Protein–RNA interactions for Protein: P28827

PTPRM, Receptor-type tyrosine-protein phosphatase mu, humanhuman

Predictions only

Length 1,452 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRMP28827 Y_RNA.190-201ENST00000363964 101 ntBASIC-1.84□□□□□ -2.7
PTPRMP28827 RNU6-312P-201ENST00000364629 107 ntBASIC-1.84□□□□□ -2.7
PTPRMP28827 Y_RNA.403-201ENST00000383977 101 ntBASIC-1.84□□□□□ -2.7
PTPRMP28827 Y_RNA.404-201ENST00000383978 102 ntBASIC-1.84□□□□□ -2.7
PTPRMP28827 RNU6-484P-201ENST00000384016 107 ntBASIC-1.84□□□□□ -2.7
PTPRMP28827 Evf-2_5p.1-201ENST00000614213 142 ntBASIC-1.84□□□□□ -2.7
PTPRMP28827 AC133104.2-201ENST00000615272 193 ntBASIC-1.84□□□□□ -2.7
PTPRMP28827 U2.1-201ENST00000618978 145 ntBASIC-1.84□□□□□ -2.7
PTPRMP28827 AP001362.1-201ENST00000625165 124 ntBASIC-1.84□□□□□ -2.7
PTPRMP28827 RNU6-228P-201ENST00000362700 106 ntBASIC-1.85□□□□□ -2.71
PTPRMP28827 Y_RNA.214-201ENST00000364201 112 ntBASIC-1.85□□□□□ -2.71
PTPRMP28827 Y_RNA.244-201ENST00000364484 109 ntBASIC-1.85□□□□□ -2.71
PTPRMP28827 Y_RNA.482-201ENST00000384377 111 ntBASIC-1.85□□□□□ -2.71
PTPRMP28827 MIR628-201ENST00000385229 95 ntBASIC-1.85□□□□□ -2.71
PTPRMP28827 RPS3AP52-201ENST00000435639 297 ntBASIC-1.85□□□□□ -2.71
PTPRMP28827 AC019235.1-201ENST00000503847 207 ntBASIC-1.85□□□□□ -2.71
PTPRMP28827 AC007485.1-201ENST00000616755 206 ntBASIC-1.85□□□□□ -2.71
PTPRMP28827 MIR6818-201ENST00000621576 65 ntBASIC-1.85□□□□□ -2.71
PTPRMP28827 MTND3P10-201ENST00000450967 341 ntBASIC-1.86□□□□□ -2.71
PTPRMP28827 RNU4ATAC7P-201ENST00000516280 125 ntBASIC-1.86□□□□□ -2.71
PTPRMP28827 RNU6-1314P-201ENST00000517139 104 ntBASIC-1.86□□□□□ -2.71
PTPRMP28827 AL445567.1-201ENST00000439121 144 ntBASIC-1.87□□□□□ -2.71
PTPRMP28827 U4.1-201ENST00000620349 87 ntBASIC-1.87□□□□□ -2.71
PTPRMP28827 AL359880.1-201ENST00000621879 266 ntBASIC-1.87□□□□□ -2.71
PTPRMP28827 AC091912.2-201ENST00000624798 167 ntBASIC-1.87□□□□□ -2.71
PTPRMP28827 Y_RNA.23-201ENST00000362496 106 ntBASIC-1.88□□□□□ -2.71
PTPRMP28827 RNU6-451P-201ENST00000362921 107 ntBASIC-1.88□□□□□ -2.71
PTPRMP28827 Y_RNA.207-201ENST00000364142 106 ntBASIC-1.88□□□□□ -2.71
PTPRMP28827 Y_RNA.380-201ENST00000365663 111 ntBASIC-1.88□□□□□ -2.71
PTPRMP28827 Y_RNA.531-201ENST00000384589 121 ntBASIC-1.88□□□□□ -2.71
PTPRMP28827 MTND1P34-201ENST00000438556 671 ntBASIC-1.88□□□□□ -2.71
PTPRMP28827 AC092755.1-201ENST00000441746 97 ntTSL 3 BASIC-1.88□□□□□ -2.71
PTPRMP28827 RNU6-118P-201ENST00000516552 102 ntBASIC-1.88□□□□□ -2.71
PTPRMP28827 SNORD113-5-201ENST00000607261 78 ntBASIC-1.88□□□□□ -2.71
PTPRMP28827 DLEU2_1.1-201ENST00000612089 120 ntBASIC-1.88□□□□□ -2.71
PTPRMP28827 DLEU2_1.2-201ENST00000614667 120 ntBASIC-1.88□□□□□ -2.71
PTPRMP28827 AC090617.10-201ENST00000624308 134 ntBASIC-1.88□□□□□ -2.71
PTPRMP28827 RNU6-1233P-201ENST00000362922 102 ntBASIC-1.88□□□□□ -2.71
PTPRMP28827 Y_RNA.127-201ENST00000363386 109 ntBASIC-1.88□□□□□ -2.71
PTPRMP28827 RNY1P6-201ENST00000384193 109 ntBASIC-1.88□□□□□ -2.71
PTPRMP28827 RNU6-592P-201ENST00000411333 103 ntBASIC-1.88□□□□□ -2.71
PTPRMP28827 RNU6ATAC32P-201ENST00000516026 76 ntBASIC-1.88□□□□□ -2.71
PTPRMP28827 MIR548AE2-201ENST00000583456 67 ntBASIC-1.88□□□□□ -2.71
PTPRMP28827 AC006006.1-201ENST00000603082 144 ntBASIC-1.88□□□□□ -2.71
PTPRMP28827 Y_RNA.328-201ENST00000365208 113 ntBASIC-1.89□□□□□ -2.71
PTPRMP28827 MIR516A2-201ENST00000384888 90 ntBASIC-1.89□□□□□ -2.71
PTPRMP28827 MIR516A1-201ENST00000385033 90 ntBASIC-1.89□□□□□ -2.71
PTPRMP28827 PMCHL1-202ENST00000423102 261 ntBASIC-1.89□□□□□ -2.71
PTPRMP28827 RNU6-956P-201ENST00000458868 103 ntBASIC-1.89□□□□□ -2.71
PTPRMP28827 RNU6-1057P-201ENST00000517162 102 ntBASIC-1.89□□□□□ -2.71
PTPRMP28827 IGHVIII-67-2-201ENST00000519849 88 ntBASIC-1.89□□□□□ -2.71
PTPRMP28827 C8orf59P2-201ENST00000603441 271 ntBASIC-1.89□□□□□ -2.71
PTPRMP28827 MIR548O2-201ENST00000616090 70 ntBASIC-1.89□□□□□ -2.71
PTPRMP28827 Y_RNA.448-201ENST00000384185 108 ntBASIC-1.9□□□□□ -2.71
PTPRMP28827 RNU6-1042P-201ENST00000384204 107 ntBASIC-1.9□□□□□ -2.71
PTPRMP28827 RNU6-466P-201ENST00000391224 103 ntBASIC-1.9□□□□□ -2.71
PTPRMP28827 RNU6-507P-201ENST00000516045 100 ntBASIC-1.9□□□□□ -2.71
PTPRMP28827 Y_RNA.691-201ENST00000516611 103 ntBASIC-1.9□□□□□ -2.71
PTPRMP28827 AL365205.2-201ENST00000594586 68 ntBASIC-1.9□□□□□ -2.71
PTPRMP28827 AC024614.3-201ENST00000637860 256 ntBASIC-1.9□□□□□ -2.71
PTPRMP28827 Y_RNA.299-201ENST00000364973 94 ntBASIC-1.91□□□□□ -2.72
PTPRMP28827 MIR206-201ENST00000384872 86 ntBASIC-1.91□□□□□ -2.72
PTPRMP28827 MIR548E-201ENST00000408287 88 ntBASIC-1.91□□□□□ -2.72
PTPRMP28827 Y_RNA.704-201ENST00000516851 102 ntBASIC-1.91□□□□□ -2.72
PTPRMP28827 Y_RNA.713-201ENST00000517013 96 ntBASIC-1.91□□□□□ -2.72
PTPRMP28827 AL050303.3-201ENST00000613704 284 ntBASIC-1.91□□□□□ -2.72
PTPRMP28827 MIR1321-201ENST00000637766 79 ntBASIC-1.91□□□□□ -2.72
PTPRMP28827 Y_RNA.424-201ENST00000384063 103 ntBASIC-1.92□□□□□ -2.72
PTPRMP28827 AC108019.1-201ENST00000512540 175 ntBASIC-1.92□□□□□ -2.72
PTPRMP28827 RNU6-980P-201ENST00000516925 103 ntBASIC-1.92□□□□□ -2.72
PTPRMP28827 RNU6-850P-201ENST00000516934 103 ntBASIC-1.92□□□□□ -2.72
PTPRMP28827 MIR6773-201ENST00000612812 74 ntBASIC-1.92□□□□□ -2.72
PTPRMP28827 MIR6874-201ENST00000635894 71 ntBASIC-1.92□□□□□ -2.72
PTPRMP28827 Y_RNA.10-201ENST00000362371 110 ntBASIC-1.93□□□□□ -2.72
PTPRMP28827 Y_RNA.24-201ENST00000362508 103 ntBASIC-1.93□□□□□ -2.72
PTPRMP28827 RNY1P11-201ENST00000363759 113 ntBASIC-1.93□□□□□ -2.72
PTPRMP28827 Y_RNA.222-201ENST00000364264 102 ntBASIC-1.93□□□□□ -2.72
PTPRMP28827 RNU6-728P-201ENST00000365375 104 ntBASIC-1.93□□□□□ -2.72
PTPRMP28827 RNU6-1254P-201ENST00000391266 104 ntBASIC-1.93□□□□□ -2.72
PTPRMP28827 RNU2-51P-201ENST00000410708 197 ntBASIC-1.93□□□□□ -2.72
PTPRMP28827 MRPS35P2-201ENST00000508242 191 ntBASIC-1.93□□□□□ -2.72
PTPRMP28827 Y_RNA.695-201ENST00000516715 107 ntBASIC-1.93□□□□□ -2.72
PTPRMP28827 SCARNA15-202ENST00000516881 127 ntBASIC-1.93□□□□□ -2.72
PTPRMP28827 Y_RNA.239-201ENST00000364444 113 ntBASIC-1.94□□□□□ -2.72
PTPRMP28827 SNORD115-23-201ENST00000364461 82 ntBASIC-1.94□□□□□ -2.72
PTPRMP28827 Y_RNA.622-201ENST00000411091 108 ntBASIC-1.94□□□□□ -2.72
PTPRMP28827 RNU4-61P-201ENST00000411243 107 ntBASIC-1.94□□□□□ -2.72
PTPRMP28827 VN1R91P-201ENST00000594377 169 ntBASIC-1.94□□□□□ -2.72
PTPRMP28827 MTND5P26-201ENST00000426018 1752 ntBASIC-1.94□□□□□ -2.72
PTPRMP28827 Y_RNA.199-201ENST00000364014 102 ntBASIC-1.94□□□□□ -2.72
PTPRMP28827 RNY3P11-201ENST00000364153 102 ntBASIC-1.94□□□□□ -2.72
PTPRMP28827 Y_RNA.314-201ENST00000365114 102 ntBASIC-1.94□□□□□ -2.72
PTPRMP28827 Y_RNA.353-201ENST00000365440 108 ntBASIC-1.94□□□□□ -2.72
PTPRMP28827 RNU6-937P-201ENST00000384325 106 ntBASIC-1.94□□□□□ -2.72
PTPRMP28827 Y_RNA.526-201ENST00000384572 110 ntBASIC-1.94□□□□□ -2.72
PTPRMP28827 MIR487B-201ENST00000385021 84 ntBASIC-1.94□□□□□ -2.72
PTPRMP28827 RNU6-243P-201ENST00000391140 107 ntBASIC-1.94□□□□□ -2.72
PTPRMP28827 SNORA79-201ENST00000408376 140 ntBASIC-1.94□□□□□ -2.72
PTPRMP28827 AC107399.1-201ENST00000451226 265 ntBASIC-1.94□□□□□ -2.72
PTPRMP28827 TRDV1-202ENST00000621643 102 ntBASIC-1.94□□□□□ -2.72
Retrieved 100 of 98,524 protein–RNA pairs in 222.9 ms