Protein–RNA interactions for Protein: P39086

GRIK1, Glutamate receptor ionotropic, kainate 1, humanhuman

Predictions only

Length 918 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GRIK1P39086 WWP1P1-201ENST00000466609 2769 ntBASIC2.22□□□□□ -2.05
GRIK1P39086 KNL1-204ENST00000527044 5404 ntTSL 5 BASIC2.22□□□□□ -2.05
GRIK1P39086 Y_RNA.283-201ENST00000364798 112 ntBASIC2.21□□□□□ -2.06
GRIK1P39086 RNU6-203P-201ENST00000384038 104 ntBASIC2.21□□□□□ -2.06
GRIK1P39086 RNU6-649P-201ENST00000384463 107 ntBASIC2.21□□□□□ -2.06
GRIK1P39086 MIR764-201ENST00000390811 85 ntBASIC2.21□□□□□ -2.06
GRIK1P39086 SNORD77.2-201ENST00000391045 68 ntBASIC2.21□□□□□ -2.06
GRIK1P39086 Y_RNA.596-201ENST00000410462 109 ntBASIC2.21□□□□□ -2.06
GRIK1P39086 RNU7-106P-201ENST00000459514 67 ntBASIC2.21□□□□□ -2.06
GRIK1P39086 MIR514B-201ENST00000516774 80 ntBASIC2.21□□□□□ -2.06
GRIK1P39086 PRELID3BP2-201ENST00000605362 201 ntBASIC2.21□□□□□ -2.06
GRIK1P39086 uc_338.6-201ENST00000613544 171 ntBASIC2.21□□□□□ -2.06
GRIK1P39086 MIR6740-201ENST00000618268 113 ntBASIC2.21□□□□□ -2.06
GRIK1P39086 TAB2-205ENST00000538427 4240 ntAPPRIS P1 TSL 5 BASIC2.21□□□□□ -2.06
GRIK1P39086 RNU6-587P-201ENST00000391282 106 ntBASIC2.2□□□□□ -2.06
GRIK1P39086 SNORD30.1-201ENST00000391309 70 ntBASIC2.2□□□□□ -2.06
GRIK1P39086 RNU6-380P-201ENST00000410207 107 ntBASIC2.2□□□□□ -2.06
GRIK1P39086 AC074348.1-201ENST00000426503 132 ntBASIC2.2□□□□□ -2.06
GRIK1P39086 TTTY16-201ENST00000437686 192 ntTSL 1 (best) BASIC2.2□□□□□ -2.06
GRIK1P39086 snoU13.17-201ENST00000458802 104 ntBASIC2.2□□□□□ -2.06
GRIK1P39086 snoU13.2-201ENST00000459201 104 ntBASIC2.2□□□□□ -2.06
GRIK1P39086 Y_RNA.660-201ENST00000516002 120 ntBASIC2.2□□□□□ -2.06
GRIK1P39086 Y_RNA.681-201ENST00000516445 113 ntBASIC2.2□□□□□ -2.06
GRIK1P39086 MIR3935-201ENST00000583472 104 ntBASIC2.2□□□□□ -2.06
GRIK1P39086 NEAT1_2.1-201ENST00000620525 105 ntBASIC2.2□□□□□ -2.06
GRIK1P39086 ZNF654-201ENST00000309495 4957 ntAPPRIS P2 TSL 1 (best) BASIC2.2□□□□□ -2.06
GRIK1P39086 MIER3-202ENST00000381199 5188 ntAPPRIS ALT1 TSL 1 (best) BASIC2.19□□□□□ -2.06
GRIK1P39086 RNU6-208P-201ENST00000362431 107 ntBASIC2.19□□□□□ -2.06
GRIK1P39086 SNORA25.9-201ENST00000365087 128 ntBASIC2.19□□□□□ -2.06
GRIK1P39086 RNU6-571P-201ENST00000384128 107 ntBASIC2.19□□□□□ -2.06
GRIK1P39086 RNU4-52P-201ENST00000384209 138 ntBASIC2.19□□□□□ -2.06
GRIK1P39086 Y_RNA.491-201ENST00000384417 107 ntBASIC2.19□□□□□ -2.06
GRIK1P39086 MIR588-201ENST00000384900 83 ntBASIC2.19□□□□□ -2.06
GRIK1P39086 MIR4713-201ENST00000582691 75 ntBASIC2.19□□□□□ -2.06
GRIK1P39086 RNU6-957P-201ENST00000363652 99 ntBASIC2.18□□□□□ -2.06
GRIK1P39086 RNU6-800P-201ENST00000384473 103 ntBASIC2.18□□□□□ -2.06
GRIK1P39086 RNU6-1241P-201ENST00000384536 107 ntBASIC2.18□□□□□ -2.06
GRIK1P39086 TRAJ11-201ENST00000390526 60 ntAPPRIS P1 BASIC2.18□□□□□ -2.06
GRIK1P39086 U8.13-201ENST00000390842 128 ntBASIC2.18□□□□□ -2.06
GRIK1P39086 IL6ST-207ENST00000396816 168 ntTSL 1 (best) BASIC2.18□□□□□ -2.06
GRIK1P39086 MIR1302-7-201ENST00000408841 72 ntBASIC2.18□□□□□ -2.06
GRIK1P39086 AC104435.1-201ENST00000483483 166 ntBASIC2.18□□□□□ -2.06
GRIK1P39086 RNU6-807P-201ENST00000516805 107 ntBASIC2.18□□□□□ -2.06
GRIK1P39086 MIR4299-201ENST00000577899 72 ntBASIC2.18□□□□□ -2.06
GRIK1P39086 AP000942.3-201ENST00000603702 160 ntBASIC2.18□□□□□ -2.06
GRIK1P39086 Y_RNA.783-201ENST00000613546 102 ntBASIC2.18□□□□□ -2.06
GRIK1P39086 RNU6ATAC38P-201ENST00000408119 126 ntBASIC2.17□□□□□ -2.06
GRIK1P39086 AL356379.1-201ENST00000414105 126 ntBASIC2.17□□□□□ -2.06
GRIK1P39086 HMGN2P38-201ENST00000423806 265 ntBASIC2.17□□□□□ -2.06
GRIK1P39086 AC015818.7-201ENST00000428754 109 ntBASIC2.17□□□□□ -2.06
GRIK1P39086 MIR3192-201ENST00000584920 77 ntBASIC2.17□□□□□ -2.06
GRIK1P39086 U6.111-201ENST00000636093 83 ntBASIC2.17□□□□□ -2.06
GRIK1P39086 OXR1-209ENST00000517566 4501 ntTSL 1 (best) BASIC2.17□□□□□ -2.06
GRIK1P39086 ZNF209P-201ENST00000593450 2304 ntBASIC2.16□□□□□ -2.06
GRIK1P39086 MIR30D-201ENST00000362283 70 ntBASIC2.16□□□□□ -2.06
GRIK1P39086 Y_RNA.12-201ENST00000362393 112 ntBASIC2.16□□□□□ -2.06
GRIK1P39086 RNU5F-1-201ENST00000362507 117 ntBASIC2.16□□□□□ -2.06
GRIK1P39086 MIR9-2-201ENST00000384838 87 ntBASIC2.16□□□□□ -2.06
GRIK1P39086 MIR563-201ENST00000385080 79 ntBASIC2.16□□□□□ -2.06
GRIK1P39086 MIR2113-201ENST00000459007 91 ntBASIC2.16□□□□□ -2.06
GRIK1P39086 RNU6-303P-201ENST00000517091 106 ntBASIC2.16□□□□□ -2.06
GRIK1P39086 CERS6-AS1-202ENST00000594898 499 ntTSL 5 BASIC2.16□□□□□ -2.06
GRIK1P39086 CEP162-201ENST00000257766 5063 ntTSL 1 (best) BASIC2.16□□□□□ -2.06
GRIK1P39086 ASPM-202ENST00000367408 3747 ntTSL 1 (best) BASIC2.15□□□□□ -2.06
GRIK1P39086 SNORA25.3-201ENST00000363205 127 ntBASIC2.15□□□□□ -2.07
GRIK1P39086 RNU6-1254P-201ENST00000391266 104 ntBASIC2.15□□□□□ -2.07
GRIK1P39086 RNU2-59P-201ENST00000410482 191 ntBASIC2.15□□□□□ -2.07
GRIK1P39086 MIR5002-201ENST00000584713 97 ntBASIC2.15□□□□□ -2.07
GRIK1P39086 AP000553.5-201ENST00000641933 54 ntBASIC2.15□□□□□ -2.07
GRIK1P39086 BRCA1-202ENST00000354071 4497 ntTSL 1 (best) BASIC2.15□□□□□ -2.07
GRIK1P39086 MIR676-201ENST00000390702 67 ntBASIC2.14□□□□□ -2.07
GRIK1P39086 RNU6-205P-201ENST00000390858 107 ntBASIC2.14□□□□□ -2.07
GRIK1P39086 RNU6-243P-201ENST00000391140 107 ntBASIC2.14□□□□□ -2.07
GRIK1P39086 5S_rRNA.2-201ENST00000391293 112 ntBASIC2.14□□□□□ -2.07
GRIK1P39086 AL606490.4-201ENST00000423117 127 ntBASIC2.14□□□□□ -2.07
GRIK1P39086 HMGN2P19-201ENST00000425149 265 ntBASIC2.14□□□□□ -2.07
GRIK1P39086 AL603825.1-201ENST00000438481 80 ntBASIC2.14□□□□□ -2.07
GRIK1P39086 RNU6-548P-201ENST00000517083 115 ntBASIC2.14□□□□□ -2.07
GRIK1P39086 RNU7-156P-201ENST00000517214 74 ntBASIC2.14□□□□□ -2.07
GRIK1P39086 MIR1297-201ENST00000637311 77 ntBASIC2.14□□□□□ -2.07
GRIK1P39086 SCN7A-206ENST00000619410 7186 ntAPPRIS P1 TSL 5 BASIC2.14□□□□□ -2.07
GRIK1P39086 SCN7A-207ENST00000621965 7186 ntAPPRIS P1 TSL 5 BASIC2.14□□□□□ -2.07
GRIK1P39086 AL359851.1-201ENST00000569460 4997 ntBASIC2.13□□□□□ -2.07
GRIK1P39086 ZBBX-205ENST00000455345 3185 ntAPPRIS ALT2 TSL 1 (best) BASIC2.13□□□□□ -2.07
GRIK1P39086 TRAJ23-201ENST00000390514 63 ntAPPRIS P1 BASIC2.13□□□□□ -2.07
GRIK1P39086 AC245517.4-201ENST00000448601 281 ntBASIC2.13□□□□□ -2.07
GRIK1P39086 snoU13.25-201ENST00000458945 104 ntBASIC2.13□□□□□ -2.07
GRIK1P39086 RPL23AP42-201ENST00000471152 471 ntBASIC2.13□□□□□ -2.07
GRIK1P39086 RNU6-531P-201ENST00000516694 104 ntBASIC2.13□□□□□ -2.07
GRIK1P39086 SNORA25.16-201ENST00000516741 121 ntBASIC2.13□□□□□ -2.07
GRIK1P39086 SNORA4-201ENST00000584302 138 ntBASIC2.13□□□□□ -2.07
GRIK1P39086 PTPRQ-209ENST00000616559 8165 ntTSL 5 BASIC2.13□□□□□ -2.07
GRIK1P39086 MIR337-201ENST00000362281 93 ntBASIC2.12□□□□□ -2.07
GRIK1P39086 RNU6-1123P-201ENST00000362347 106 ntBASIC2.12□□□□□ -2.07
GRIK1P39086 MIR154-201ENST00000385243 84 ntBASIC2.12□□□□□ -2.07
GRIK1P39086 MIR518E-201ENST00000385252 88 ntBASIC2.12□□□□□ -2.07
GRIK1P39086 SNORD41-201ENST00000386967 70 ntBASIC2.12□□□□□ -2.07
GRIK1P39086 RNU6-663P-201ENST00000391105 106 ntBASIC2.12□□□□□ -2.07
GRIK1P39086 ATP6V0E1P3-201ENST00000420036 246 ntBASIC2.12□□□□□ -2.07
GRIK1P39086 JTBP1-201ENST00000441314 247 ntBASIC2.12□□□□□ -2.07
Retrieved 100 of 98,524 protein–RNA pairs in 197.4 ms