Protein–RNA interactions for Protein: P22090

RPS4Y1, 40S ribosomal protein S4, Y isoform 1, humanhuman

Known RBP Predictions only

Length 263 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPS4Y1P22090 RNU7-106P-201ENST00000459514 67 ntBASIC-1.13□□□□□ -2.59
RPS4Y1P22090 RNU4ATAC4P-201ENST00000516307 126 ntBASIC-1.13□□□□□ -2.59
RPS4Y1P22090 AC145423.2-201ENST00000610631 239 ntBASIC-1.13□□□□□ -2.59
RPS4Y1P22090 Y_RNA.5-201ENST00000362334 102 ntBASIC-1.14□□□□□ -2.59
RPS4Y1P22090 RNU6-502P-201ENST00000362419 108 ntBASIC-1.14□□□□□ -2.59
RPS4Y1P22090 MIR624-201ENST00000385217 97 ntBASIC-1.14□□□□□ -2.59
RPS4Y1P22090 AC244090.1-201ENST00000441884 93 ntBASIC-1.14□□□□□ -2.59
RPS4Y1P22090 snoU13.13-201ENST00000458842 104 ntBASIC-1.14□□□□□ -2.59
RPS4Y1P22090 RNU7-152P-201ENST00000458982 64 ntBASIC-1.14□□□□□ -2.59
RPS4Y1P22090 snoU13.11-201ENST00000459219 104 ntBASIC-1.14□□□□□ -2.59
RPS4Y1P22090 AC112487.2-201ENST00000637950 304 ntBASIC-1.14□□□□□ -2.59
RPS4Y1P22090 Y_RNA.98-201ENST00000363109 102 ntBASIC-1.15□□□□□ -2.59
RPS4Y1P22090 RNU6-978P-201ENST00000364371 103 ntBASIC-1.15□□□□□ -2.59
RPS4Y1P22090 RNU6-1062P-201ENST00000383908 107 ntBASIC-1.15□□□□□ -2.59
RPS4Y1P22090 Y_RNA.448-201ENST00000384185 108 ntBASIC-1.15□□□□□ -2.59
RPS4Y1P22090 MIR206-201ENST00000384872 86 ntBASIC-1.15□□□□□ -2.59
RPS4Y1P22090 SNORA49-201ENST00000386157 136 ntBASIC-1.15□□□□□ -2.59
RPS4Y1P22090 SNORA79-201ENST00000408376 140 ntBASIC-1.15□□□□□ -2.59
RPS4Y1P22090 RNU4-43P-201ENST00000410628 137 ntBASIC-1.15□□□□□ -2.59
RPS4Y1P22090 SCARNA21.1-201ENST00000515996 128 ntBASIC-1.15□□□□□ -2.59
RPS4Y1P22090 RNU6-1236P-201ENST00000517080 99 ntBASIC-1.15□□□□□ -2.59
RPS4Y1P22090 AC037487.3-201ENST00000606668 112 ntBASIC-1.15□□□□□ -2.59
RPS4Y1P22090 AP001362.1-201ENST00000625165 124 ntBASIC-1.15□□□□□ -2.59
RPS4Y1P22090 MTND5P18-201ENST00000445624 1801 ntBASIC-1.15□□□□□ -2.59
RPS4Y1P22090 Y_RNA.127-201ENST00000363386 109 ntBASIC-1.16□□□□□ -2.6
RPS4Y1P22090 Y_RNA.154-201ENST00000363624 102 ntBASIC-1.16□□□□□ -2.6
RPS4Y1P22090 Y_RNA.160-201ENST00000363677 92 ntBASIC-1.16□□□□□ -2.6
RPS4Y1P22090 Y_RNA.187-201ENST00000363918 113 ntBASIC-1.16□□□□□ -2.6
RPS4Y1P22090 Y_RNA.387-201ENST00000383918 102 ntBASIC-1.16□□□□□ -2.6
RPS4Y1P22090 SNORA51.5-201ENST00000384126 131 ntBASIC-1.16□□□□□ -2.6
RPS4Y1P22090 SNORD116-2-201ENST00000384274 95 ntBASIC-1.16□□□□□ -2.6
RPS4Y1P22090 SNORD116-6-201ENST00000384711 96 ntBASIC-1.16□□□□□ -2.6
RPS4Y1P22090 RNU6-121P-201ENST00000410525 99 ntBASIC-1.16□□□□□ -2.6
RPS4Y1P22090 uc_338.19-201ENST00000616808 99 ntBASIC-1.16□□□□□ -2.6
RPS4Y1P22090 Y_RNA.555-201ENST00000384673 110 ntBASIC-1.17□□□□□ -2.6
RPS4Y1P22090 MIR652-201ENST00000385278 98 ntBASIC-1.17□□□□□ -2.6
RPS4Y1P22090 RNU6-1307P-201ENST00000391012 103 ntBASIC-1.17□□□□□ -2.6
RPS4Y1P22090 AC008883.1-201ENST00000506562 193 ntTSL 3 BASIC-1.17□□□□□ -2.6
RPS4Y1P22090 RNU2-35P-201ENST00000516446 142 ntBASIC-1.17□□□□□ -2.6
RPS4Y1P22090 SNORD116-25-201ENST00000516517 92 ntBASIC-1.17□□□□□ -2.6
RPS4Y1P22090 AC007012.1-201ENST00000567192 175 ntBASIC-1.17□□□□□ -2.6
RPS4Y1P22090 AC093783.1-201ENST00000612976 329 ntBASIC-1.17□□□□□ -2.6
RPS4Y1P22090 SNORD115-25-201ENST00000362619 82 ntBASIC-1.18□□□□□ -2.6
RPS4Y1P22090 snoU2_19.2-201ENST00000363024 80 ntBASIC-1.18□□□□□ -2.6
RPS4Y1P22090 RNU6-728P-201ENST00000365375 104 ntBASIC-1.18□□□□□ -2.6
RPS4Y1P22090 RNU6-571P-201ENST00000384128 107 ntBASIC-1.18□□□□□ -2.6
RPS4Y1P22090 MIR1302-11-201ENST00000408051 138 ntBASIC-1.18□□□□□ -2.6
RPS4Y1P22090 MIR1302-9-201ENST00000408365 138 ntBASIC-1.18□□□□□ -2.6
RPS4Y1P22090 MIR1302-10-201ENST00000408734 138 ntBASIC-1.18□□□□□ -2.6
RPS4Y1P22090 RNU6-277P-201ENST00000516272 106 ntBASIC-1.18□□□□□ -2.6
RPS4Y1P22090 AC026407.1-201ENST00000518369 204 ntBASIC-1.18□□□□□ -2.6
RPS4Y1P22090 MRPS18CP4-201ENST00000535821 231 ntBASIC-1.18□□□□□ -2.6
RPS4Y1P22090 MIR3179-1-201ENST00000578940 84 ntBASIC-1.18□□□□□ -2.6
RPS4Y1P22090 MIR3179-2-201ENST00000579107 84 ntBASIC-1.18□□□□□ -2.6
RPS4Y1P22090 MIR3179-3-201ENST00000579566 84 ntBASIC-1.18□□□□□ -2.6
RPS4Y1P22090 MIR1302-2-201ENST00000607096 138 ntBASIC-1.18□□□□□ -2.6
RPS4Y1P22090 MIR3179-4-201ENST00000617599 84 ntBASIC-1.18□□□□□ -2.6
RPS4Y1P22090 U4.1-201ENST00000620349 87 ntBASIC-1.18□□□□□ -2.6
RPS4Y1P22090 MT-ATP8-201ENST00000361851 207 ntAPPRIS P1 BASIC-1.19□□□□□ -2.6
RPS4Y1P22090 SNORA63.7-201ENST00000365579 123 ntBASIC-1.19□□□□□ -2.6
RPS4Y1P22090 MIR518B-201ENST00000385127 83 ntBASIC-1.19□□□□□ -2.6
RPS4Y1P22090 RNU6-287P-201ENST00000516230 98 ntBASIC-1.19□□□□□ -2.6
RPS4Y1P22090 RNA5SP67-201ENST00000516422 131 ntBASIC-1.19□□□□□ -2.6
RPS4Y1P22090 MIR4499-201ENST00000584834 69 ntBASIC-1.19□□□□□ -2.6
RPS4Y1P22090 Y_RNA.357-201ENST00000365487 109 ntBASIC-1.2□□□□□ -2.6
RPS4Y1P22090 RNU6-1289P-201ENST00000384431 106 ntBASIC-1.2□□□□□ -2.6
RPS4Y1P22090 RNU6-1215P-201ENST00000384441 102 ntBASIC-1.2□□□□□ -2.6
RPS4Y1P22090 MIR517B-201ENST00000385102 67 ntBASIC-1.2□□□□□ -2.6
RPS4Y1P22090 AC016907.1-201ENST00000419483 435 ntBASIC-1.2□□□□□ -2.6
RPS4Y1P22090 SCARNA17-201ENST00000516183 144 ntBASIC-1.2□□□□□ -2.6
RPS4Y1P22090 SNORA40.17-201ENST00000517256 115 ntBASIC-1.2□□□□□ -2.6
RPS4Y1P22090 AC090574.1-201ENST00000623186 233 ntBASIC-1.2□□□□□ -2.6
RPS4Y1P22090 Y_RNA.31-201ENST00000362574 102 ntBASIC-1.21□□□□□ -2.6
RPS4Y1P22090 Y_RNA.328-201ENST00000365208 113 ntBASIC-1.21□□□□□ -2.6
RPS4Y1P22090 Y_RNA.785-201ENST00000384290 109 ntBASIC-1.21□□□□□ -2.6
RPS4Y1P22090 Y_RNA.568-201ENST00000384742 113 ntBASIC-1.21□□□□□ -2.6
RPS4Y1P22090 Y_RNA.571-201ENST00000384753 98 ntBASIC-1.21□□□□□ -2.6
RPS4Y1P22090 RNU6-381P-201ENST00000391259 108 ntBASIC-1.21□□□□□ -2.6
RPS4Y1P22090 RNU4-69P-201ENST00000410677 143 ntBASIC-1.21□□□□□ -2.6
RPS4Y1P22090 RNU6-976P-201ENST00000516086 111 ntBASIC-1.21□□□□□ -2.6
RPS4Y1P22090 SNORD22.1-201ENST00000516331 125 ntBASIC-1.21□□□□□ -2.6
RPS4Y1P22090 AP005120.1-201ENST00000579321 352 ntTSL 3 BASIC-1.21□□□□□ -2.6
RPS4Y1P22090 AC080013.6-201ENST00000606185 215 ntBASIC-1.21□□□□□ -2.6
RPS4Y1P22090 Y_RNA.35-201ENST00000362601 101 ntBASIC-1.22□□□□□ -2.6
RPS4Y1P22090 Y_RNA.64-201ENST00000362845 102 ntBASIC-1.22□□□□□ -2.6
RPS4Y1P22090 RNU6-973P-201ENST00000364690 107 ntBASIC-1.22□□□□□ -2.6
RPS4Y1P22090 Y_RNA.275-201ENST00000364726 110 ntBASIC-1.22□□□□□ -2.6
RPS4Y1P22090 Y_RNA.342-201ENST00000365352 113 ntBASIC-1.22□□□□□ -2.6
RPS4Y1P22090 RNU6-472P-201ENST00000384299 107 ntBASIC-1.22□□□□□ -2.6
RPS4Y1P22090 RNU6-274P-201ENST00000459566 107 ntBASIC-1.22□□□□□ -2.6
RPS4Y1P22090 RRM2B-207ENST00000519962 201 ntTSL 1 (best) BASIC-1.22□□□□□ -2.6
RPS4Y1P22090 RNU2-4P-201ENST00000606190 192 ntBASIC-1.22□□□□□ -2.6
RPS4Y1P22090 KCNQ1OT1_5.1-201ENST00000621902 226 ntBASIC-1.22□□□□□ -2.6
RPS4Y1P22090 Y_RNA.117-201ENST00000363294 101 ntBASIC-1.23□□□□□ -2.61
RPS4Y1P22090 Y_RNA.142-201ENST00000363491 102 ntBASIC-1.23□□□□□ -2.61
RPS4Y1P22090 Y_RNA.389-201ENST00000383924 113 ntBASIC-1.23□□□□□ -2.61
RPS4Y1P22090 RNU7-2P-201ENST00000516096 62 ntBASIC-1.23□□□□□ -2.61
RPS4Y1P22090 RNU6-850P-201ENST00000516934 103 ntBASIC-1.23□□□□□ -2.61
RPS4Y1P22090 TTC28-AS1_2.1-201ENST00000611117 157 ntBASIC-1.23□□□□□ -2.61
RPS4Y1P22090 MIR376B-201ENST00000614515 100 ntBASIC-1.23□□□□□ -2.61
Retrieved 100 of 98,524 protein–RNA pairs in 201.4 ms