Protein–RNA interactions for Protein: P46779

RPL28, 60S ribosomal protein L28, humanhuman

Known RBP Predictions only

Length 137 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPL28P46779 RNU6-170P-201ENST00000362832 104 ntBASIC-0.93□□□□□ -2.56
RPL28P46779 MIR624-201ENST00000385217 97 ntBASIC-0.93□□□□□ -2.56
RPL28P46779 SNORA49-201ENST00000386157 136 ntBASIC-0.93□□□□□ -2.56
RPL28P46779 MT-TY-201ENST00000387409 66 ntBASIC-0.93□□□□□ -2.56
RPL28P46779 RNU6-721P-201ENST00000410155 105 ntBASIC-0.93□□□□□ -2.56
RPL28P46779 RNU6-121P-201ENST00000410525 99 ntBASIC-0.93□□□□□ -2.56
RPL28P46779 RNU4-43P-201ENST00000410628 137 ntBASIC-0.93□□□□□ -2.56
RPL28P46779 AL589823.1-201ENST00000429577 183 ntBASIC-0.93□□□□□ -2.56
RPL28P46779 SNORA13-201ENST00000458790 133 ntBASIC-0.93□□□□□ -2.56
RPL28P46779 AC090574.1-201ENST00000623186 233 ntBASIC-0.93□□□□□ -2.56
RPL28P46779 AC073869.6-201ENST00000640656 341 ntBASIC-0.93□□□□□ -2.56
RPL28P46779 SNORD115-44-201ENST00000365391 82 ntBASIC-0.94□□□□□ -2.56
RPL28P46779 RNU6-1062P-201ENST00000383908 107 ntBASIC-0.94□□□□□ -2.56
RPL28P46779 Y_RNA.384-201ENST00000383909 102 ntBASIC-0.94□□□□□ -2.56
RPL28P46779 Y_RNA.484-201ENST00000384389 103 ntBASIC-0.94□□□□□ -2.56
RPL28P46779 Y_RNA.531-201ENST00000384589 121 ntBASIC-0.94□□□□□ -2.56
RPL28P46779 snoU13.13-201ENST00000458842 104 ntBASIC-0.94□□□□□ -2.56
RPL28P46779 RNU7-48P-201ENST00000458875 63 ntBASIC-0.94□□□□□ -2.56
RPL28P46779 MIR2113-201ENST00000459007 91 ntBASIC-0.94□□□□□ -2.56
RPL28P46779 RNU4ATAC4P-201ENST00000516307 126 ntBASIC-0.94□□□□□ -2.56
RPL28P46779 RRM2B-207ENST00000519962 201 ntTSL 1 (best) BASIC-0.94□□□□□ -2.56
RPL28P46779 snoU2_19.2-201ENST00000363024 80 ntBASIC-0.95□□□□□ -2.56
RPL28P46779 RNU6-978P-201ENST00000364371 103 ntBASIC-0.95□□□□□ -2.56
RPL28P46779 Y_RNA.518-201ENST00000384552 113 ntBASIC-0.95□□□□□ -2.56
RPL28P46779 MIR206-201ENST00000384872 86 ntBASIC-0.95□□□□□ -2.56
RPL28P46779 MIR196A1-201ENST00000388006 70 ntBASIC-0.95□□□□□ -2.56
RPL28P46779 RNU6-1307P-201ENST00000391012 103 ntBASIC-0.95□□□□□ -2.56
RPL28P46779 AC023051.1-201ENST00000414098 876 ntTSL 5 BASIC-0.95□□□□□ -2.56
RPL28P46779 AC244090.1-201ENST00000441884 93 ntBASIC-0.95□□□□□ -2.56
RPL28P46779 snoU13.19-201ENST00000459148 104 ntBASIC-0.95□□□□□ -2.56
RPL28P46779 Y_RNA.648-201ENST00000459455 110 ntBASIC-0.95□□□□□ -2.56
RPL28P46779 RNU6-502P-201ENST00000362419 108 ntBASIC-0.96□□□□□ -2.56
RPL28P46779 Y_RNA.127-201ENST00000363386 109 ntBASIC-0.96□□□□□ -2.56
RPL28P46779 Y_RNA.318-201ENST00000365131 97 ntBASIC-0.96□□□□□ -2.56
RPL28P46779 RNU6-728P-201ENST00000365375 104 ntBASIC-0.96□□□□□ -2.56
RPL28P46779 SNORA51.5-201ENST00000384126 131 ntBASIC-0.96□□□□□ -2.56
RPL28P46779 Y_RNA.448-201ENST00000384185 108 ntBASIC-0.96□□□□□ -2.56
RPL28P46779 MIR652-201ENST00000385278 98 ntBASIC-0.96□□□□□ -2.56
RPL28P46779 TRAJ57-201ENST00000390482 63 ntAPPRIS P1 BASIC-0.96□□□□□ -2.56
RPL28P46779 RNU6-876P-201ENST00000391295 104 ntBASIC-0.96□□□□□ -2.56
RPL28P46779 MTATP6P23-201ENST00000440153 476 ntBASIC-0.96□□□□□ -2.56
RPL28P46779 SNORD116-25-201ENST00000516517 92 ntBASIC-0.96□□□□□ -2.56
RPL28P46779 MTND5P18-201ENST00000445624 1801 ntBASIC-0.96□□□□□ -2.56
RPL28P46779 MT-ATP8-201ENST00000361851 207 ntAPPRIS P1 BASIC-0.97□□□□□ -2.56
RPL28P46779 Y_RNA.60-201ENST00000362831 98 ntBASIC-0.97□□□□□ -2.56
RPL28P46779 Y_RNA.98-201ENST00000363109 102 ntBASIC-0.97□□□□□ -2.56
RPL28P46779 RNU6-1289P-201ENST00000384431 106 ntBASIC-0.97□□□□□ -2.56
RPL28P46779 RNU6-30P-201ENST00000384561 107 ntBASIC-0.97□□□□□ -2.56
RPL28P46779 RNY1P7-201ENST00000384743 110 ntBASIC-0.97□□□□□ -2.56
RPL28P46779 RNU6-287P-201ENST00000516230 98 ntBASIC-0.97□□□□□ -2.56
RPL28P46779 RNU2-35P-201ENST00000516446 142 ntBASIC-0.97□□□□□ -2.56
RPL28P46779 AP001825.1-201ENST00000534275 351 ntTSL 2 BASIC-0.97□□□□□ -2.56
RPL28P46779 AC007012.1-201ENST00000567192 175 ntBASIC-0.97□□□□□ -2.56
RPL28P46779 MIR548AX-201ENST00000580117 73 ntBASIC-0.97□□□□□ -2.56
RPL28P46779 KCNQ1OT1_5.1-201ENST00000621902 226 ntBASIC-0.97□□□□□ -2.56
RPL28P46779 AP001362.1-201ENST00000625165 124 ntBASIC-0.97□□□□□ -2.56
RPL28P46779 MIR1302-1-201ENST00000637932 143 ntBASIC-0.97□□□□□ -2.56
RPL28P46779 SNORD115-25-201ENST00000362619 82 ntBASIC-0.98□□□□□ -2.57
RPL28P46779 Y_RNA.275-201ENST00000364726 110 ntBASIC-0.98□□□□□ -2.57
RPL28P46779 SNORD116-4-201ENST00000384733 96 ntBASIC-0.98□□□□□ -2.57
RPL28P46779 MIR518B-201ENST00000385127 83 ntBASIC-0.98□□□□□ -2.57
RPL28P46779 SNORD19B-201ENST00000459623 84 ntBASIC-0.98□□□□□ -2.57
RPL28P46779 MIR3179-1-201ENST00000578940 84 ntBASIC-0.98□□□□□ -2.57
RPL28P46779 MIR3179-2-201ENST00000579107 84 ntBASIC-0.98□□□□□ -2.57
RPL28P46779 MIR3179-3-201ENST00000579566 84 ntBASIC-0.98□□□□□ -2.57
RPL28P46779 AC093783.1-201ENST00000612976 329 ntBASIC-0.98□□□□□ -2.57
RPL28P46779 MIR3179-4-201ENST00000617599 84 ntBASIC-0.98□□□□□ -2.57
RPL28P46779 Y_RNA.31-201ENST00000362574 102 ntBASIC-0.99□□□□□ -2.57
RPL28P46779 RNU6-571P-201ENST00000384128 107 ntBASIC-0.99□□□□□ -2.57
RPL28P46779 RNU6-381P-201ENST00000391259 108 ntBASIC-0.99□□□□□ -2.57
RPL28P46779 Y_RNA.632-201ENST00000459189 102 ntBASIC-0.99□□□□□ -2.57
RPL28P46779 MRPS18CP4-201ENST00000535821 231 ntBASIC-0.99□□□□□ -2.57
RPL28P46779 AP005120.1-201ENST00000579321 352 ntTSL 3 BASIC-0.99□□□□□ -2.57
RPL28P46779 Y_RNA.35-201ENST00000362601 101 ntBASIC-1□□□□□ -2.57
RPL28P46779 Y_RNA.357-201ENST00000365487 109 ntBASIC-1□□□□□ -2.57
RPL28P46779 Y_RNA.785-201ENST00000384290 109 ntBASIC-1□□□□□ -2.57
RPL28P46779 snoU13.11-201ENST00000459219 104 ntBASIC-1□□□□□ -2.57
RPL28P46779 SERF1AP1-201ENST00000514575 187 ntBASIC-1□□□□□ -2.57
RPL28P46779 SNORD22.1-201ENST00000516331 125 ntBASIC-1□□□□□ -2.57
RPL28P46779 SNORA40.17-201ENST00000517256 115 ntBASIC-1□□□□□ -2.57
RPL28P46779 AL132765.2-201ENST00000610812 351 ntBASIC-1□□□□□ -2.57
RPL28P46779 Y_RNA.64-201ENST00000362845 102 ntBASIC-1.01□□□□□ -2.57
RPL28P46779 Y_RNA.117-201ENST00000363294 101 ntBASIC-1.01□□□□□ -2.57
RPL28P46779 SNORD114-25-201ENST00000363742 72 ntBASIC-1.01□□□□□ -2.57
RPL28P46779 RNU6-973P-201ENST00000364690 107 ntBASIC-1.01□□□□□ -2.57
RPL28P46779 Y_RNA.328-201ENST00000365208 113 ntBASIC-1.01□□□□□ -2.57
RPL28P46779 SNORD83B-201ENST00000386745 93 ntBASIC-1.01□□□□□ -2.57
RPL28P46779 MIR1252-201ENST00000408861 65 ntBASIC-1.01□□□□□ -2.57
RPL28P46779 RNU4-69P-201ENST00000410677 143 ntBASIC-1.01□□□□□ -2.57
RPL28P46779 SNORD2.1-201ENST00000458762 69 ntBASIC-1.01□□□□□ -2.57
RPL28P46779 AC008883.1-201ENST00000506562 193 ntTSL 3 BASIC-1.01□□□□□ -2.57
RPL28P46779 RNU6-1236P-201ENST00000517080 99 ntBASIC-1.01□□□□□ -2.57
RPL28P46779 CR383656.11-201ENST00000552261 498 ntTSL 3 BASIC-1.01□□□□□ -2.57
RPL28P46779 AC020913.3-201ENST00000594678 125 ntTSL 3 BASIC-1.01□□□□□ -2.57
RPL28P46779 RNU2-4P-201ENST00000606190 192 ntBASIC-1.01□□□□□ -2.57
RPL28P46779 CDKN3-212ENST00000620759 196 ntTSL 5 BASIC-1.01□□□□□ -2.57
RPL28P46779 Y_RNA.16-201ENST00000362421 102 ntBASIC-1.02□□□□□ -2.57
RPL28P46779 Y_RNA.142-201ENST00000363491 102 ntBASIC-1.02□□□□□ -2.57
RPL28P46779 Y_RNA.189-201ENST00000363959 112 ntBASIC-1.02□□□□□ -2.57
RPL28P46779 Y_RNA.246-201ENST00000364495 108 ntBASIC-1.02□□□□□ -2.57
Retrieved 100 of 98,524 protein–RNA pairs in 104.5 ms