Protein–RNA interactions for Protein: P20036

HLA-DPA1, HLA class II histocompatibility antigen, DP alpha 1 chain, humanhuman

Predictions only

Length 260 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPA1P20036 RNU6-923P-201ENST00000364753 107 ntBASIC-0.49□□□□□ -2.49
HLA-DPA1P20036 Y_RNA.521-201ENST00000384560 114 ntBASIC-0.49□□□□□ -2.49
HLA-DPA1P20036 SNORA75.1-201ENST00000391130 148 ntBASIC-0.49□□□□□ -2.49
HLA-DPA1P20036 MIR4802-201ENST00000581881 80 ntBASIC-0.49□□□□□ -2.49
HLA-DPA1P20036 CCDC7-215ENST00000639629 4158 ntAPPRIS ALT2 TSL 5 BASIC-0.5□□□□□ -2.49
HLA-DPA1P20036 RNU6-867P-201ENST00000364956 107 ntBASIC-0.5□□□□□ -2.49
HLA-DPA1P20036 Y_RNA.518-201ENST00000384552 113 ntBASIC-0.5□□□□□ -2.49
HLA-DPA1P20036 MTATP8P1-201ENST00000467115 207 ntBASIC-0.5□□□□□ -2.49
HLA-DPA1P20036 RNU6-320P-201ENST00000516511 106 ntBASIC-0.5□□□□□ -2.49
HLA-DPA1P20036 Y_RNA.185-201ENST00000363894 100 ntBASIC-0.51□□□□□ -2.49
HLA-DPA1P20036 RNU6-46P-201ENST00000383860 107 ntBASIC-0.51□□□□□ -2.49
HLA-DPA1P20036 RNU6-449P-201ENST00000383914 107 ntBASIC-0.51□□□□□ -2.49
HLA-DPA1P20036 Y_RNA.571-201ENST00000384753 98 ntBASIC-0.51□□□□□ -2.49
HLA-DPA1P20036 MIR599-201ENST00000385069 95 ntBASIC-0.51□□□□□ -2.49
HLA-DPA1P20036 MTCYBP6-201ENST00000441810 138 ntBASIC-0.51□□□□□ -2.49
HLA-DPA1P20036 MTND1P19-201ENST00000511780 315 ntBASIC-0.51□□□□□ -2.49
HLA-DPA1P20036 RNA5SP236-201ENST00000516169 116 ntBASIC-0.51□□□□□ -2.49
HLA-DPA1P20036 RNU2-35P-201ENST00000516446 142 ntBASIC-0.51□□□□□ -2.49
HLA-DPA1P20036 MIR4500-201ENST00000579472 76 ntBASIC-0.51□□□□□ -2.49
HLA-DPA1P20036 AC044792.1-201ENST00000593294 196 ntBASIC-0.51□□□□□ -2.49
HLA-DPA1P20036 MIR6514-201ENST00000622549 70 ntBASIC-0.51□□□□□ -2.49
HLA-DPA1P20036 Y_RNA.357-201ENST00000365487 109 ntBASIC-0.52□□□□□ -2.49
HLA-DPA1P20036 SNORD110-201ENST00000408189 75 ntBASIC-0.52□□□□□ -2.49
HLA-DPA1P20036 AC023051.1-201ENST00000414098 876 ntTSL 5 BASIC-0.52□□□□□ -2.49
HLA-DPA1P20036 AC006210.1-201ENST00000424882 111 ntBASIC-0.52□□□□□ -2.49
HLA-DPA1P20036 TRAJ51-201ENST00000504127 63 ntBASIC-0.52□□□□□ -2.49
HLA-DPA1P20036 MIR5589-201ENST00000579442 60 ntBASIC-0.52□□□□□ -2.49
HLA-DPA1P20036 AP001094.1-201ENST00000579805 193 ntBASIC-0.52□□□□□ -2.49
HLA-DPA1P20036 RNY4P28-201ENST00000365281 93 ntBASIC-0.53□□□□□ -2.49
HLA-DPA1P20036 RNU6-472P-201ENST00000384299 107 ntBASIC-0.53□□□□□ -2.49
HLA-DPA1P20036 Y_RNA.549-201ENST00000384657 102 ntBASIC-0.53□□□□□ -2.49
HLA-DPA1P20036 Y_RNA.701-201ENST00000516812 110 ntBASIC-0.53□□□□□ -2.49
HLA-DPA1P20036 MIR4645-201ENST00000583158 77 ntBASIC-0.53□□□□□ -2.49
HLA-DPA1P20036 AC011603.4-201ENST00000611325 277 ntBASIC-0.53□□□□□ -2.49
HLA-DPA1P20036 RNU6-509P-201ENST00000363519 107 ntBASIC-0.54□□□□□ -2.5
HLA-DPA1P20036 RNU6-275P-201ENST00000364910 107 ntBASIC-0.54□□□□□ -2.5
HLA-DPA1P20036 RNU6-1321P-201ENST00000390905 107 ntBASIC-0.54□□□□□ -2.5
HLA-DPA1P20036 MIR1912-201ENST00000410389 80 ntBASIC-0.54□□□□□ -2.5
HLA-DPA1P20036 Y_RNA.125-201ENST00000363371 111 ntBASIC-0.55□□□□□ -2.5
HLA-DPA1P20036 Y_RNA.574-201ENST00000384766 95 ntBASIC-0.55□□□□□ -2.5
HLA-DPA1P20036 AC097635.1-201ENST00000450678 155 ntBASIC-0.55□□□□□ -2.5
HLA-DPA1P20036 EBAG9-207ENST00000531677 777 ntTSL 1 (best) BASIC-0.55□□□□□ -2.5
HLA-DPA1P20036 CR383656.4-201ENST00000546909 122 ntBASIC-0.55□□□□□ -2.5
HLA-DPA1P20036 NAMPTP3-201ENST00000569273 224 ntBASIC-0.55□□□□□ -2.5
HLA-DPA1P20036 AC138907.4-201ENST00000570107 226 ntBASIC-0.55□□□□□ -2.5
HLA-DPA1P20036 MIR4636-201ENST00000582271 80 ntBASIC-0.55□□□□□ -2.5
HLA-DPA1P20036 AC084368.1-201ENST00000620935 65 ntBASIC-0.55□□□□□ -2.5
HLA-DPA1P20036 SNORD114-28-201ENST00000363610 72 ntBASIC-0.56□□□□□ -2.5
HLA-DPA1P20036 RNU4-69P-201ENST00000410677 143 ntBASIC-0.56□□□□□ -2.5
HLA-DPA1P20036 RNU7-48P-201ENST00000458875 63 ntBASIC-0.56□□□□□ -2.5
HLA-DPA1P20036 RNU6-240P-201ENST00000516098 97 ntBASIC-0.56□□□□□ -2.5
HLA-DPA1P20036 AC021443.1-201ENST00000604478 211 ntBASIC-0.56□□□□□ -2.5
HLA-DPA1P20036 RNA5SP275-201ENST00000363936 118 ntBASIC-0.57□□□□□ -2.5
HLA-DPA1P20036 Y_RNA.299-201ENST00000364973 94 ntBASIC-0.57□□□□□ -2.5
HLA-DPA1P20036 Y_RNA.422-201ENST00000384054 114 ntBASIC-0.57□□□□□ -2.5
HLA-DPA1P20036 RNA5SP300-201ENST00000391197 107 ntBASIC-0.57□□□□□ -2.5
HLA-DPA1P20036 MIR548H3-201ENST00000408771 118 ntBASIC-0.57□□□□□ -2.5
HLA-DPA1P20036 HMGN2P22-201ENST00000427588 175 ntBASIC-0.57□□□□□ -2.5
HLA-DPA1P20036 RNU7-164P-201ENST00000459221 62 ntBASIC-0.57□□□□□ -2.5
HLA-DPA1P20036 MIR1270-201ENST00000459320 83 ntBASIC-0.57□□□□□ -2.5
HLA-DPA1P20036 Y_RNA.720-201ENST00000517166 92 ntBASIC-0.57□□□□□ -2.5
HLA-DPA1P20036 IGHVII-40-1-201ENST00000517316 58 ntBASIC-0.57□□□□□ -2.5
HLA-DPA1P20036 MIR4308-201ENST00000580634 81 ntBASIC-0.57□□□□□ -2.5
HLA-DPA1P20036 MIR3666-201ENST00000607845 111 ntBASIC-0.57□□□□□ -2.5
HLA-DPA1P20036 Y_RNA.98-201ENST00000363109 102 ntBASIC-0.58□□□□□ -2.5
HLA-DPA1P20036 Y_RNA.170-201ENST00000363746 110 ntBASIC-0.58□□□□□ -2.5
HLA-DPA1P20036 Y_RNA.396-201ENST00000383949 103 ntBASIC-0.58□□□□□ -2.5
HLA-DPA1P20036 Y_RNA.448-201ENST00000384185 108 ntBASIC-0.58□□□□□ -2.5
HLA-DPA1P20036 AC096531.1-201ENST00000419107 107 ntBASIC-0.58□□□□□ -2.5
HLA-DPA1P20036 MTATP6P21-201ENST00000440681 189 ntBASIC-0.58□□□□□ -2.5
HLA-DPA1P20036 RNA5SP484-201ENST00000458857 111 ntBASIC-0.58□□□□□ -2.5
HLA-DPA1P20036 AP001180.6-201ENST00000584918 159 ntBASIC-0.58□□□□□ -2.5
HLA-DPA1P20036 CYP19A1-220ENST00000613097 123 ntTSL 5 BASIC-0.58□□□□□ -2.5
HLA-DPA1P20036 MIR206-201ENST00000384872 86 ntBASIC-0.59□□□□□ -2.5
HLA-DPA1P20036 MIR548I2-201ENST00000408348 149 ntBASIC-0.59□□□□□ -2.5
HLA-DPA1P20036 RNU2-38P-201ENST00000410856 79 ntBASIC-0.59□□□□□ -2.5
HLA-DPA1P20036 BX276092.1-201ENST00000427368 251 ntBASIC-0.59□□□□□ -2.5
HLA-DPA1P20036 DEFB131B-201ENST00000530210 213 ntAPPRIS P1 TSL 1 (best) BASIC-0.59□□□□□ -2.5
HLA-DPA1P20036 MIR148A-201ENST00000362215 68 ntBASIC-0.6□□□□□ -2.51
HLA-DPA1P20036 RNU6-818P-201ENST00000364837 108 ntBASIC-0.6□□□□□ -2.51
HLA-DPA1P20036 RNU6-768P-201ENST00000384683 107 ntBASIC-0.6□□□□□ -2.51
HLA-DPA1P20036 U6.106-201ENST00000636360 105 ntBASIC-0.6□□□□□ -2.51
HLA-DPA1P20036 RNU6-1082P-201ENST00000364574 107 ntBASIC-0.61□□□□□ -2.51
HLA-DPA1P20036 RNU6-865P-201ENST00000364772 107 ntBASIC-0.61□□□□□ -2.51
HLA-DPA1P20036 Y_RNA.323-201ENST00000365157 109 ntBASIC-0.61□□□□□ -2.51
HLA-DPA1P20036 SNORD49B-201ENST00000365172 72 ntBASIC-0.61□□□□□ -2.51
HLA-DPA1P20036 SNORD14C-201ENST00000365382 88 ntBASIC-0.61□□□□□ -2.51
HLA-DPA1P20036 RNU6-1227P-201ENST00000383981 107 ntBASIC-0.61□□□□□ -2.51
HLA-DPA1P20036 MIR516B1-201ENST00000385211 90 ntBASIC-0.61□□□□□ -2.51
HLA-DPA1P20036 SNORD77B-201ENST00000391112 67 ntBASIC-0.61□□□□□ -2.51
HLA-DPA1P20036 MIR876-201ENST00000401147 81 ntBASIC-0.61□□□□□ -2.51
HLA-DPA1P20036 Y_RNA.626-201ENST00000411288 95 ntBASIC-0.61□□□□□ -2.51
HLA-DPA1P20036 SNORA25.13-201ENST00000516395 103 ntBASIC-0.61□□□□□ -2.51
HLA-DPA1P20036 AP001362.1-201ENST00000625165 124 ntBASIC-0.61□□□□□ -2.51
HLA-DPA1P20036 Y_RNA.75-201ENST00000362927 97 ntBASIC-0.62□□□□□ -2.51
HLA-DPA1P20036 RNU6-797P-201ENST00000363101 109 ntBASIC-0.62□□□□□ -2.51
HLA-DPA1P20036 RNU7-74P-201ENST00000459104 62 ntBASIC-0.62□□□□□ -2.51
HLA-DPA1P20036 SNORD126-201ENST00000459475 77 ntBASIC-0.62□□□□□ -2.51
HLA-DPA1P20036 RNU7-123P-201ENST00000515911 60 ntBASIC-0.62□□□□□ -2.51
HLA-DPA1P20036 Y_RNA.809-201ENST00000516058 95 ntBASIC-0.62□□□□□ -2.51
Retrieved 100 of 98,524 protein–RNA pairs in 114.9 ms