Protein–RNA interactions for Protein: P52797

EFNA3, Ephrin-A3, humanhuman

Predictions only

Length 238 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EFNA3P52797 RNU4-58P-201ENST00000363192 141 ntBASIC0.37□□□□□ -2.35
EFNA3P52797 SNORD114-10-201ENST00000363409 72 ntBASIC0.37□□□□□ -2.35
EFNA3P52797 Y_RNA.174-201ENST00000363781 105 ntBASIC0.37□□□□□ -2.35
EFNA3P52797 Y_RNA.398-201ENST00000383952 99 ntBASIC0.37□□□□□ -2.35
EFNA3P52797 Y_RNA.400-201ENST00000383963 111 ntBASIC0.37□□□□□ -2.35
EFNA3P52797 SNORA50A-201ENST00000384225 134 ntBASIC0.37□□□□□ -2.35
EFNA3P52797 ATP6V0E1P1-201ENST00000412537 226 ntBASIC0.37□□□□□ -2.35
EFNA3P52797 RNU7-197P-201ENST00000458836 62 ntBASIC0.37□□□□□ -2.35
EFNA3P52797 NEAT1_2.1-201ENST00000620525 105 ntBASIC0.37□□□□□ -2.35
EFNA3P52797 AC092634.7-201ENST00000621022 103 ntBASIC0.37□□□□□ -2.35
EFNA3P52797 MIR924-201ENST00000638017 53 ntBASIC0.37□□□□□ -2.35
EFNA3P52797 RNU6-508P-201ENST00000363231 103 ntBASIC0.36□□□□□ -2.35
EFNA3P52797 RNA5SP133-201ENST00000363368 119 ntBASIC0.36□□□□□ -2.35
EFNA3P52797 VTRNA1-3-201ENST00000365645 89 ntBASIC0.36□□□□□ -2.35
EFNA3P52797 Y_RNA.555-201ENST00000384673 110 ntBASIC0.36□□□□□ -2.35
EFNA3P52797 PCNPP3-201ENST00000393579 471 ntBASIC0.36□□□□□ -2.35
EFNA3P52797 Y_RNA.617-201ENST00000410920 90 ntBASIC0.36□□□□□ -2.35
EFNA3P52797 LINC00345-201ENST00000443679 285 ntTSL 5 BASIC0.36□□□□□ -2.35
EFNA3P52797 SNORD67.1-201ENST00000516618 108 ntBASIC0.36□□□□□ -2.35
EFNA3P52797 SNORA25.16-201ENST00000516741 121 ntBASIC0.36□□□□□ -2.35
EFNA3P52797 RNU6-135P-201ENST00000516769 101 ntBASIC0.36□□□□□ -2.35
EFNA3P52797 U6.109-201ENST00000636749 87 ntBASIC0.36□□□□□ -2.35
EFNA3P52797 MIR101-2-201ENST00000362195 79 ntBASIC0.35□□□□□ -2.35
EFNA3P52797 SNORD18A-201ENST00000363753 72 ntBASIC0.35□□□□□ -2.35
EFNA3P52797 Y_RNA.215-201ENST00000364204 112 ntBASIC0.35□□□□□ -2.35
EFNA3P52797 Y_RNA.536-201ENST00000384621 113 ntBASIC0.35□□□□□ -2.35
EFNA3P52797 RNU6-535P-201ENST00000384722 107 ntBASIC0.35□□□□□ -2.35
EFNA3P52797 MIR759-201ENST00000390224 91 ntBASIC0.35□□□□□ -2.35
EFNA3P52797 SNORD71-201ENST00000411292 86 ntBASIC0.35□□□□□ -2.35
EFNA3P52797 AC096949.1-201ENST00000412047 152 ntBASIC0.35□□□□□ -2.35
EFNA3P52797 AC103879.1-201ENST00000503093 255 ntTSL 2 BASIC0.35□□□□□ -2.35
EFNA3P52797 RNU6-1194P-201ENST00000516208 104 ntBASIC0.35□□□□□ -2.35
EFNA3P52797 RNY4P20-201ENST00000516678 93 ntBASIC0.35□□□□□ -2.35
EFNA3P52797 RNU7-137P-201ENST00000516788 62 ntBASIC0.35□□□□□ -2.35
EFNA3P52797 MIR3678-201ENST00000578455 94 ntBASIC0.35□□□□□ -2.35
EFNA3P52797 MIR3121-201ENST00000579680 77 ntBASIC0.35□□□□□ -2.35
EFNA3P52797 AP001340.1-201ENST00000624405 217 ntBASIC0.35□□□□□ -2.35
EFNA3P52797 RNU6-647P-201ENST00000364243 107 ntBASIC0.34□□□□□ -2.36
EFNA3P52797 Y_RNA.420-201ENST00000384043 110 ntBASIC0.34□□□□□ -2.36
EFNA3P52797 Y_RNA.488-201ENST00000384403 102 ntBASIC0.34□□□□□ -2.36
EFNA3P52797 RNA5SP330-201ENST00000517096 96 ntBASIC0.34□□□□□ -2.36
EFNA3P52797 MIR3668-201ENST00000582138 75 ntBASIC0.34□□□□□ -2.36
EFNA3P52797 FAM13A-AS1_1.1-201ENST00000612555 119 ntBASIC0.34□□□□□ -2.36
EFNA3P52797 G3BP1-214ENST00000627077 114 ntTSL 5 BASIC0.34□□□□□ -2.36
EFNA3P52797 Y_RNA.114-201ENST00000363265 113 ntBASIC0.33□□□□□ -2.36
EFNA3P52797 Y_RNA.115-201ENST00000363272 98 ntBASIC0.33□□□□□ -2.36
EFNA3P52797 RNU6-1229P-201ENST00000364295 107 ntBASIC0.33□□□□□ -2.36
EFNA3P52797 Y_RNA.258-201ENST00000364613 105 ntBASIC0.33□□□□□ -2.36
EFNA3P52797 RNU6-716P-201ENST00000365621 103 ntBASIC0.33□□□□□ -2.36
EFNA3P52797 Y_RNA.567-201ENST00000384736 106 ntBASIC0.33□□□□□ -2.36
EFNA3P52797 RNU6-531P-201ENST00000516694 104 ntBASIC0.33□□□□□ -2.36
EFNA3P52797 RNA5SP94-201ENST00000516917 108 ntBASIC0.33□□□□□ -2.36
EFNA3P52797 AC108081.1-201ENST00000604358 221 ntBASIC0.33□□□□□ -2.36
EFNA3P52797 U7.2-201ENST00000607576 63 ntBASIC0.33□□□□□ -2.36
EFNA3P52797 MIR8087-201ENST00000612745 78 ntBASIC0.33□□□□□ -2.36
EFNA3P52797 AC105081.1-201ENST00000617727 106 ntBASIC0.33□□□□□ -2.36
EFNA3P52797 CEP290-203ENST00000547691 5968 ntTSL 1 (best) BASIC0.32□□□□□ -2.36
EFNA3P52797 Y_RNA.32-201ENST00000362589 110 ntBASIC0.32□□□□□ -2.36
EFNA3P52797 Y_RNA.119-201ENST00000363301 96 ntBASIC0.32□□□□□ -2.36
EFNA3P52797 Y_RNA.180-201ENST00000363867 113 ntBASIC0.32□□□□□ -2.36
EFNA3P52797 RNY1P2-201ENST00000364820 117 ntBASIC0.32□□□□□ -2.36
EFNA3P52797 Y_RNA.464-201ENST00000384282 110 ntBASIC0.32□□□□□ -2.36
EFNA3P52797 MIR644A-201ENST00000385262 94 ntBASIC0.32□□□□□ -2.36
EFNA3P52797 MIRLET7F2-201ENST00000385277 83 ntBASIC0.32□□□□□ -2.36
EFNA3P52797 SNORA40.8-201ENST00000411034 126 ntBASIC0.32□□□□□ -2.36
EFNA3P52797 SNORA62.5-201ENST00000516634 120 ntBASIC0.32□□□□□ -2.36
EFNA3P52797 SNORA31.14-201ENST00000516728 116 ntBASIC0.32□□□□□ -2.36
EFNA3P52797 MTND5P41-201ENST00000517498 206 ntBASIC0.32□□□□□ -2.36
EFNA3P52797 AC022523.2-201ENST00000561045 150 ntBASIC0.32□□□□□ -2.36
EFNA3P52797 MTND5P34-201ENST00000568888 325 ntBASIC0.32□□□□□ -2.36
EFNA3P52797 AL359881.1-201ENST00000602916 267 ntBASIC0.32□□□□□ -2.36
EFNA3P52797 AC021753.1-201ENST00000635724 168 ntBASIC0.32□□□□□ -2.36
EFNA3P52797 C9orf84-203ENST00000374287 4721 ntAPPRIS P3 TSL 5 BASIC0.32□□□□□ -2.36
EFNA3P52797 MIRLET7D-201ENST00000362263 87 ntBASIC0.31□□□□□ -2.36
EFNA3P52797 Y_RNA.98-201ENST00000363109 102 ntBASIC0.31□□□□□ -2.36
EFNA3P52797 Y_RNA.213-201ENST00000364178 111 ntBASIC0.31□□□□□ -2.36
EFNA3P52797 RNA5SP517-201ENST00000364724 117 ntBASIC0.31□□□□□ -2.36
EFNA3P52797 Y_RNA.343-201ENST00000365354 112 ntBASIC0.31□□□□□ -2.36
EFNA3P52797 RNU6-291P-201ENST00000384720 107 ntBASIC0.31□□□□□ -2.36
EFNA3P52797 MIR569-201ENST00000385228 96 ntBASIC0.31□□□□□ -2.36
EFNA3P52797 TRAJ1-201ENST00000390536 62 ntAPPRIS P1 BASIC0.31□□□□□ -2.36
EFNA3P52797 AC138749.4-201ENST00000563970 127 ntBASIC0.31□□□□□ -2.36
EFNA3P52797 MIR4514-201ENST00000581410 57 ntBASIC0.31□□□□□ -2.36
EFNA3P52797 SNORA25.18-201ENST00000607153 114 ntBASIC0.31□□□□□ -2.36
EFNA3P52797 MIR330-201ENST00000362196 94 ntBASIC0.3□□□□□ -2.36
EFNA3P52797 RNA5SP457-201ENST00000363657 124 ntBASIC0.3□□□□□ -2.36
EFNA3P52797 Y_RNA.448-201ENST00000384185 108 ntBASIC0.3□□□□□ -2.36
EFNA3P52797 RNU6-429P-201ENST00000384582 108 ntBASIC0.3□□□□□ -2.36
EFNA3P52797 MIR1197-201ENST00000408818 88 ntBASIC0.3□□□□□ -2.36
EFNA3P52797 RNA5SP136-201ENST00000410906 107 ntBASIC0.3□□□□□ -2.36
EFNA3P52797 RN7SKP19-201ENST00000516016 252 ntBASIC0.3□□□□□ -2.36
EFNA3P52797 RNU7-6P-201ENST00000516845 62 ntBASIC0.3□□□□□ -2.36
EFNA3P52797 MIR3163-201ENST00000581592 73 ntBASIC0.3□□□□□ -2.36
EFNA3P52797 RNU7-10P-201ENST00000607194 63 ntBASIC0.3□□□□□ -2.36
EFNA3P52797 TUG1_4.1-201ENST00000619464 181 ntBASIC0.3□□□□□ -2.36
EFNA3P52797 VPS35-212ENST00000640313 141 ntTSL 5 BASIC0.3□□□□□ -2.36
EFNA3P52797 MIR103A1-201ENST00000362165 78 ntBASIC0.29□□□□□ -2.36
EFNA3P52797 Y_RNA.56-201ENST00000362798 112 ntBASIC0.29□□□□□ -2.36
EFNA3P52797 Y_RNA.170-201ENST00000363746 110 ntBASIC0.29□□□□□ -2.36
EFNA3P52797 RNU6-865P-201ENST00000364772 107 ntBASIC0.29□□□□□ -2.36
Retrieved 100 of 98,524 protein–RNA pairs in 196 ms