Protein–RNA interactions for Protein: P48431

SOX2, Transcription factor SOX-2, humanhuman

Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2P48431 MIR938-201ENST00000401216 83 ntBASIC0.99□□□□□ -2.25
SOX2P48431 RNU6ATAC41P-201ENST00000408600 126 ntBASIC0.99□□□□□ -2.25
SOX2P48431 AC096949.1-201ENST00000412047 152 ntBASIC0.99□□□□□ -2.25
SOX2P48431 RNU7-95P-201ENST00000459222 64 ntBASIC0.99□□□□□ -2.25
SOX2P48431 U7.7-201ENST00000459276 60 ntBASIC0.99□□□□□ -2.25
SOX2P48431 RNU6-1110P-201ENST00000516462 101 ntBASIC0.99□□□□□ -2.25
SOX2P48431 RNU6-589P-201ENST00000516485 107 ntBASIC0.99□□□□□ -2.25
SOX2P48431 MIR4491-201ENST00000581087 68 ntBASIC0.99□□□□□ -2.25
SOX2P48431 UHRF1BP1L-203ENST00000545232 4088 ntTSL 1 (best) BASIC0.98□□□□□ -2.25
SOX2P48431 ZNF654-201ENST00000309495 4957 ntAPPRIS P2 TSL 1 (best) BASIC0.98□□□□□ -2.25
SOX2P48431 RNU6-369P-201ENST00000362515 102 ntBASIC0.98□□□□□ -2.25
SOX2P48431 RNY1P2-201ENST00000364820 117 ntBASIC0.98□□□□□ -2.25
SOX2P48431 U8.6-201ENST00000364939 135 ntBASIC0.98□□□□□ -2.25
SOX2P48431 Y_RNA.328-201ENST00000365208 113 ntBASIC0.98□□□□□ -2.25
SOX2P48431 RNU6-53P-201ENST00000365367 106 ntBASIC0.98□□□□□ -2.25
SOX2P48431 RNU6-364P-201ENST00000384387 107 ntBASIC0.98□□□□□ -2.25
SOX2P48431 SNORD89-201ENST00000390981 114 ntBASIC0.98□□□□□ -2.25
SOX2P48431 RNU6-733P-201ENST00000410759 104 ntBASIC0.98□□□□□ -2.25
SOX2P48431 snoU13.18-201ENST00000459483 104 ntBASIC0.98□□□□□ -2.25
SOX2P48431 Y_RNA.709-201ENST00000516952 92 ntBASIC0.98□□□□□ -2.25
SOX2P48431 RNU7-156P-201ENST00000517214 74 ntBASIC0.98□□□□□ -2.25
SOX2P48431 MIR5009-201ENST00000578736 100 ntBASIC0.98□□□□□ -2.25
SOX2P48431 MIR4804-201ENST00000581683 73 ntBASIC0.98□□□□□ -2.25
SOX2P48431 AC032019.2-201ENST00000584916 403 ntTSL 5 BASIC0.98□□□□□ -2.25
SOX2P48431 U6.109-201ENST00000636749 87 ntBASIC0.98□□□□□ -2.25
SOX2P48431 RNA5SP133-201ENST00000363368 119 ntBASIC0.97□□□□□ -2.25
SOX2P48431 SNORA7.1-201ENST00000363750 139 ntBASIC0.97□□□□□ -2.25
SOX2P48431 RNU6-1107P-201ENST00000364817 104 ntBASIC0.97□□□□□ -2.25
SOX2P48431 RNU6-215P-201ENST00000365169 102 ntBASIC0.97□□□□□ -2.25
SOX2P48431 SNORA72.6-201ENST00000384520 129 ntBASIC0.97□□□□□ -2.25
SOX2P48431 SNORD20-201ENST00000384550 80 ntBASIC0.97□□□□□ -2.25
SOX2P48431 RNU6-1307P-201ENST00000391012 103 ntBASIC0.97□□□□□ -2.25
SOX2P48431 Y_RNA.588-201ENST00000391254 102 ntBASIC0.97□□□□□ -2.25
SOX2P48431 AP1B1P2-201ENST00000416196 106 ntBASIC0.97□□□□□ -2.25
SOX2P48431 DEFB131E-201ENST00000532329 154 ntBASIC0.97□□□□□ -2.25
SOX2P48431 AC138749.4-201ENST00000563970 127 ntBASIC0.97□□□□□ -2.25
SOX2P48431 AP001362.1-201ENST00000625165 124 ntBASIC0.97□□□□□ -2.25
SOX2P48431 AL512310.12-203ENST00000640543 90 ntBASIC0.97□□□□□ -2.25
SOX2P48431 Y_RNA.323-201ENST00000365157 109 ntBASIC0.96□□□□□ -2.26
SOX2P48431 RPS27-201ENST00000368567 350 ntAPPRIS P1 TSL 1 (best) BASIC0.96□□□□□ -2.26
SOX2P48431 MIR520F-201ENST00000384824 87 ntBASIC0.96□□□□□ -2.26
SOX2P48431 RNU6-1018P-201ENST00000516577 106 ntBASIC0.96□□□□□ -2.26
SOX2P48431 RNU6-919P-201ENST00000516731 104 ntBASIC0.96□□□□□ -2.26
SOX2P48431 AL157834.3-201ENST00000615543 103 ntBASIC0.96□□□□□ -2.26
SOX2P48431 MIR8070-201ENST00000616510 88 ntBASIC0.96□□□□□ -2.26
SOX2P48431 C9orf84-204ENST00000394777 4955 ntAPPRIS ALT2 TSL 1 (best) BASIC0.96□□□□□ -2.26
SOX2P48431 DENND4A-209ENST00000635620 5887 ntTSL 5 BASIC0.95□□□□□ -2.26
SOX2P48431 Y_RNA.116-201ENST00000363292 103 ntBASIC0.95□□□□□ -2.26
SOX2P48431 Y_RNA.224-201ENST00000364308 111 ntBASIC0.95□□□□□ -2.26
SOX2P48431 Y_RNA.327-201ENST00000365201 102 ntBASIC0.95□□□□□ -2.26
SOX2P48431 RNU6-1014P-201ENST00000383940 103 ntBASIC0.95□□□□□ -2.26
SOX2P48431 TRAJ1-201ENST00000390536 62 ntAPPRIS P1 BASIC0.95□□□□□ -2.26
SOX2P48431 RNU6-679P-201ENST00000391003 106 ntBASIC0.95□□□□□ -2.26
SOX2P48431 RNU1-119P-201ENST00000391122 165 ntBASIC0.95□□□□□ -2.26
SOX2P48431 RNU7-56P-201ENST00000458744 62 ntBASIC0.95□□□□□ -2.26
SOX2P48431 PDCD5P2-201ENST00000507570 312 ntBASIC0.95□□□□□ -2.26
SOX2P48431 SNORD92-201ENST00000585078 85 ntBASIC0.95□□□□□ -2.26
SOX2P48431 MIR6078-201ENST00000611069 100 ntBASIC0.95□□□□□ -2.26
SOX2P48431 ZFAT-AS1_2.1-201ENST00000613742 201 ntBASIC0.95□□□□□ -2.26
SOX2P48431 MIR376B-201ENST00000614515 100 ntBASIC0.95□□□□□ -2.26
SOX2P48431 OMD-201ENST00000375550 2449 ntAPPRIS P1 TSL 1 (best) BASIC0.95□□□□□ -2.26
SOX2P48431 ANGPTL3-201ENST00000371129 2805 ntAPPRIS P1 TSL 1 (best) BASIC0.94□□□□□ -2.26
SOX2P48431 ZNF518A-210ENST00000624776 7994 ntAPPRIS P1 TSL 1 (best) BASIC0.94□□□□□ -2.26
SOX2P48431 Y_RNA.13-201ENST00000362403 112 ntBASIC0.94□□□□□ -2.26
SOX2P48431 RNU6-1313P-201ENST00000362622 102 ntBASIC0.94□□□□□ -2.26
SOX2P48431 RNU4-58P-201ENST00000363192 141 ntBASIC0.94□□□□□ -2.26
SOX2P48431 Y_RNA.119-201ENST00000363301 96 ntBASIC0.94□□□□□ -2.26
SOX2P48431 Y_RNA.360-201ENST00000365512 102 ntBASIC0.94□□□□□ -2.26
SOX2P48431 SNORA22-201ENST00000383907 134 ntBASIC0.94□□□□□ -2.26
SOX2P48431 MIR34C-201ENST00000384831 77 ntBASIC0.94□□□□□ -2.26
SOX2P48431 MIR605-201ENST00000385078 83 ntBASIC0.94□□□□□ -2.26
SOX2P48431 RNU7-102P-201ENST00000458948 62 ntBASIC0.94□□□□□ -2.26
SOX2P48431 SNORA25.16-201ENST00000516741 121 ntBASIC0.94□□□□□ -2.26
SOX2P48431 AC025627.3-201ENST00000582078 182 ntBASIC0.94□□□□□ -2.26
SOX2P48431 AL078603.1-201ENST00000603824 313 ntBASIC0.94□□□□□ -2.26
SOX2P48431 MIR6082-201ENST00000613604 109 ntBASIC0.94□□□□□ -2.26
SOX2P48431 RMST_2.1-201ENST00000617263 136 ntBASIC0.94□□□□□ -2.26
SOX2P48431 AL353770.2-201ENST00000620024 78 ntBASIC0.94□□□□□ -2.26
SOX2P48431 SNORD38.2-201ENST00000384470 69 ntBASIC0.93□□□□□ -2.26
SOX2P48431 SNORD105-201ENST00000386910 85 ntBASIC0.93□□□□□ -2.26
SOX2P48431 RNY4P18-201ENST00000391107 89 ntBASIC0.93□□□□□ -2.26
SOX2P48431 ATP6V0E1P1-201ENST00000412537 226 ntBASIC0.93□□□□□ -2.26
SOX2P48431 RNA5SP255-201ENST00000516370 107 ntBASIC0.93□□□□□ -2.26
SOX2P48431 RNU6-765P-201ENST00000516916 99 ntBASIC0.93□□□□□ -2.26
SOX2P48431 MIR4694-201ENST00000578534 80 ntBASIC0.93□□□□□ -2.26
SOX2P48431 MIR8066-201ENST00000617280 78 ntBASIC0.93□□□□□ -2.26
SOX2P48431 MIR7111-201ENST00000619751 72 ntBASIC0.93□□□□□ -2.26
SOX2P48431 Y_RNA.42-201ENST00000362660 108 ntBASIC0.92□□□□□ -2.26
SOX2P48431 MIR520H-201ENST00000385126 88 ntBASIC0.92□□□□□ -2.26
SOX2P48431 MIR1302-5-201ENST00000408164 150 ntBASIC0.92□□□□□ -2.26
SOX2P48431 AL035461.1-201ENST00000421490 332 ntBASIC0.92□□□□□ -2.26
SOX2P48431 AL353813.1-201ENST00000440700 253 ntBASIC0.92□□□□□ -2.26
SOX2P48431 NMTRQ-TTG12-1-201ENST00000467595 72 ntBASIC0.92□□□□□ -2.26
SOX2P48431 AC092892.1-201ENST00000496067 327 ntTSL 5 BASIC0.92□□□□□ -2.26
SOX2P48431 RNU6-1194P-201ENST00000516208 104 ntBASIC0.92□□□□□ -2.26
SOX2P48431 RNU6-531P-201ENST00000516694 104 ntBASIC0.92□□□□□ -2.26
SOX2P48431 SNORD114-21-201ENST00000606412 72 ntBASIC0.92□□□□□ -2.26
SOX2P48431 RNU6-392P-201ENST00000364926 101 ntBASIC0.91□□□□□ -2.26
SOX2P48431 RNU6-42P-201ENST00000384165 107 ntBASIC0.91□□□□□ -2.26
SOX2P48431 RNU6-1201P-201ENST00000384227 107 ntBASIC0.91□□□□□ -2.26
Retrieved 100 of 98,524 protein–RNA pairs in 122.4 ms