64
NUP98P52948 Y_RNA.785-201ENST00000384290 109 ntBASIC-1.44□□□□□ -2.64
NUP98P52948 MIR889-201ENST00000401280 79 ntBASIC-1.44□□□□□ -2.64
NUP98P52948 MTATP6P19-201ENST00000413797 659 ntBASIC-1.44□□□□□ -2.64
NUP98P52948 AC133104.2-201ENST00000615272 193 ntBASIC-1.44□□□□□ -2.64
NUP98P52948 RNU4-10P-201ENST00000364383 140 ntBASIC-1.45□□□□□ -2.64
NUP98P52948 Y_RNA.346-201ENST00000365385 112 ntBASIC-1.45□□□□□ -2.64
NUP98P52948 RNY1P6-201ENST00000384193 109 ntBASIC-1.45□□□□□ -2.64
NUP98P52948 RNU7-134P-201ENST00000458997 64 ntBASIC-1.45□□□□□ -2.64
NUP98P52948 RNU6-287P-201ENST00000516230 98 ntBASIC-1.45□□□□□ -2.64
NUP98P52948 RNU6-191P-201ENST00000516295 94 ntBASIC-1.45□□□□□ -2.64
NUP98P52948 MIR216B-201ENST00000390186 82 ntBASIC-1.45□□□□□ -2.64
NUP98P52948 MTND4LP30-201ENST00000454092 297 ntBASIC-1.45□□□□□ -2.64
NUP98P52948 RNA5SP272-201ENST00000516095 111 ntBASIC-1.45□□□□□ -2.64
NUP98P52948 AL133368.2-201ENST00000556978 386 ntTSL 3 BASIC-1.45□□□□□ -2.64
NUP98P52948 MIR548AG2-201ENST00000581228 64 ntBASIC-1.45□□□□□ -2.64
NUP98P52948 AC078883.4-201ENST00000623218 367 ntBASIC-1.45□□□□□ -2.64
NUP98P52948 Y_RNA.89-201ENST00000363031 102 ntBASIC-1.46□□□□□ -2.64
NUP98P52948 Y_RNA.531-201ENST00000384589 121 ntBASIC-1.46□□□□□ -2.64
NUP98P52948 Y_RNA.599-201ENST00000410489 109 ntBASIC-1.46□□□□□ -2.64
NUP98P52948 ATP1B3-AS1-201ENST00000492725 376 ntTSL 5 BASIC-1.46□□□□□ -2.64
NUP98P52948 Y_RNA.352-201ENST00000365439 102 ntBASIC-1.47□□□□□ -2.64
NUP98P52948 Y_RNA.357-201ENST00000365487 109 ntBASIC-1.47□□□□□ -2.64
NUP98P52948 SNORA49-201ENST00000386157 136 ntBASIC-1.47□□□□□ -2.64
NUP98P52948 Y_RNA.646-201ENST00000410980 101 ntBASIC-1.47□□□□□ -2.64
NUP98P52948 MIR2113-201ENST00000459007 91 ntBASIC-1.47□□□□□ -2.64
NUP98P52948 RNU6-358P-201ENST00000516564 75 ntBASIC-1.47□□□□□ -2.64
NUP98P52948 RNU7-30P-201ENST00000516835 62 ntBASIC-1.47□□□□□ -2.64
NUP98P52948 AL359881.1-201ENST00000602916 267 ntBASIC-1.47□□□□□ -2.64
NUP98P52948 AC145423.2-201ENST00000610631 239 ntBASIC-1.47□□□□□ -2.64
NUP98P52948 snoR1.1-201ENST00000628177 80 ntBASIC-1.47□□□□□ -2.64
NUP98P52948 Y_RNA.225-201ENST00000364326 97 ntBASIC-1.47□□□□□ -2.65
NUP98P52948 Y_RNA.244-201ENST00000364484 109 ntBASIC-1.47□□□□□ -2.65
NUP98P52948 Y_RNA.418-201ENST00000384029 102 ntBASIC-1.47□□□□□ -2.65
NUP98P52948 Y_RNA.596-201ENST00000410462 109 ntBASIC-1.47□□□□□ -2.65
NUP98P52948 Y_RNA.653-201ENST00000459091 95 ntBASIC-1.47□□□□□ -2.65
NUP98P52948 RNU6-415P-201ENST00000516252 97 ntBASIC-1.47□□□□□ -2.65
NUP98P52948 PART1_1.1-201ENST00000611761 217 ntBASIC-1.47□□□□□ -2.65
NUP98P52948 RNU4-90P-201ENST00000362773 141 ntBASIC-1.48□□□□□ -2.65
NUP98P52948 RNU6-728P-201ENST00000365375 104 ntBASIC-1.48□□□□□ -2.65
NUP98P52948 RNU6-524P-201ENST00000384270 107 ntBASIC-1.48□□□□□ -2.65
NUP98P52948 RNU6-476P-201ENST00000384726 107 ntBASIC-1.48□□□□□ -2.65
NUP98P52948 Y_RNA.691-201ENST00000516611 103 ntBASIC-1.48□□□□□ -2.65
NUP98P52948 RNU6-1213P-201ENST00000517075 94 ntBASIC-1.48□□□□□ -2.65
NUP98P52948 RNU6-699P-201ENST00000517081 110 ntBASIC-1.48□□□□□ -2.65
NUP98P52948 AC009779.6-201ENST00000603972 165 ntBASIC-1.48□□□□□ -2.65
NUP98P52948 MIR652-201ENST00000385278 98 ntBASIC-1.49□□□□□ -2.65
NUP98P52948 AC245505.1-201ENST00000556398 224 ntBASIC-1.49□□□□□ -2.65
NUP98P52948 AL138825.1-201ENST00000618587 192 ntBASIC-1.49□□□□□ -2.65
NUP98P52948 MIR6818-201ENST00000621576 65 ntBASIC-1.49□□□□□ -2.65
NUP98P52948 MIR376A2-201ENST00000636782 80 ntBASIC-1.49□□□□□ -2.65
NUP98P52948 RNU6-1125P-201ENST00000363601 107 ntBASIC-1.5□□□□□ -2.65
NUP98P52948 MIR206-201ENST00000384872 86 ntBASIC-1.5□□□□□ -2.65
NUP98P52948 RNA5SP144-201ENST00000410846 116 ntBASIC-1.5□□□□□ -2.65
NUP98P52948 AL353813.1-201ENST00000440700 253 ntBASIC-1.5□□□□□ -2.65
NUP98P52948 AL731563.1-201ENST00000442202 214 ntBASIC-1.5□□□□□ -2.65
NUP98P52948 SCARNA17.3-201ENST00000516381 125 ntBASIC-1.5□□□□□ -2.65
NUP98P52948 RNU6-1247P-201ENST00000516622 98 ntBASIC-1.5□□□□□ -2.65
NUP98P52948 SNORD114-4-201ENST00000363962 75 ntBASIC-1.5□□□□□ -2.65
NUP98P52948 Y_RNA.223-201ENST00000364290 113 ntBASIC-1.5□□□□□ -2.65
NUP98P52948 Y_RNA.526-201ENST00000384572 110 ntBASIC-1.5□□□□□ -2.65
NUP98P52948 MIR124-2-201ENST00000385081 109 ntBASIC-1.5□□□□□ -2.65
NUP98P52948 RNU7-106P-201ENST00000459514 67 ntBASIC-1.5□□□□□ -2.65
NUP98P52948 SNORA40.14-201ENST00000516543 86 ntBASIC-1.5□□□□□ -2.65
NUP98P52948 MIR6502-201ENST00000617296 76 ntBASIC-1.5□□□□□ -2.65
NUP98P52948 MIR335-201ENST00000362173 94 ntBASIC-1.51□□□□□ -2.65
NUP98P52948 Y_RNA.214-201ENST00000364201 112 ntBASIC-1.51□□□□□ -2.65
NUP98P52948 MIR4308-201ENST00000580634 81 ntBASIC-1.51□□□□□ -2.65
NUP98P52948 RPS29P30-201ENST00000600975 111 ntBASIC-1.51□□□□□ -2.65
NUP98P52948 Y_RNA.24-201ENST00000362508 103 ntBASIC-1.52□□□□□ -2.65
NUP98P52948 RNU6-170P-201ENST00000362832 104 ntBASIC-1.52□□□□□ -2.65
NUP98P52948 RNU6-1233P-201ENST00000362922 102 ntBASIC-1.52□□□□□ -2.65
Retrieved 100 of 98,524 protein–RNA pairs in 178.4 ms