Protein–RNA interactions for Protein: P39060

COL18A1, Collagen alpha-1(XVIII) chain, humanhuman

Predictions only

Length 1,754 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL18A1P39060 RNU6-1289P-201ENST00000384431 106 ntBASIC-0.52□□□□□ -2.49
COL18A1P39060 MIR196A1-201ENST00000388006 70 ntBASIC-0.52□□□□□ -2.49
COL18A1P39060 MIR876-201ENST00000401147 81 ntBASIC-0.52□□□□□ -2.49
COL18A1P39060 BX276092.1-201ENST00000427368 251 ntBASIC-0.52□□□□□ -2.49
COL18A1P39060 AC108059.2-201ENST00000434626 151 ntBASIC-0.52□□□□□ -2.49
COL18A1P39060 AC021146.9-201ENST00000512503 156 ntBASIC-0.52□□□□□ -2.49
COL18A1P39060 AC105081.1-201ENST00000617727 106 ntBASIC-0.52□□□□□ -2.49
COL18A1P39060 uc_338.10-201ENST00000621872 182 ntBASIC-0.52□□□□□ -2.49
COL18A1P39060 RNY1P2-201ENST00000364820 117 ntBASIC-0.53□□□□□ -2.49
COL18A1P39060 RNU6-284P-201ENST00000411105 106 ntBASIC-0.53□□□□□ -2.49
COL18A1P39060 ELOCP20-201ENST00000422460 345 ntBASIC-0.53□□□□□ -2.49
COL18A1P39060 AC098479.1-201ENST00000609225 154 ntBASIC-0.53□□□□□ -2.49
COL18A1P39060 MIR4788-201ENST00000639104 80 ntBASIC-0.53□□□□□ -2.49
COL18A1P39060 MT-ATP8-201ENST00000361851 207 ntAPPRIS P1 BASIC-0.54□□□□□ -2.5
COL18A1P39060 Y_RNA.57-201ENST00000362806 113 ntBASIC-0.54□□□□□ -2.5
COL18A1P39060 Y_RNA.221-201ENST00000364248 96 ntBASIC-0.54□□□□□ -2.5
COL18A1P39060 snoU2_19.4-201ENST00000364329 80 ntBASIC-0.54□□□□□ -2.5
COL18A1P39060 RNY1P6-201ENST00000384193 109 ntBASIC-0.54□□□□□ -2.5
COL18A1P39060 SNORA25.13-201ENST00000516395 103 ntBASIC-0.54□□□□□ -2.5
COL18A1P39060 SCARNA15-202ENST00000516881 127 ntBASIC-0.54□□□□□ -2.5
COL18A1P39060 NAMPTP3-201ENST00000569273 224 ntBASIC-0.54□□□□□ -2.5
COL18A1P39060 HOTAIRM1_4.1-201ENST00000617934 102 ntBASIC-0.54□□□□□ -2.5
COL18A1P39060 Y_RNA.19-201ENST00000362462 99 ntBASIC-0.55□□□□□ -2.5
COL18A1P39060 Y_RNA.275-201ENST00000364726 110 ntBASIC-0.55□□□□□ -2.5
COL18A1P39060 Y_RNA.366-201ENST00000365540 102 ntBASIC-0.55□□□□□ -2.5
COL18A1P39060 Y_RNA.529-201ENST00000384586 119 ntBASIC-0.55□□□□□ -2.5
COL18A1P39060 RNU4-43P-201ENST00000410628 137 ntBASIC-0.55□□□□□ -2.5
COL18A1P39060 RNA5SP180-201ENST00000516181 101 ntBASIC-0.55□□□□□ -2.5
COL18A1P39060 RNU6-1338P-201ENST00000516328 91 ntBASIC-0.55□□□□□ -2.5
COL18A1P39060 MIR4500-201ENST00000579472 76 ntBASIC-0.55□□□□□ -2.5
COL18A1P39060 AC079466.2-201ENST00000585394 185 ntTSL 5 BASIC-0.55□□□□□ -2.5
COL18A1P39060 RNU6-865P-201ENST00000364772 107 ntBASIC-0.55□□□□□ -2.5
COL18A1P39060 RNU6-119P-201ENST00000364882 107 ntBASIC-0.55□□□□□ -2.5
COL18A1P39060 Y_RNA.395-201ENST00000383945 109 ntBASIC-0.55□□□□□ -2.5
COL18A1P39060 Y_RNA.470-201ENST00000384307 117 ntBASIC-0.55□□□□□ -2.5
COL18A1P39060 MIR624-201ENST00000385217 97 ntBASIC-0.55□□□□□ -2.5
COL18A1P39060 AC113618.1-201ENST00000416747 285 ntBASIC-0.55□□□□□ -2.5
COL18A1P39060 RNU6-875P-201ENST00000516488 106 ntBASIC-0.55□□□□□ -2.5
COL18A1P39060 AC139792.2-201ENST00000624218 587 ntBASIC-0.55□□□□□ -2.5
COL18A1P39060 Y_RNA.214-201ENST00000364201 112 ntBASIC-0.56□□□□□ -2.5
COL18A1P39060 RNU4-16P-201ENST00000364737 141 ntBASIC-0.56□□□□□ -2.5
COL18A1P39060 Y_RNA.475-201ENST00000384345 101 ntBASIC-0.56□□□□□ -2.5
COL18A1P39060 RNU6-24P-201ENST00000384440 107 ntBASIC-0.56□□□□□ -2.5
COL18A1P39060 MIR599-201ENST00000385069 95 ntBASIC-0.56□□□□□ -2.5
COL18A1P39060 Y_RNA.619-201ENST00000410951 90 ntBASIC-0.56□□□□□ -2.5
COL18A1P39060 RNU6-561P-201ENST00000516222 102 ntBASIC-0.56□□□□□ -2.5
COL18A1P39060 SNORD67.1-201ENST00000516618 108 ntBASIC-0.56□□□□□ -2.5
COL18A1P39060 SCARNA24.2-201ENST00000516968 130 ntBASIC-0.56□□□□□ -2.5
COL18A1P39060 Y_RNA.31-201ENST00000362574 102 ntBASIC-0.57□□□□□ -2.5
COL18A1P39060 Y_RNA.44-201ENST00000362676 108 ntBASIC-0.57□□□□□ -2.5
COL18A1P39060 Y_RNA.58-201ENST00000362807 102 ntBASIC-0.57□□□□□ -2.5
COL18A1P39060 RNY3P1-201ENST00000365085 102 ntBASIC-0.57□□□□□ -2.5
COL18A1P39060 Y_RNA.477-201ENST00000384352 108 ntBASIC-0.57□□□□□ -2.5
COL18A1P39060 RNA5SP144-201ENST00000410846 116 ntBASIC-0.57□□□□□ -2.5
COL18A1P39060 AC023051.1-201ENST00000414098 876 ntTSL 5 BASIC-0.57□□□□□ -2.5
COL18A1P39060 SPINT5P-201ENST00000448174 155 ntBASIC-0.57□□□□□ -2.5
COL18A1P39060 TRAJ51-201ENST00000504127 63 ntBASIC-0.57□□□□□ -2.5
COL18A1P39060 Y_RNA.696-201ENST00000516725 107 ntBASIC-0.57□□□□□ -2.5
COL18A1P39060 RNU7-137P-201ENST00000516788 62 ntBASIC-0.57□□□□□ -2.5
COL18A1P39060 Y_RNA.711-201ENST00000516993 102 ntBASIC-0.57□□□□□ -2.5
COL18A1P39060 MIR3115-201ENST00000577915 68 ntBASIC-0.57□□□□□ -2.5
COL18A1P39060 FAM13A-AS1_1.1-201ENST00000612555 119 ntBASIC-0.57□□□□□ -2.5
COL18A1P39060 Y_RNA.356-201ENST00000365475 113 ntBASIC-0.57□□□□□ -2.5
COL18A1P39060 AC114755.3-201ENST00000481111 251 ntBASIC-0.57□□□□□ -2.5
COL18A1P39060 AC006504.6-201ENST00000590142 199 ntBASIC-0.57□□□□□ -2.5
COL18A1P39060 MIR6507-201ENST00000613630 70 ntBASIC-0.57□□□□□ -2.5
COL18A1P39060 MIR655-201ENST00000362159 97 ntBASIC-0.58□□□□□ -2.5
COL18A1P39060 Y_RNA.16-201ENST00000362421 102 ntBASIC-0.58□□□□□ -2.5
COL18A1P39060 Y_RNA.84-201ENST00000363011 104 ntBASIC-0.58□□□□□ -2.5
COL18A1P39060 RNU6-103P-201ENST00000363686 107 ntBASIC-0.58□□□□□ -2.5
COL18A1P39060 Y_RNA.263-201ENST00000364659 114 ntBASIC-0.58□□□□□ -2.5
COL18A1P39060 RNU6-811P-201ENST00000384069 107 ntBASIC-0.58□□□□□ -2.5
COL18A1P39060 Y_RNA.531-201ENST00000384589 121 ntBASIC-0.58□□□□□ -2.5
COL18A1P39060 MIR548I2-201ENST00000408348 149 ntBASIC-0.58□□□□□ -2.5
COL18A1P39060 AC092755.1-201ENST00000441746 97 ntTSL 3 BASIC-0.58□□□□□ -2.5
COL18A1P39060 AC082651.2-201ENST00000496833 166 ntBASIC-0.58□□□□□ -2.5
COL18A1P39060 Y_RNA.117-201ENST00000363294 101 ntBASIC-0.59□□□□□ -2.5
COL18A1P39060 RNU6-450P-201ENST00000364654 107 ntBASIC-0.59□□□□□ -2.5
COL18A1P39060 Y_RNA.276-201ENST00000364732 109 ntBASIC-0.59□□□□□ -2.5
COL18A1P39060 Y_RNA.323-201ENST00000365157 109 ntBASIC-0.59□□□□□ -2.5
COL18A1P39060 AL121914.1-201ENST00000450188 156 ntBASIC-0.59□□□□□ -2.5
COL18A1P39060 RNU6-1149P-201ENST00000516810 97 ntBASIC-0.59□□□□□ -2.5
COL18A1P39060 MIR3920-201ENST00000581751 86 ntBASIC-0.59□□□□□ -2.5
COL18A1P39060 MIR4436A-201ENST00000585278 85 ntBASIC-0.59□□□□□ -2.5
COL18A1P39060 Y_RNA.64-201ENST00000362845 102 ntBASIC-0.6□□□□□ -2.5
COL18A1P39060 Y_RNA.120-201ENST00000363304 110 ntBASIC-0.6□□□□□ -2.5
COL18A1P39060 Y_RNA.299-201ENST00000364973 94 ntBASIC-0.6□□□□□ -2.5
COL18A1P39060 Y_RNA.555-201ENST00000384673 110 ntBASIC-0.6□□□□□ -2.5
COL18A1P39060 MIR181B2-201ENST00000385004 89 ntBASIC-0.6□□□□□ -2.5
COL18A1P39060 SNORD83B-201ENST00000386745 93 ntBASIC-0.6□□□□□ -2.5
COL18A1P39060 AC097635.1-201ENST00000450678 155 ntBASIC-0.6□□□□□ -2.5
COL18A1P39060 RNA5SP484-201ENST00000458857 111 ntBASIC-0.6□□□□□ -2.5
COL18A1P39060 MIR4744-201ENST00000581563 82 ntBASIC-0.6□□□□□ -2.5
COL18A1P39060 AL365265.1-201ENST00000621045 234 ntBASIC-0.6□□□□□ -2.5
COL18A1P39060 Y_RNA.82-201ENST00000363000 102 ntBASIC-0.6□□□□□ -2.51
COL18A1P39060 Y_RNA.92-201ENST00000363043 102 ntBASIC-0.6□□□□□ -2.51
COL18A1P39060 Y_RNA.235-201ENST00000364412 102 ntBASIC-0.6□□□□□ -2.51
COL18A1P39060 Y_RNA.306-201ENST00000365015 102 ntBASIC-0.6□□□□□ -2.51
COL18A1P39060 Y_RNA.312-201ENST00000365089 102 ntBASIC-0.6□□□□□ -2.51
COL18A1P39060 RNU6-806P-201ENST00000365147 105 ntBASIC-0.6□□□□□ -2.51
Retrieved 100 of 98,524 protein–RNA pairs in 252.2 ms