Protein–RNA interactions for Protein: P18847

ATF3, Cyclic AMP-dependent transcription factor ATF-3, humanhuman

Predictions only

Length 181 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATF3P18847 Y_RNA.692-201ENST00000516627 105 ntBASIC0.77□□□□□ -2.29
ATF3P18847 RNU6-915P-201ENST00000364943 103 ntBASIC0.76□□□□□ -2.29
ATF3P18847 SNORA25.12-201ENST00000516202 82 ntBASIC0.76□□□□□ -2.29
ATF3P18847 AC018659.1-201ENST00000551083 169 ntBASIC0.76□□□□□ -2.29
ATF3P18847 AL137067.1-201ENST00000615933 120 ntBASIC0.76□□□□□ -2.29
ATF3P18847 Y_RNA.180-201ENST00000363867 113 ntBASIC0.75□□□□□ -2.29
ATF3P18847 RNA5SP117-201ENST00000365294 118 ntBASIC0.75□□□□□ -2.29
ATF3P18847 SNORA72.6-201ENST00000384520 129 ntBASIC0.75□□□□□ -2.29
ATF3P18847 AL162399.1-201ENST00000426090 130 ntTSL 3 BASIC0.75□□□□□ -2.29
ATF3P18847 AP001340.1-201ENST00000624405 217 ntBASIC0.75□□□□□ -2.29
ATF3P18847 VTRNA1-3-201ENST00000365645 89 ntBASIC0.74□□□□□ -2.29
ATF3P18847 RNY1P8-201ENST00000383970 114 ntBASIC0.74□□□□□ -2.29
ATF3P18847 RNU4-69P-201ENST00000410677 143 ntBASIC0.74□□□□□ -2.29
ATF3P18847 RNU5E-3P-201ENST00000515913 68 ntBASIC0.74□□□□□ -2.29
ATF3P18847 MIR3121-201ENST00000579680 77 ntBASIC0.74□□□□□ -2.29
ATF3P18847 RNU6-945P-201ENST00000383947 107 ntBASIC0.73□□□□□ -2.29
ATF3P18847 Y_RNA.464-201ENST00000384282 110 ntBASIC0.73□□□□□ -2.29
ATF3P18847 RNU7-137P-201ENST00000516788 62 ntBASIC0.73□□□□□ -2.29
ATF3P18847 AP001328.1-201ENST00000528550 176 ntBASIC0.73□□□□□ -2.29
ATF3P18847 AC108081.1-201ENST00000604358 221 ntBASIC0.73□□□□□ -2.29
ATF3P18847 ZBTB41-201ENST00000367405 8478 ntAPPRIS P1 TSL 1 (best) BASIC0.72□□□□□ -2.29
ATF3P18847 SNORD114-10-201ENST00000363409 72 ntBASIC0.72□□□□□ -2.29
ATF3P18847 Y_RNA.215-201ENST00000364204 112 ntBASIC0.72□□□□□ -2.29
ATF3P18847 RNU6-1194P-201ENST00000516208 104 ntBASIC0.72□□□□□ -2.29
ATF3P18847 RNU4-54P-201ENST00000516428 129 ntBASIC0.72□□□□□ -2.29
ATF3P18847 SNORD67.1-201ENST00000516618 108 ntBASIC0.72□□□□□ -2.29
ATF3P18847 RNY4P20-201ENST00000516678 93 ntBASIC0.72□□□□□ -2.29
ATF3P18847 Y_RNA.420-201ENST00000384043 110 ntBASIC0.71□□□□□ -2.3
ATF3P18847 AC114737.2-201ENST00000421583 173 ntBASIC0.71□□□□□ -2.3
ATF3P18847 SNORA62.5-201ENST00000516634 120 ntBASIC0.71□□□□□ -2.3
ATF3P18847 MIR4514-201ENST00000581410 57 ntBASIC0.71□□□□□ -2.3
ATF3P18847 Y_RNA.174-201ENST00000363781 105 ntBASIC0.7□□□□□ -2.3
ATF3P18847 MIR569-201ENST00000385228 96 ntBASIC0.7□□□□□ -2.3
ATF3P18847 Y_RNA.617-201ENST00000410920 90 ntBASIC0.7□□□□□ -2.3
ATF3P18847 RN7SKP12-201ENST00000516275 143 ntBASIC0.7□□□□□ -2.3
ATF3P18847 SNORA25.16-201ENST00000516741 121 ntBASIC0.7□□□□□ -2.3
ATF3P18847 RNU6-1212P-201ENST00000517023 104 ntBASIC0.7□□□□□ -2.3
ATF3P18847 MTND5P41-201ENST00000517498 206 ntBASIC0.7□□□□□ -2.3
ATF3P18847 MIR3668-201ENST00000582138 75 ntBASIC0.7□□□□□ -2.3
ATF3P18847 FAM13A-AS1_1.1-201ENST00000612555 119 ntBASIC0.7□□□□□ -2.3
ATF3P18847 AC021753.1-201ENST00000635724 168 ntBASIC0.7□□□□□ -2.3
ATF3P18847 TRAJ1-201ENST00000390536 62 ntAPPRIS P1 BASIC0.69□□□□□ -2.3
ATF3P18847 SNORD77B-201ENST00000391112 67 ntBASIC0.69□□□□□ -2.3
ATF3P18847 RNU4-58P-201ENST00000363192 141 ntBASIC0.68□□□□□ -2.3
ATF3P18847 MIR1270-201ENST00000459320 83 ntBASIC0.68□□□□□ -2.3
ATF3P18847 RNU6-469P-201ENST00000516253 101 ntBASIC0.68□□□□□ -2.3
ATF3P18847 DEFB131E-201ENST00000532329 154 ntBASIC0.68□□□□□ -2.3
ATF3P18847 AL359881.1-201ENST00000602916 267 ntBASIC0.68□□□□□ -2.3
ATF3P18847 U7.2-201ENST00000607576 63 ntBASIC0.68□□□□□ -2.3
ATF3P18847 uc_338.16-201ENST00000621804 95 ntBASIC0.68□□□□□ -2.3
ATF3P18847 RNA5SP133-201ENST00000363368 119 ntBASIC0.67□□□□□ -2.3
ATF3P18847 RNU6-647P-201ENST00000364243 107 ntBASIC0.67□□□□□ -2.3
ATF3P18847 Y_RNA.488-201ENST00000384403 102 ntBASIC0.67□□□□□ -2.3
ATF3P18847 Y_RNA.536-201ENST00000384621 113 ntBASIC0.67□□□□□ -2.3
ATF3P18847 MIR92A1-201ENST00000385233 78 ntBASIC0.67□□□□□ -2.3
ATF3P18847 RNA5SP63-201ENST00000391225 112 ntBASIC0.67□□□□□ -2.3
ATF3P18847 RNU6-135P-201ENST00000516769 101 ntBASIC0.67□□□□□ -2.3
ATF3P18847 Y_RNA.697-201ENST00000516776 113 ntBASIC0.67□□□□□ -2.3
ATF3P18847 RNA5SP94-201ENST00000516917 108 ntBASIC0.67□□□□□ -2.3
ATF3P18847 MIR3678-201ENST00000578455 94 ntBASIC0.67□□□□□ -2.3
ATF3P18847 U6.109-201ENST00000636749 87 ntBASIC0.67□□□□□ -2.3
ATF3P18847 Y_RNA.114-201ENST00000363265 113 ntBASIC0.66□□□□□ -2.3
ATF3P18847 Y_RNA.170-201ENST00000363746 110 ntBASIC0.66□□□□□ -2.3
ATF3P18847 RNU6-733P-201ENST00000410759 104 ntBASIC0.66□□□□□ -2.3
ATF3P18847 RNA5SP272-201ENST00000516095 111 ntBASIC0.66□□□□□ -2.3
ATF3P18847 AC022523.2-201ENST00000561045 150 ntBASIC0.66□□□□□ -2.3
ATF3P18847 AC092634.7-201ENST00000621022 103 ntBASIC0.66□□□□□ -2.3
ATF3P18847 CEP290-203ENST00000547691 5968 ntTSL 1 (best) BASIC0.65□□□□□ -2.3
ATF3P18847 Y_RNA.294-201ENST00000364916 102 ntBASIC0.65□□□□□ -2.31
ATF3P18847 AC138749.4-201ENST00000563970 127 ntBASIC0.65□□□□□ -2.31
ATF3P18847 HOXA11-AS1_6.1-201ENST00000620092 179 ntBASIC0.65□□□□□ -2.31
ATF3P18847 NEAT1_2.1-201ENST00000620525 105 ntBASIC0.65□□□□□ -2.31
ATF3P18847 Y_RNA.32-201ENST00000362589 110 ntBASIC0.64□□□□□ -2.31
ATF3P18847 RNU6-291P-201ENST00000384720 107 ntBASIC0.64□□□□□ -2.31
ATF3P18847 RNU6-535P-201ENST00000384722 107 ntBASIC0.64□□□□□ -2.31
ATF3P18847 RNU6-679P-201ENST00000391003 106 ntBASIC0.64□□□□□ -2.31
ATF3P18847 ATP6V0E1P1-201ENST00000412537 226 ntBASIC0.64□□□□□ -2.31
ATF3P18847 RNU7-200P-201ENST00000516105 62 ntBASIC0.64□□□□□ -2.31
ATF3P18847 RNA5SP285-201ENST00000516619 119 ntBASIC0.64□□□□□ -2.31
ATF3P18847 RNU6-531P-201ENST00000516694 104 ntBASIC0.64□□□□□ -2.31
ATF3P18847 AC023932.2-201ENST00000603176 175 ntBASIC0.64□□□□□ -2.31
ATF3P18847 C18orf54-201ENST00000300091 5237 ntAPPRIS P1 TSL 1 (best) BASIC0.63□□□□□ -2.31
ATF3P18847 RNY1P2-201ENST00000364820 117 ntBASIC0.63□□□□□ -2.31
ATF3P18847 MTND5P34-201ENST00000568888 325 ntBASIC0.63□□□□□ -2.31
ATF3P18847 AC105081.1-201ENST00000617727 106 ntBASIC0.63□□□□□ -2.31
ATF3P18847 RNU6-1104P-201ENST00000384723 104 ntBASIC0.62□□□□□ -2.31
ATF3P18847 RNU6-907P-201ENST00000390924 102 ntBASIC0.62□□□□□ -2.31
ATF3P18847 RN7SKP19-201ENST00000516016 252 ntBASIC0.62□□□□□ -2.31
ATF3P18847 SNORA31.14-201ENST00000516728 116 ntBASIC0.62□□□□□ -2.31
ATF3P18847 IGKV1-22-201ENST00000524313 326 ntBASIC0.62□□□□□ -2.31
ATF3P18847 MIR6086-201ENST00000638065 55 ntBASIC0.62□□□□□ -2.31
ATF3P18847 MIRLET7F2-201ENST00000385277 83 ntBASIC0.61□□□□□ -2.31
ATF3P18847 RNU6ATAC31P-201ENST00000408513 126 ntBASIC0.61□□□□□ -2.31
ATF3P18847 RNA5SP136-201ENST00000410906 107 ntBASIC0.61□□□□□ -2.31
ATF3P18847 SNORD71-201ENST00000411292 86 ntBASIC0.61□□□□□ -2.31
ATF3P18847 RNU6-426P-201ENST00000516464 97 ntBASIC0.61□□□□□ -2.31
ATF3P18847 uc_338.17-201ENST00000619633 179 ntBASIC0.61□□□□□ -2.31
ATF3P18847 SAMD9-203ENST00000620985 6754 ntAPPRIS P1 TSL 2 BASIC0.6□□□□□ -2.31
ATF3P18847 Y_RNA.119-201ENST00000363301 96 ntBASIC0.6□□□□□ -2.31
ATF3P18847 RNA5SP517-201ENST00000364724 117 ntBASIC0.6□□□□□ -2.31
Retrieved 100 of 98,524 protein–RNA pairs in 105.9 ms