Protein–RNA interactions for Protein: P26640

VARS, Valine--tRNA ligase, humanhuman

Known RBP Predictions only

Length 1,264 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VARSP26640 Y_RNA.588-201ENST00000391254 102 ntBASIC2.49□□□□□ -2.01
VARSP26640 JTBP1-201ENST00000441314 247 ntBASIC2.49□□□□□ -2.01
VARSP26640 snoU13.25-201ENST00000458945 104 ntBASIC2.49□□□□□ -2.01
VARSP26640 AC008413.1-201ENST00000511864 177 ntBASIC2.49□□□□□ -2.01
VARSP26640 MIR6895-201ENST00000613497 78 ntBASIC2.49□□□□□ -2.01
VARSP26640 NEAT1_2.1-201ENST00000620525 105 ntBASIC2.49□□□□□ -2.01
VARSP26640 MIR7843-201ENST00000622274 79 ntBASIC2.49□□□□□ -2.01
VARSP26640 WARS-244ENST00000627608 123 ntTSL 5 BASIC2.49□□□□□ -2.01
VARSP26640 MIR6516-201ENST00000630554 81 ntBASIC2.49□□□□□ -2.01
VARSP26640 DENND4A-202ENST00000443035 8665 ntTSL 1 (best) BASIC2.49□□□□□ -2.01
VARSP26640 FGF7-201ENST00000267843 5467 ntAPPRIS P1 TSL 1 (best) BASIC2.48□□□□□ -2.01
VARSP26640 LIFR-201ENST00000263409 10089 ntAPPRIS P1 TSL 1 (best) BASIC2.48□□□□□ -2.01
VARSP26640 RNU6-439P-201ENST00000384188 106 ntBASIC2.48□□□□□ -2.01
VARSP26640 RNU7-195P-201ENST00000458793 62 ntBASIC2.48□□□□□ -2.01
VARSP26640 RNA5SP282-201ENST00000516355 108 ntBASIC2.48□□□□□ -2.01
VARSP26640 MIR4287-201ENST00000579398 78 ntBASIC2.48□□□□□ -2.01
VARSP26640 GHRLOS.1-201ENST00000610995 70 ntBASIC2.48□□□□□ -2.01
VARSP26640 FSIP2-206ENST00000611759 3882 ntAPPRIS ALT2 TSL 5 BASIC2.47□□□□□ -2.01
VARSP26640 Y_RNA.205-201ENST00000364128 113 ntBASIC2.47□□□□□ -2.01
VARSP26640 SNORA16B-201ENST00000364674 135 ntBASIC2.47□□□□□ -2.01
VARSP26640 RNU6-1051P-201ENST00000365471 102 ntBASIC2.47□□□□□ -2.01
VARSP26640 RNU6-800P-201ENST00000384473 103 ntBASIC2.47□□□□□ -2.01
VARSP26640 U8.13-201ENST00000390842 128 ntBASIC2.47□□□□□ -2.01
VARSP26640 SNORD100-201ENST00000408573 76 ntBASIC2.47□□□□□ -2.01
VARSP26640 RNA5SP95-201ENST00000410319 137 ntBASIC2.47□□□□□ -2.01
VARSP26640 AC079804.2-201ENST00000490376 200 ntBASIC2.47□□□□□ -2.01
VARSP26640 TRAJ51-201ENST00000504127 63 ntBASIC2.47□□□□□ -2.01
VARSP26640 TDRD15-202ENST00000622654 5805 ntAPPRIS P1 BASIC2.47□□□□□ -2.01
VARSP26640 ZMYM1-203ENST00000373330 4203 ntAPPRIS P1 TSL 1 (best) BASIC2.47□□□□□ -2.01
VARSP26640 SAMD9L-201ENST00000318238 7134 ntAPPRIS P1 TSL 1 (best) BASIC2.46□□□□□ -2.02
VARSP26640 MIR101-2-201ENST00000362195 79 ntBASIC2.46□□□□□ -2.02
VARSP26640 Y_RNA.371-201ENST00000365591 113 ntBASIC2.46□□□□□ -2.02
VARSP26640 Y_RNA.536-201ENST00000384621 113 ntBASIC2.46□□□□□ -2.02
VARSP26640 TRAJ53-201ENST00000390485 66 ntAPPRIS P1 BASIC2.46□□□□□ -2.02
VARSP26640 RNA5SP425-201ENST00000410336 112 ntBASIC2.46□□□□□ -2.02
VARSP26640 RNU1-41P-201ENST00000516161 162 ntBASIC2.46□□□□□ -2.02
VARSP26640 RNU1-48P-201ENST00000516400 162 ntBASIC2.46□□□□□ -2.02
VARSP26640 RNA5SP148-201ENST00000516527 94 ntBASIC2.46□□□□□ -2.02
VARSP26640 MIR4524B-201ENST00000581569 115 ntBASIC2.46□□□□□ -2.02
VARSP26640 U6.111-201ENST00000636093 83 ntBASIC2.46□□□□□ -2.02
VARSP26640 ZNF470-202ENST00000391709 6601 ntAPPRIS P1 TSL 5 BASIC2.46□□□□□ -2.02
VARSP26640 ZNF209P-201ENST00000593450 2304 ntBASIC2.45□□□□□ -2.02
VARSP26640 RNU6-330P-201ENST00000363015 107 ntBASIC2.45□□□□□ -2.02
VARSP26640 Y_RNA.207-201ENST00000364142 106 ntBASIC2.45□□□□□ -2.02
VARSP26640 RNU6-654P-201ENST00000364373 107 ntBASIC2.45□□□□□ -2.02
VARSP26640 RNU1-36P-201ENST00000365130 165 ntBASIC2.45□□□□□ -2.02
VARSP26640 SNORD115-31-201ENST00000365318 82 ntBASIC2.45□□□□□ -2.02
VARSP26640 RNA5SP212-201ENST00000391223 107 ntBASIC2.45□□□□□ -2.02
VARSP26640 AC013244.2-201ENST00000603396 103 ntBASIC2.45□□□□□ -2.02
VARSP26640 ZNF658B-202ENST00000615961 3375 ntBASIC2.44□□□□□ -2.02
VARSP26640 AC080100.1-201ENST00000624239 5356 ntBASIC2.44□□□□□ -2.02
VARSP26640 AGL-204ENST00000370161 6923 ntTSL 5 BASIC2.44□□□□□ -2.02
VARSP26640 RNA5SP276-201ENST00000362580 94 ntBASIC2.44□□□□□ -2.02
VARSP26640 Y_RNA.36-201ENST00000362602 112 ntBASIC2.44□□□□□ -2.02
VARSP26640 Y_RNA.239-201ENST00000364444 113 ntBASIC2.44□□□□□ -2.02
VARSP26640 MIR144-201ENST00000384886 86 ntBASIC2.44□□□□□ -2.02
VARSP26640 MIR17-201ENST00000385012 84 ntBASIC2.44□□□□□ -2.02
VARSP26640 RNU6-663P-201ENST00000391105 106 ntBASIC2.44□□□□□ -2.02
VARSP26640 MIR1185-1-201ENST00000408598 86 ntBASIC2.44□□□□□ -2.02
VARSP26640 AL606490.4-201ENST00000423117 127 ntBASIC2.44□□□□□ -2.02
VARSP26640 snoU13.15-201ENST00000459407 104 ntBASIC2.44□□□□□ -2.02
VARSP26640 RNU11-2P-201ENST00000516898 142 ntBASIC2.44□□□□□ -2.02
VARSP26640 TRDV1-202ENST00000621643 102 ntBASIC2.44□□□□□ -2.02
VARSP26640 THOC2-216ENST00000491737 4452 ntTSL 5 BASIC2.43□□□□□ -2.02
VARSP26640 Y_RNA.42-201ENST00000362660 108 ntBASIC2.43□□□□□ -2.02
VARSP26640 AL356320.1-201ENST00000429616 163 ntBASIC2.43□□□□□ -2.02
VARSP26640 MIR18B-201ENST00000454574 71 ntBASIC2.43□□□□□ -2.02
VARSP26640 AL133373.1-201ENST00000497098 94 ntBASIC2.43□□□□□ -2.02
VARSP26640 ZFAT-AS1_2.1-201ENST00000613742 201 ntBASIC2.43□□□□□ -2.02
VARSP26640 ZBBX-205ENST00000455345 3185 ntAPPRIS ALT2 TSL 1 (best) BASIC2.43□□□□□ -2.02
VARSP26640 MIR377-201ENST00000362145 69 ntBASIC2.42□□□□□ -2.02
VARSP26640 MIR103A2-201ENST00000362154 78 ntBASIC2.42□□□□□ -2.02
VARSP26640 RNU6-154P-201ENST00000384306 106 ntBASIC2.42□□□□□ -2.02
VARSP26640 MIR942-201ENST00000401111 86 ntBASIC2.42□□□□□ -2.02
VARSP26640 Y_RNA.809-201ENST00000516058 95 ntBASIC2.42□□□□□ -2.02
VARSP26640 RNA5SP320-201ENST00000516263 124 ntBASIC2.42□□□□□ -2.02
VARSP26640 AP003716.2-201ENST00000528260 108 ntBASIC2.42□□□□□ -2.02
VARSP26640 MIR548H5-201ENST00000580314 60 ntBASIC2.42□□□□□ -2.02
VARSP26640 CGGBP1-202ENST00000398392 5298 ntAPPRIS P1 BASIC2.42□□□□□ -2.02
VARSP26640 PRKD3-201ENST00000234179 5900 ntAPPRIS P1 TSL 1 (best) BASIC2.42□□□□□ -2.02
VARSP26640 RGPD1-204ENST00000559485 5247 ntAPPRIS P2 TSL 1 (best) BASIC2.41□□□□□ -2.02
VARSP26640 RNU6-340P-201ENST00000364005 107 ntBASIC2.41□□□□□ -2.02
VARSP26640 RNY4P3-201ENST00000365254 95 ntBASIC2.41□□□□□ -2.02
VARSP26640 RNU6-291P-201ENST00000384720 107 ntBASIC2.41□□□□□ -2.02
VARSP26640 MIR27B-201ENST00000385129 97 ntBASIC2.41□□□□□ -2.02
VARSP26640 RPS27P16-201ENST00000425758 201 ntBASIC2.41□□□□□ -2.02
VARSP26640 RNU6-250P-201ENST00000516958 103 ntBASIC2.41□□□□□ -2.02
VARSP26640 MIR5694-201ENST00000581190 76 ntBASIC2.41□□□□□ -2.02
VARSP26640 RNU7-10P-201ENST00000607194 63 ntBASIC2.41□□□□□ -2.02
VARSP26640 RNU6ATAC37P-201ENST00000408328 131 ntBASIC2.4□□□□□ -2.03
VARSP26640 RNU7-156P-201ENST00000517214 74 ntBASIC2.4□□□□□ -2.03
VARSP26640 MIR3140-201ENST00000583685 90 ntBASIC2.4□□□□□ -2.03
VARSP26640 MIR6840-201ENST00000611937 71 ntBASIC2.4□□□□□ -2.03
VARSP26640 AL773524.1-201ENST00000614065 229 ntBASIC2.4□□□□□ -2.03
VARSP26640 EYS-211ENST00000503581 10589 ntAPPRIS P3 TSL 5 BASIC2.4□□□□□ -2.03
VARSP26640 AL596028.1-201ENST00000326971 197 ntBASIC2.39□□□□□ -2.03
VARSP26640 RNU6-664P-201ENST00000362381 107 ntBASIC2.39□□□□□ -2.03
VARSP26640 RNA5SP264-201ENST00000363115 107 ntBASIC2.39□□□□□ -2.03
VARSP26640 RNA5SP456-201ENST00000364002 114 ntBASIC2.39□□□□□ -2.03
VARSP26640 RNU4-53P-201ENST00000410828 140 ntBASIC2.39□□□□□ -2.03
Retrieved 100 of 98,524 protein–RNA pairs in 199.9 ms