Protein–RNA interactions for Protein: P12109

COL6A1, Collagen alpha-1(VI) chain, humanhuman

Predictions only

Length 1,028 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A1P12109 ST7-OT3_3.1-201ENST00000611709 115 ntBASIC1.73□□□□□ -2.13
COL6A1P12109 MIR376B-201ENST00000614515 100 ntBASIC1.73□□□□□ -2.13
COL6A1P12109 AL157834.3-201ENST00000615543 103 ntBASIC1.73□□□□□ -2.13
COL6A1P12109 AL662814.1-201ENST00000617364 121 ntBASIC1.73□□□□□ -2.13
COL6A1P12109 NFIA-AS1-206ENST00000630199 220 ntTSL 5 BASIC1.73□□□□□ -2.13
COL6A1P12109 RNY1P13-201ENST00000365030 105 ntBASIC1.72□□□□□ -2.13
COL6A1P12109 RNU7-48P-201ENST00000458875 63 ntBASIC1.72□□□□□ -2.13
COL6A1P12109 UBL5P1-201ENST00000507979 193 ntBASIC1.72□□□□□ -2.13
COL6A1P12109 RNU6-162P-201ENST00000516228 103 ntBASIC1.72□□□□□ -2.13
COL6A1P12109 MIR2115-201ENST00000516657 100 ntBASIC1.72□□□□□ -2.13
COL6A1P12109 SNORA31.24-201ENST00000517232 57 ntBASIC1.72□□□□□ -2.13
COL6A1P12109 MIR548Z-201ENST00000584743 97 ntBASIC1.72□□□□□ -2.13
COL6A1P12109 AP000753.3-201ENST00000604083 169 ntBASIC1.72□□□□□ -2.13
COL6A1P12109 PRELID3BP2-201ENST00000605362 201 ntBASIC1.72□□□□□ -2.13
COL6A1P12109 AC022709.1-201ENST00000615967 87 ntBASIC1.72□□□□□ -2.13
COL6A1P12109 AC105081.1-201ENST00000617727 106 ntBASIC1.72□□□□□ -2.13
COL6A1P12109 AL353770.2-201ENST00000620024 78 ntBASIC1.72□□□□□ -2.13
COL6A1P12109 RNU6-813P-201ENST00000384691 107 ntBASIC1.71□□□□□ -2.14
COL6A1P12109 MIR34C-201ENST00000384831 77 ntBASIC1.71□□□□□ -2.14
COL6A1P12109 RNU6-1321P-201ENST00000390905 107 ntBASIC1.71□□□□□ -2.14
COL6A1P12109 RNU6-1307P-201ENST00000391012 103 ntBASIC1.71□□□□□ -2.14
COL6A1P12109 snoU13.2-201ENST00000459201 104 ntBASIC1.71□□□□□ -2.14
COL6A1P12109 RNU6-1006P-201ENST00000516998 103 ntBASIC1.71□□□□□ -2.14
COL6A1P12109 AC087277.2-201ENST00000533203 151 ntTSL 5 BASIC1.71□□□□□ -2.14
COL6A1P12109 AC133485.1-201ENST00000567176 124 ntBASIC1.71□□□□□ -2.14
COL6A1P12109 MIR4264-201ENST00000583520 66 ntBASIC1.71□□□□□ -2.14
COL6A1P12109 ANGPTL3-201ENST00000371129 2805 ntAPPRIS P1 TSL 1 (best) BASIC1.71□□□□□ -2.14
COL6A1P12109 MIR96-201ENST00000362288 78 ntBASIC1.7□□□□□ -2.14
COL6A1P12109 SNORA25.3-201ENST00000363205 127 ntBASIC1.7□□□□□ -2.14
COL6A1P12109 SNORD114-26-201ENST00000363543 72 ntBASIC1.7□□□□□ -2.14
COL6A1P12109 RNU6-820P-201ENST00000384273 107 ntBASIC1.7□□□□□ -2.14
COL6A1P12109 Y_RNA.467-201ENST00000384297 102 ntBASIC1.7□□□□□ -2.14
COL6A1P12109 RPS27P16-201ENST00000425758 201 ntBASIC1.7□□□□□ -2.14
COL6A1P12109 AC109327.2-201ENST00000448339 378 ntBASIC1.7□□□□□ -2.14
COL6A1P12109 RNU1-92P-201ENST00000517017 135 ntBASIC1.7□□□□□ -2.14
COL6A1P12109 AP001362.1-201ENST00000625165 124 ntBASIC1.7□□□□□ -2.14
COL6A1P12109 MIR588-201ENST00000384900 83 ntBASIC1.69□□□□□ -2.14
COL6A1P12109 MT-TN-201ENST00000387400 73 ntBASIC1.69□□□□□ -2.14
COL6A1P12109 AC244023.1-201ENST00000426884 112 ntBASIC1.69□□□□□ -2.14
COL6A1P12109 AL133373.1-201ENST00000497098 94 ntBASIC1.69□□□□□ -2.14
COL6A1P12109 RNU11-2P-201ENST00000516898 142 ntBASIC1.69□□□□□ -2.14
COL6A1P12109 AC242498.1-201ENST00000604134 111 ntBASIC1.69□□□□□ -2.14
COL6A1P12109 RNU6-90P-201ENST00000606352 106 ntBASIC1.69□□□□□ -2.14
COL6A1P12109 FAM13A-AS1_1.1-201ENST00000612555 119 ntBASIC1.69□□□□□ -2.14
COL6A1P12109 MIR6734-201ENST00000621166 68 ntBASIC1.69□□□□□ -2.14
COL6A1P12109 SNORD116-10-201ENST00000363791 102 ntBASIC1.68□□□□□ -2.14
COL6A1P12109 Y_RNA.247-201ENST00000364500 92 ntBASIC1.68□□□□□ -2.14
COL6A1P12109 SNORA25.8-201ENST00000364831 128 ntBASIC1.68□□□□□ -2.14
COL6A1P12109 RNU6-949P-201ENST00000384040 107 ntBASIC1.68□□□□□ -2.14
COL6A1P12109 MIR548G-201ENST00000408442 89 ntBASIC1.68□□□□□ -2.14
COL6A1P12109 RPL30P7-201ENST00000479312 323 ntBASIC1.68□□□□□ -2.14
COL6A1P12109 RN7SKP12-201ENST00000516275 143 ntBASIC1.68□□□□□ -2.14
COL6A1P12109 snoMBII-202.2-201ENST00000517263 86 ntBASIC1.68□□□□□ -2.14
COL6A1P12109 EYS-205ENST00000393380 5450 ntTSL 1 (best) BASIC1.68□□□□□ -2.14
COL6A1P12109 UBE3A-225ENST00000636667 5726 ntTSL 5 BASIC1.68□□□□□ -2.14
COL6A1P12109 MIR26B-201ENST00000362251 77 ntBASIC1.67□□□□□ -2.14
COL6A1P12109 Y_RNA.388-201ENST00000383919 113 ntBASIC1.67□□□□□ -2.14
COL6A1P12109 U8.15-201ENST00000390947 134 ntBASIC1.67□□□□□ -2.14
COL6A1P12109 MIR1302-7-201ENST00000408841 72 ntBASIC1.67□□□□□ -2.14
COL6A1P12109 SPINT5P-201ENST00000448174 155 ntBASIC1.67□□□□□ -2.14
COL6A1P12109 MTND5P40-201ENST00000559945 246 ntBASIC1.67□□□□□ -2.14
COL6A1P12109 AC062037.1-201ENST00000605302 128 ntBASIC1.67□□□□□ -2.14
COL6A1P12109 MIR103A2-201ENST00000362154 78 ntBASIC1.66□□□□□ -2.14
COL6A1P12109 RNU1-93P-201ENST00000364704 169 ntBASIC1.66□□□□□ -2.14
COL6A1P12109 Y_RNA.567-201ENST00000384736 106 ntBASIC1.66□□□□□ -2.14
COL6A1P12109 COX7A2-206ENST00000472311 325 ntTSL 2 BASIC1.66□□□□□ -2.14
COL6A1P12109 RNU6-86P-201ENST00000606534 107 ntBASIC1.66□□□□□ -2.14
COL6A1P12109 MIR6779-201ENST00000617283 64 ntBASIC1.66□□□□□ -2.14
COL6A1P12109 Y_RNA.17-201ENST00000362433 111 ntBASIC1.65□□□□□ -2.15
COL6A1P12109 RNU6-1163P-201ENST00000364516 107 ntBASIC1.65□□□□□ -2.15
COL6A1P12109 RNY1P2-201ENST00000364820 117 ntBASIC1.65□□□□□ -2.15
COL6A1P12109 RNA5SP363-201ENST00000365072 115 ntBASIC1.65□□□□□ -2.15
COL6A1P12109 SNORD116-22-201ENST00000384430 92 ntBASIC1.65□□□□□ -2.15
COL6A1P12109 MIR563-201ENST00000385080 79 ntBASIC1.65□□□□□ -2.15
COL6A1P12109 RNU6ATAC42P-201ENST00000408637 95 ntBASIC1.65□□□□□ -2.15
COL6A1P12109 RNU7-62P-201ENST00000458856 62 ntBASIC1.65□□□□□ -2.15
COL6A1P12109 RNU6ATAC17P-201ENST00000516074 71 ntBASIC1.65□□□□□ -2.15
COL6A1P12109 RN7SKP88-201ENST00000516847 250 ntBASIC1.65□□□□□ -2.15
COL6A1P12109 7SK.8-201ENST00000612110 250 ntBASIC1.65□□□□□ -2.15
COL6A1P12109 7SK.11-201ENST00000615477 250 ntBASIC1.65□□□□□ -2.15
COL6A1P12109 7SK.13-201ENST00000622040 250 ntBASIC1.65□□□□□ -2.15
COL6A1P12109 SKIL-204ENST00000458537 7182 ntAPPRIS P1 TSL 1 (best) BASIC1.64□□□□□ -2.15
COL6A1P12109 MIR494-201ENST00000349529 81 ntBASIC1.64□□□□□ -2.15
COL6A1P12109 MIR377-201ENST00000362145 69 ntBASIC1.64□□□□□ -2.15
COL6A1P12109 RNA5SP264-201ENST00000363115 107 ntBASIC1.64□□□□□ -2.15
COL6A1P12109 SNORD58A-201ENST00000383875 65 ntBASIC1.64□□□□□ -2.15
COL6A1P12109 RNU6-1165P-201ENST00000410119 107 ntBASIC1.64□□□□□ -2.15
COL6A1P12109 AL365434.1-201ENST00000412362 380 ntTSL 3 BASIC1.64□□□□□ -2.15
COL6A1P12109 AC019288.1-201ENST00000557918 224 ntBASIC1.64□□□□□ -2.15
COL6A1P12109 AC103810.7-201ENST00000607821 91 ntBASIC1.64□□□□□ -2.15
COL6A1P12109 IGLL4P-201ENST00000614590 133 ntBASIC1.64□□□□□ -2.15
COL6A1P12109 PVT1_3.1-201ENST00000620853 95 ntBASIC1.64□□□□□ -2.15
COL6A1P12109 Y_RNA.168-201ENST00000363740 102 ntBASIC1.63□□□□□ -2.15
COL6A1P12109 RNY1P1-201ENST00000364372 112 ntBASIC1.63□□□□□ -2.15
COL6A1P12109 MT-TF-201ENST00000387314 71 ntBASIC1.63□□□□□ -2.15
COL6A1P12109 RNU6-205P-201ENST00000390858 107 ntBASIC1.63□□□□□ -2.15
COL6A1P12109 Y_RNA.593-201ENST00000410292 98 ntBASIC1.63□□□□□ -2.15
COL6A1P12109 AL354695.1-201ENST00000427935 228 ntBASIC1.63□□□□□ -2.15
COL6A1P12109 AC024382.1-201ENST00000520224 292 ntTSL 3 BASIC1.63□□□□□ -2.15
COL6A1P12109 AP003716.2-201ENST00000528260 108 ntBASIC1.63□□□□□ -2.15
Retrieved 100 of 98,524 protein–RNA pairs in 114.7 ms