Protein–RNA interactions for Protein: P30531

SLC6A1, Sodium- and chloride-dependent GABA transporter 1, humanhuman

Predictions only

Length 599 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A1P30531 MIR516B1-201ENST00000385211 90 ntBASIC-0.52□□□□□ -2.49
SLC6A1P30531 AC244250.2-201ENST00000418731 148 ntBASIC-0.52□□□□□ -2.49
SLC6A1P30531 MTND4LP11-201ENST00000422184 280 ntBASIC-0.52□□□□□ -2.49
SLC6A1P30531 MIR4744-201ENST00000581563 82 ntBASIC-0.52□□□□□ -2.49
SLC6A1P30531 MIR655-201ENST00000362159 97 ntBASIC-0.53□□□□□ -2.49
SLC6A1P30531 Y_RNA.323-201ENST00000365157 109 ntBASIC-0.53□□□□□ -2.49
SLC6A1P30531 RNU6-1321P-201ENST00000390905 107 ntBASIC-0.53□□□□□ -2.49
SLC6A1P30531 RNU2-35P-201ENST00000516446 142 ntBASIC-0.53□□□□□ -2.49
SLC6A1P30531 Y_RNA.711-201ENST00000516993 102 ntBASIC-0.53□□□□□ -2.49
SLC6A1P30531 MIR3920-201ENST00000581751 86 ntBASIC-0.53□□□□□ -2.49
SLC6A1P30531 AL162726.3-218ENST00000636401 95 ntBASIC-0.53□□□□□ -2.49
SLC6A1P30531 Y_RNA.262-201ENST00000364641 102 ntBASIC-0.54□□□□□ -2.5
SLC6A1P30531 Y_RNA.270-201ENST00000364693 104 ntBASIC-0.54□□□□□ -2.5
SLC6A1P30531 SNORD14C-201ENST00000365382 88 ntBASIC-0.54□□□□□ -2.5
SLC6A1P30531 RNU6-811P-201ENST00000384069 107 ntBASIC-0.54□□□□□ -2.5
SLC6A1P30531 RNY3P14-201ENST00000384309 102 ntBASIC-0.54□□□□□ -2.5
SLC6A1P30531 Y_RNA.531-201ENST00000384589 121 ntBASIC-0.54□□□□□ -2.5
SLC6A1P30531 RNU6-578P-201ENST00000390980 103 ntBASIC-0.54□□□□□ -2.5
SLC6A1P30531 SNORD126-201ENST00000459475 77 ntBASIC-0.54□□□□□ -2.5
SLC6A1P30531 RNA5SP236-201ENST00000516169 116 ntBASIC-0.54□□□□□ -2.5
SLC6A1P30531 Y_RNA.696-201ENST00000516725 107 ntBASIC-0.54□□□□□ -2.5
SLC6A1P30531 MIR4500-201ENST00000579472 76 ntBASIC-0.54□□□□□ -2.5
SLC6A1P30531 RN7SL660P-201ENST00000614852 299 ntBASIC-0.54□□□□□ -2.5
SLC6A1P30531 MIR4788-201ENST00000639104 80 ntBASIC-0.54□□□□□ -2.5
SLC6A1P30531 Y_RNA.52-201ENST00000362760 96 ntBASIC-0.55□□□□□ -2.5
SLC6A1P30531 RNU6-1336P-201ENST00000383886 109 ntBASIC-0.55□□□□□ -2.5
SLC6A1P30531 Y_RNA.509-201ENST00000384506 99 ntBASIC-0.55□□□□□ -2.5
SLC6A1P30531 RNU6-1184P-201ENST00000384588 108 ntBASIC-0.55□□□□□ -2.5
SLC6A1P30531 MIR196A2-201ENST00000385189 110 ntBASIC-0.55□□□□□ -2.5
SLC6A1P30531 EBAG9-207ENST00000531677 777 ntTSL 1 (best) BASIC-0.55□□□□□ -2.5
SLC6A1P30531 MIR6507-201ENST00000613630 70 ntBASIC-0.55□□□□□ -2.5
SLC6A1P30531 AL160413.1-201ENST00000622780 310 ntBASIC-0.55□□□□□ -2.5
SLC6A1P30531 ABCA9-AS1-203ENST00000627596 426 ntTSL 5 BASIC-0.55□□□□□ -2.5
SLC6A1P30531 Y_RNA.128-201ENST00000363391 112 ntBASIC-0.56□□□□□ -2.5
SLC6A1P30531 Y_RNA.216-201ENST00000364205 93 ntBASIC-0.56□□□□□ -2.5
SLC6A1P30531 RNA5SP205-201ENST00000364653 136 ntBASIC-0.56□□□□□ -2.5
SLC6A1P30531 SNORD114-15-201ENST00000364687 72 ntBASIC-0.56□□□□□ -2.5
SLC6A1P30531 RNU6-690P-201ENST00000365242 106 ntBASIC-0.56□□□□□ -2.5
SLC6A1P30531 RNU6-643P-201ENST00000384018 107 ntBASIC-0.56□□□□□ -2.5
SLC6A1P30531 RPS29P8-201ENST00000445109 171 ntBASIC-0.56□□□□□ -2.5
SLC6A1P30531 RNU6-1137P-201ENST00000517073 99 ntBASIC-0.56□□□□□ -2.5
SLC6A1P30531 MRPS18CP4-201ENST00000535821 231 ntBASIC-0.56□□□□□ -2.5
SLC6A1P30531 MIR335-201ENST00000362173 94 ntBASIC-0.57□□□□□ -2.5
SLC6A1P30531 SNORA25.7-201ENST00000364375 127 ntBASIC-0.57□□□□□ -2.5
SLC6A1P30531 U8.6-201ENST00000364939 135 ntBASIC-0.57□□□□□ -2.5
SLC6A1P30531 Y_RNA.391-201ENST00000383933 94 ntBASIC-0.57□□□□□ -2.5
SLC6A1P30531 Y_RNA.448-201ENST00000384185 108 ntBASIC-0.57□□□□□ -2.5
SLC6A1P30531 AC022028.1-201ENST00000412054 408 ntBASIC-0.57□□□□□ -2.5
SLC6A1P30531 RNU7-195P-201ENST00000458793 62 ntBASIC-0.57□□□□□ -2.5
SLC6A1P30531 RNU7-48P-201ENST00000458875 63 ntBASIC-0.57□□□□□ -2.5
SLC6A1P30531 RNU7-13P-201ENST00000516413 62 ntBASIC-0.57□□□□□ -2.5
SLC6A1P30531 MIR4263-201ENST00000584745 83 ntBASIC-0.57□□□□□ -2.5
SLC6A1P30531 AC108676.2-201ENST00000605225 163 ntBASIC-0.57□□□□□ -2.5
SLC6A1P30531 MIR548AZ-201ENST00000616567 95 ntBASIC-0.57□□□□□ -2.5
SLC6A1P30531 AC134503.1-201ENST00000633048 54 ntBASIC-0.57□□□□□ -2.5
SLC6A1P30531 Y_RNA.138-201ENST00000363462 102 ntBASIC-0.58□□□□□ -2.5
SLC6A1P30531 Y_RNA.357-201ENST00000365487 109 ntBASIC-0.58□□□□□ -2.5
SLC6A1P30531 Y_RNA.518-201ENST00000384552 113 ntBASIC-0.58□□□□□ -2.5
SLC6A1P30531 MIR206-201ENST00000384872 86 ntBASIC-0.58□□□□□ -2.5
SLC6A1P30531 MIR519A1-201ENST00000385257 85 ntBASIC-0.58□□□□□ -2.5
SLC6A1P30531 RNU6-1307P-201ENST00000391012 103 ntBASIC-0.58□□□□□ -2.5
SLC6A1P30531 MIR548P-201ENST00000408336 84 ntBASIC-0.58□□□□□ -2.5
SLC6A1P30531 MTND5P40-201ENST00000559945 246 ntBASIC-0.58□□□□□ -2.5
SLC6A1P30531 MIR4643-201ENST00000577473 78 ntBASIC-0.58□□□□□ -2.5
SLC6A1P30531 MIR4473-201ENST00000583731 91 ntBASIC-0.58□□□□□ -2.5
SLC6A1P30531 AL590491.3-201ENST00000610731 82 ntBASIC-0.58□□□□□ -2.5
SLC6A1P30531 CCDC7-215ENST00000639629 4158 ntAPPRIS ALT2 TSL 5 BASIC-0.59□□□□□ -2.5
SLC6A1P30531 SNORD114-11-201ENST00000363738 75 ntBASIC-0.59□□□□□ -2.5
SLC6A1P30531 RNA5SP368-201ENST00000364298 116 ntBASIC-0.59□□□□□ -2.5
SLC6A1P30531 RNU1-141P-201ENST00000364623 158 ntBASIC-0.59□□□□□ -2.5
SLC6A1P30531 RNU6-1109P-201ENST00000391187 107 ntBASIC-0.59□□□□□ -2.5
SLC6A1P30531 SNORD63B-201ENST00000411005 70 ntBASIC-0.59□□□□□ -2.5
SLC6A1P30531 Y_RNA.809-201ENST00000516058 95 ntBASIC-0.59□□□□□ -2.5
SLC6A1P30531 RNY3P16-201ENST00000516338 101 ntBASIC-0.59□□□□□ -2.5
SLC6A1P30531 RNA5SP476-201ENST00000516613 103 ntBASIC-0.59□□□□□ -2.5
SLC6A1P30531 RNU7-188P-201ENST00000517063 64 ntBASIC-0.59□□□□□ -2.5
SLC6A1P30531 RNU2-4P-201ENST00000606190 192 ntBASIC-0.59□□□□□ -2.5
SLC6A1P30531 Y_RNA.512-201ENST00000384518 102 ntBASIC-0.6□□□□□ -2.51
SLC6A1P30531 SNORA32.3-201ENST00000384772 121 ntBASIC-0.6□□□□□ -2.51
SLC6A1P30531 MIR548I2-201ENST00000408348 149 ntBASIC-0.6□□□□□ -2.51
SLC6A1P30531 RNU4-69P-201ENST00000410677 143 ntBASIC-0.6□□□□□ -2.51
SLC6A1P30531 RNU7-74P-201ENST00000459104 62 ntBASIC-0.6□□□□□ -2.51
SLC6A1P30531 AC074198.2-201ENST00000508153 258 ntBASIC-0.6□□□□□ -2.51
SLC6A1P30531 MIR4801-201ENST00000582704 82 ntBASIC-0.6□□□□□ -2.51
SLC6A1P30531 FTX_2.1-201ENST00000618816 94 ntBASIC-0.6□□□□□ -2.51
SLC6A1P30531 AC108866.1-201ENST00000503073 2339 ntTSL 5 BASIC-0.61□□□□□ -2.51
SLC6A1P30531 Y_RNA.76-201ENST00000362931 109 ntBASIC-0.61□□□□□ -2.51
SLC6A1P30531 RNU6-1201P-201ENST00000384227 107 ntBASIC-0.61□□□□□ -2.51
SLC6A1P30531 RNU6-524P-201ENST00000384270 107 ntBASIC-0.61□□□□□ -2.51
SLC6A1P30531 Y_RNA.562-201ENST00000384695 113 ntBASIC-0.61□□□□□ -2.51
SLC6A1P30531 MIR224-201ENST00000384889 81 ntBASIC-0.61□□□□□ -2.51
SLC6A1P30531 RNU7-123P-201ENST00000515911 60 ntBASIC-0.61□□□□□ -2.51
SLC6A1P30531 Y_RNA.797-201ENST00000515977 94 ntBASIC-0.61□□□□□ -2.51
SLC6A1P30531 RNU6-240P-201ENST00000516098 97 ntBASIC-0.61□□□□□ -2.51
SLC6A1P30531 MIR548AG2-201ENST00000581228 64 ntBASIC-0.61□□□□□ -2.51
SLC6A1P30531 MIR3171-201ENST00000584270 74 ntBASIC-0.61□□□□□ -2.51
SLC6A1P30531 MTRNR2L2-201ENST00000604882 87 ntBASIC-0.61□□□□□ -2.51
SLC6A1P30531 AP001362.1-201ENST00000625165 124 ntBASIC-0.61□□□□□ -2.51
SLC6A1P30531 RNU6-1260P-201ENST00000362944 107 ntBASIC-0.62□□□□□ -2.51
SLC6A1P30531 Y_RNA.98-201ENST00000363109 102 ntBASIC-0.62□□□□□ -2.51
Retrieved 100 of 98,524 protein–RNA pairs in 181 ms