Protein–RNA interactions for Protein: P46934

NEDD4, E3 ubiquitin-protein ligase NEDD4, humanhuman

Predictions only

Length 1,319 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4P46934 Y_RNA.30-201ENST00000362572 97 ntBASIC0.39□□□□□ -2.35
NEDD4P46934 Y_RNA.536-201ENST00000384621 113 ntBASIC0.39□□□□□ -2.35
NEDD4P46934 Y_RNA.617-201ENST00000410920 90 ntBASIC0.39□□□□□ -2.35
NEDD4P46934 RNU7-123P-201ENST00000515911 60 ntBASIC0.39□□□□□ -2.35
NEDD4P46934 SNORA25.16-201ENST00000516741 121 ntBASIC0.39□□□□□ -2.35
NEDD4P46934 RNU7-137P-201ENST00000516788 62 ntBASIC0.39□□□□□ -2.35
NEDD4P46934 RNA5SP94-201ENST00000516917 108 ntBASIC0.39□□□□□ -2.35
NEDD4P46934 DEFB131E-201ENST00000532329 154 ntBASIC0.39□□□□□ -2.35
NEDD4P46934 MIR3144-201ENST00000579460 79 ntBASIC0.39□□□□□ -2.35
NEDD4P46934 MIR3121-201ENST00000579680 77 ntBASIC0.39□□□□□ -2.35
NEDD4P46934 AC098479.1-201ENST00000609225 154 ntBASIC0.39□□□□□ -2.35
NEDD4P46934 AP001340.1-201ENST00000624405 217 ntBASIC0.39□□□□□ -2.35
NEDD4P46934 AC108866.1-201ENST00000503073 2339 ntTSL 5 BASIC0.39□□□□□ -2.35
NEDD4P46934 SNORD18A-201ENST00000363753 72 ntBASIC0.38□□□□□ -2.35
NEDD4P46934 RNU6-1130P-201ENST00000365434 107 ntBASIC0.38□□□□□ -2.35
NEDD4P46934 Y_RNA.366-201ENST00000365540 102 ntBASIC0.38□□□□□ -2.35
NEDD4P46934 RNU6-716P-201ENST00000365621 103 ntBASIC0.38□□□□□ -2.35
NEDD4P46934 SNORD116-18-201ENST00000383961 92 ntBASIC0.38□□□□□ -2.35
NEDD4P46934 SNORD77B-201ENST00000391112 67 ntBASIC0.38□□□□□ -2.35
NEDD4P46934 SNORA40.8-201ENST00000411034 126 ntBASIC0.38□□□□□ -2.35
NEDD4P46934 SNORD67.1-201ENST00000516618 108 ntBASIC0.38□□□□□ -2.35
NEDD4P46934 Y_RNA.697-201ENST00000516776 113 ntBASIC0.38□□□□□ -2.35
NEDD4P46934 MIR548X2-201ENST00000579776 100 ntBASIC0.38□□□□□ -2.35
NEDD4P46934 RNA5SP517-201ENST00000364724 117 ntBASIC0.38□□□□□ -2.35
NEDD4P46934 SNORD71-201ENST00000411292 86 ntBASIC0.38□□□□□ -2.35
NEDD4P46934 RNU5E-3P-201ENST00000515913 68 ntBASIC0.38□□□□□ -2.35
NEDD4P46934 SNORA25.12-201ENST00000516202 82 ntBASIC0.38□□□□□ -2.35
NEDD4P46934 FAM13A-AS1_1.1-201ENST00000612555 119 ntBASIC0.38□□□□□ -2.35
NEDD4P46934 AC090625.1-201ENST00000357130 210 ntBASIC0.37□□□□□ -2.35
NEDD4P46934 Y_RNA.85-201ENST00000363014 111 ntBASIC0.37□□□□□ -2.35
NEDD4P46934 RNU6-508P-201ENST00000363231 103 ntBASIC0.37□□□□□ -2.35
NEDD4P46934 RNA5SP133-201ENST00000363368 119 ntBASIC0.37□□□□□ -2.35
NEDD4P46934 RNY1P2-201ENST00000364820 117 ntBASIC0.37□□□□□ -2.35
NEDD4P46934 RNU6-915P-201ENST00000364943 103 ntBASIC0.37□□□□□ -2.35
NEDD4P46934 Y_RNA.400-201ENST00000383963 111 ntBASIC0.37□□□□□ -2.35
NEDD4P46934 RNU6-804P-201ENST00000384286 107 ntBASIC0.37□□□□□ -2.35
NEDD4P46934 RNU6-291P-201ENST00000384720 107 ntBASIC0.37□□□□□ -2.35
NEDD4P46934 RNU6-535P-201ENST00000384722 107 ntBASIC0.37□□□□□ -2.35
NEDD4P46934 TRAJ1-201ENST00000390536 62 ntAPPRIS P1 BASIC0.37□□□□□ -2.35
NEDD4P46934 PCNPP3-201ENST00000393579 471 ntBASIC0.37□□□□□ -2.35
NEDD4P46934 ATP6V0E1P1-201ENST00000412537 226 ntBASIC0.37□□□□□ -2.35
NEDD4P46934 SNORA31.14-201ENST00000516728 116 ntBASIC0.37□□□□□ -2.35
NEDD4P46934 AC090425.1-201ENST00000610007 140 ntBASIC0.37□□□□□ -2.35
NEDD4P46934 Y_RNA.567-201ENST00000384736 106 ntBASIC0.36□□□□□ -2.35
NEDD4P46934 MIR518A1-201ENST00000385068 85 ntBASIC0.36□□□□□ -2.35
NEDD4P46934 MIRLET7F2-201ENST00000385277 83 ntBASIC0.36□□□□□ -2.35
NEDD4P46934 RNU6-460P-201ENST00000391158 108 ntBASIC0.36□□□□□ -2.35
NEDD4P46934 RNU6-531P-201ENST00000516694 104 ntBASIC0.36□□□□□ -2.35
NEDD4P46934 AP001328.1-201ENST00000528550 176 ntBASIC0.36□□□□□ -2.35
NEDD4P46934 AC138749.4-201ENST00000563970 127 ntBASIC0.36□□□□□ -2.35
NEDD4P46934 AL359881.1-201ENST00000602916 267 ntBASIC0.36□□□□□ -2.35
NEDD4P46934 U6.109-201ENST00000636749 87 ntBASIC0.36□□□□□ -2.35
NEDD4P46934 Y_RNA.32-201ENST00000362589 110 ntBASIC0.35□□□□□ -2.35
NEDD4P46934 Y_RNA.119-201ENST00000363301 96 ntBASIC0.35□□□□□ -2.35
NEDD4P46934 Y_RNA.150-201ENST00000363562 102 ntBASIC0.35□□□□□ -2.35
NEDD4P46934 Y_RNA.215-201ENST00000364204 112 ntBASIC0.35□□□□□ -2.35
NEDD4P46934 Y_RNA.555-201ENST00000384673 110 ntBASIC0.35□□□□□ -2.35
NEDD4P46934 MIR644A-201ENST00000385262 94 ntBASIC0.35□□□□□ -2.35
NEDD4P46934 MIR1197-201ENST00000408818 88 ntBASIC0.35□□□□□ -2.35
NEDD4P46934 AC108059.2-201ENST00000434626 151 ntBASIC0.35□□□□□ -2.35
NEDD4P46934 RNU6-863P-201ENST00000515989 104 ntBASIC0.35□□□□□ -2.35
NEDD4P46934 RNY4P20-201ENST00000516678 93 ntBASIC0.35□□□□□ -2.35
NEDD4P46934 MTND5P34-201ENST00000568888 325 ntBASIC0.35□□□□□ -2.35
NEDD4P46934 AC023932.2-201ENST00000603176 175 ntBASIC0.35□□□□□ -2.35
NEDD4P46934 AC108081.1-201ENST00000604358 221 ntBASIC0.35□□□□□ -2.35
NEDD4P46934 MIR101-2-201ENST00000362195 79 ntBASIC0.34□□□□□ -2.36
NEDD4P46934 MIRLET7D-201ENST00000362263 87 ntBASIC0.34□□□□□ -2.36
NEDD4P46934 Y_RNA.8-201ENST00000362353 102 ntBASIC0.34□□□□□ -2.36
NEDD4P46934 Y_RNA.56-201ENST00000362798 112 ntBASIC0.34□□□□□ -2.36
NEDD4P46934 RNA5SP257-201ENST00000363023 116 ntBASIC0.34□□□□□ -2.36
NEDD4P46934 Y_RNA.98-201ENST00000363109 102 ntBASIC0.34□□□□□ -2.36
NEDD4P46934 RNU6-1099P-201ENST00000363533 107 ntBASIC0.34□□□□□ -2.36
NEDD4P46934 SNORD118-201ENST00000363593 134 ntBASIC0.34□□□□□ -2.36
NEDD4P46934 RNU6-647P-201ENST00000364243 107 ntBASIC0.34□□□□□ -2.36
NEDD4P46934 Y_RNA.398-201ENST00000383952 99 ntBASIC0.34□□□□□ -2.36
NEDD4P46934 SNORA8.2-201ENST00000384372 139 ntBASIC0.34□□□□□ -2.36
NEDD4P46934 RNU6-429P-201ENST00000384582 108 ntBASIC0.34□□□□□ -2.36
NEDD4P46934 LINC00345-201ENST00000443679 285 ntTSL 5 BASIC0.34□□□□□ -2.36
NEDD4P46934 SNORA68.3-201ENST00000515906 83 ntBASIC0.34□□□□□ -2.36
NEDD4P46934 MIR2909-201ENST00000617113 69 ntBASIC0.34□□□□□ -2.36
NEDD4P46934 VPS35-212ENST00000640313 141 ntTSL 5 BASIC0.34□□□□□ -2.36
NEDD4P46934 RNU6-1229P-201ENST00000364295 107 ntBASIC0.33□□□□□ -2.36
NEDD4P46934 Y_RNA.464-201ENST00000384282 110 ntBASIC0.33□□□□□ -2.36
NEDD4P46934 MIR1270-201ENST00000459320 83 ntBASIC0.33□□□□□ -2.36
NEDD4P46934 MIR3671-201ENST00000580455 88 ntBASIC0.33□□□□□ -2.36
NEDD4P46934 MIR4639-201ENST00000584938 69 ntBASIC0.33□□□□□ -2.36
NEDD4P46934 RNU7-10P-201ENST00000607194 63 ntBASIC0.33□□□□□ -2.36
NEDD4P46934 Y_RNA.114-201ENST00000363265 113 ntBASIC0.32□□□□□ -2.36
NEDD4P46934 Y_RNA.180-201ENST00000363867 113 ntBASIC0.32□□□□□ -2.36
NEDD4P46934 AC022523.2-201ENST00000561045 150 ntBASIC0.32□□□□□ -2.36
NEDD4P46934 MIR548H5-201ENST00000580314 60 ntBASIC0.32□□□□□ -2.36
NEDD4P46934 AC105081.1-201ENST00000617727 106 ntBASIC0.32□□□□□ -2.36
NEDD4P46934 MIR6828-201ENST00000636181 60 ntBASIC0.32□□□□□ -2.36
NEDD4P46934 SNORD44.1-201ENST00000363202 61 ntBASIC0.31□□□□□ -2.36
NEDD4P46934 SNORA36.1-201ENST00000363424 132 ntBASIC0.31□□□□□ -2.36
NEDD4P46934 SNORD28-201ENST00000384706 75 ntBASIC0.31□□□□□ -2.36
NEDD4P46934 RNU6-1104P-201ENST00000384723 104 ntBASIC0.31□□□□□ -2.36
NEDD4P46934 MIR206-201ENST00000384872 86 ntBASIC0.31□□□□□ -2.36
NEDD4P46934 MIR759-201ENST00000390224 91 ntBASIC0.31□□□□□ -2.36
NEDD4P46934 RNU6-1321P-201ENST00000390905 107 ntBASIC0.31□□□□□ -2.36
Retrieved 100 of 98,524 protein–RNA pairs in 169.5 ms