Protein–RNA interactions for Protein: P09012

SNRPA, U1 small nuclear ribonucleoprotein A, humanhuman

Known RBP Predictions only

Length 282 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPAP09012 MIR4500-201ENST00000579472 76 ntBASIC-0.57□□□□□ -2.5
SNRPAP09012 SNORD114-10-201ENST00000363409 72 ntBASIC-0.58□□□□□ -2.5
SNRPAP09012 RNU6-449P-201ENST00000383914 107 ntBASIC-0.58□□□□□ -2.5
SNRPAP09012 RNU6-1144P-201ENST00000384247 104 ntBASIC-0.58□□□□□ -2.5
SNRPAP09012 TRAJ28-201ENST00000390509 66 ntAPPRIS P1 BASIC-0.58□□□□□ -2.5
SNRPAP09012 RNU6-1321P-201ENST00000390905 107 ntBASIC-0.58□□□□□ -2.5
SNRPAP09012 AC097635.1-201ENST00000450678 155 ntBASIC-0.58□□□□□ -2.5
SNRPAP09012 AC096720.1-201ENST00000604441 183 ntBASIC-0.58□□□□□ -2.5
SNRPAP09012 RNU7-10P-201ENST00000607194 63 ntBASIC-0.58□□□□□ -2.5
SNRPAP09012 U2.14-201ENST00000615943 113 ntBASIC-0.58□□□□□ -2.5
SNRPAP09012 SNORD115-2-201ENST00000362842 82 ntBASIC-0.59□□□□□ -2.5
SNRPAP09012 Y_RNA.82-201ENST00000363000 102 ntBASIC-0.59□□□□□ -2.5
SNRPAP09012 Y_RNA.92-201ENST00000363043 102 ntBASIC-0.59□□□□□ -2.5
SNRPAP09012 Y_RNA.153-201ENST00000363615 91 ntBASIC-0.59□□□□□ -2.5
SNRPAP09012 Y_RNA.235-201ENST00000364412 102 ntBASIC-0.59□□□□□ -2.5
SNRPAP09012 Y_RNA.306-201ENST00000365015 102 ntBASIC-0.59□□□□□ -2.5
SNRPAP09012 Y_RNA.312-201ENST00000365089 102 ntBASIC-0.59□□□□□ -2.5
SNRPAP09012 SNORD115-20-201ENST00000365099 82 ntBASIC-0.59□□□□□ -2.5
SNRPAP09012 Y_RNA.322-201ENST00000365151 102 ntBASIC-0.59□□□□□ -2.5
SNRPAP09012 RNU6-1184P-201ENST00000384588 108 ntBASIC-0.59□□□□□ -2.5
SNRPAP09012 Y_RNA.650-201ENST00000459002 102 ntBASIC-0.59□□□□□ -2.5
SNRPAP09012 RNU2-35P-201ENST00000516446 142 ntBASIC-0.59□□□□□ -2.5
SNRPAP09012 RNA5SP395-201ENST00000516567 118 ntBASIC-0.59□□□□□ -2.5
SNRPAP09012 Y_RNA.777-201ENST00000516982 102 ntBASIC-0.59□□□□□ -2.5
SNRPAP09012 RNU6-988P-201ENST00000519081 107 ntBASIC-0.59□□□□□ -2.5
SNRPAP09012 Y_RNA.771-201ENST00000598668 102 ntBASIC-0.59□□□□□ -2.5
SNRPAP09012 Y_RNA.789-201ENST00000622480 102 ntBASIC-0.59□□□□□ -2.5
SNRPAP09012 MTND4P29-201ENST00000503122 1372 ntBASIC-0.59□□□□□ -2.5
SNRPAP09012 Y_RNA.323-201ENST00000365157 109 ntBASIC-0.6□□□□□ -2.51
SNRPAP09012 RNU7-195P-201ENST00000458793 62 ntBASIC-0.6□□□□□ -2.51
SNRPAP09012 RNU6-1143P-201ENST00000516125 104 ntBASIC-0.6□□□□□ -2.51
SNRPAP09012 DEFB131B-201ENST00000530210 213 ntAPPRIS P1 TSL 1 (best) BASIC-0.6□□□□□ -2.51
SNRPAP09012 MIR3920-201ENST00000581751 86 ntBASIC-0.6□□□□□ -2.51
SNRPAP09012 Y_RNA.216-201ENST00000364205 93 ntBASIC-0.61□□□□□ -2.51
SNRPAP09012 RNU1-141P-201ENST00000364623 158 ntBASIC-0.61□□□□□ -2.51
SNRPAP09012 RNU6-690P-201ENST00000365242 106 ntBASIC-0.61□□□□□ -2.51
SNRPAP09012 Y_RNA.448-201ENST00000384185 108 ntBASIC-0.61□□□□□ -2.51
SNRPAP09012 Y_RNA.531-201ENST00000384589 121 ntBASIC-0.61□□□□□ -2.51
SNRPAP09012 MIR604-201ENST00000384880 94 ntBASIC-0.61□□□□□ -2.51
SNRPAP09012 RNU7-13P-201ENST00000516413 62 ntBASIC-0.61□□□□□ -2.51
SNRPAP09012 RNA5SP66-201ENST00000517178 101 ntBASIC-0.61□□□□□ -2.51
SNRPAP09012 Y_RNA.512-201ENST00000384518 102 ntBASIC-0.62□□□□□ -2.51
SNRPAP09012 RNU6-455P-201ENST00000384681 107 ntBASIC-0.62□□□□□ -2.51
SNRPAP09012 RNU6-1307P-201ENST00000391012 103 ntBASIC-0.62□□□□□ -2.51
SNRPAP09012 SNORA3B-201ENST00000391305 131 ntBASIC-0.62□□□□□ -2.51
SNRPAP09012 RNY3P16-201ENST00000516338 101 ntBASIC-0.62□□□□□ -2.51
SNRPAP09012 Y_RNA.692-201ENST00000516627 105 ntBASIC-0.62□□□□□ -2.51
SNRPAP09012 MIR4680-201ENST00000580906 66 ntBASIC-0.62□□□□□ -2.51
SNRPAP09012 MIR548S-201ENST00000581352 82 ntBASIC-0.62□□□□□ -2.51
SNRPAP09012 MIR4744-201ENST00000581563 82 ntBASIC-0.62□□□□□ -2.51
SNRPAP09012 uc_338.10-201ENST00000621872 182 ntBASIC-0.62□□□□□ -2.51
SNRPAP09012 Y_RNA.52-201ENST00000362760 96 ntBASIC-0.63□□□□□ -2.51
SNRPAP09012 Y_RNA.158-201ENST00000363651 101 ntBASIC-0.63□□□□□ -2.51
SNRPAP09012 RNU6-103P-201ENST00000363686 107 ntBASIC-0.63□□□□□ -2.51
SNRPAP09012 RNU4-84P-201ENST00000364200 139 ntBASIC-0.63□□□□□ -2.51
SNRPAP09012 Y_RNA.294-201ENST00000364916 102 ntBASIC-0.63□□□□□ -2.51
SNRPAP09012 MIR206-201ENST00000384872 86 ntBASIC-0.63□□□□□ -2.51
SNRPAP09012 MIR181B2-201ENST00000385004 89 ntBASIC-0.63□□□□□ -2.51
SNRPAP09012 MIR1265-201ENST00000408444 86 ntBASIC-0.63□□□□□ -2.51
SNRPAP09012 Z95118.1-201ENST00000421372 247 ntBASIC-0.63□□□□□ -2.51
SNRPAP09012 RNU7-74P-201ENST00000459104 62 ntBASIC-0.63□□□□□ -2.51
SNRPAP09012 Y_RNA.809-201ENST00000516058 95 ntBASIC-0.63□□□□□ -2.51
SNRPAP09012 RNU6-758P-201ENST00000516292 89 ntBASIC-0.63□□□□□ -2.51
SNRPAP09012 Y_RNA.262-201ENST00000364641 102 ntBASIC-0.64□□□□□ -2.51
SNRPAP09012 RNU6-47P-201ENST00000383866 107 ntBASIC-0.64□□□□□ -2.51
SNRPAP09012 Y_RNA.552-201ENST00000384665 112 ntBASIC-0.64□□□□□ -2.51
SNRPAP09012 SNORD63B-201ENST00000411005 70 ntBASIC-0.64□□□□□ -2.51
SNRPAP09012 RNU7-48P-201ENST00000458875 63 ntBASIC-0.64□□□□□ -2.51
SNRPAP09012 RNU6-1137P-201ENST00000517073 99 ntBASIC-0.64□□□□□ -2.51
SNRPAP09012 YWHAEP2-201ENST00000580066 112 ntBASIC-0.64□□□□□ -2.51
SNRPAP09012 MIR4282-201ENST00000583613 67 ntBASIC-0.64□□□□□ -2.51
SNRPAP09012 RNU2-4P-201ENST00000606190 192 ntBASIC-0.64□□□□□ -2.51
SNRPAP09012 AL391099.1-201ENST00000624635 187 ntBASIC-0.64□□□□□ -2.51
SNRPAP09012 ABCA9-AS1-203ENST00000627596 426 ntTSL 5 BASIC-0.64□□□□□ -2.51
SNRPAP09012 SNORD114-29-201ENST00000364819 70 ntBASIC-0.65□□□□□ -2.51
SNRPAP09012 Y_RNA.431-201ENST00000384086 102 ntBASIC-0.65□□□□□ -2.51
SNRPAP09012 RNU6-524P-201ENST00000384270 107 ntBASIC-0.65□□□□□ -2.51
SNRPAP09012 RNU6-578P-201ENST00000390980 103 ntBASIC-0.65□□□□□ -2.51
SNRPAP09012 AL445193.1-201ENST00000441183 141 ntBASIC-0.65□□□□□ -2.51
SNRPAP09012 RNU6-240P-201ENST00000516098 97 ntBASIC-0.65□□□□□ -2.51
SNRPAP09012 RNA5SP236-201ENST00000516169 116 ntBASIC-0.65□□□□□ -2.51
SNRPAP09012 RNA5SP169-201ENST00000517268 117 ntBASIC-0.65□□□□□ -2.51
SNRPAP09012 MTND5P40-201ENST00000559945 246 ntBASIC-0.65□□□□□ -2.51
SNRPAP09012 MIR4436A-201ENST00000585278 85 ntBASIC-0.65□□□□□ -2.51
SNRPAP09012 AC093726.3-201ENST00000637588 150 ntBASIC-0.65□□□□□ -2.51
SNRPAP09012 Y_RNA.138-201ENST00000363462 102 ntBASIC-0.66□□□□□ -2.52
SNRPAP09012 RNU6-643P-201ENST00000384018 107 ntBASIC-0.66□□□□□ -2.52
SNRPAP09012 RNU6-1201P-201ENST00000384227 107 ntBASIC-0.66□□□□□ -2.52
SNRPAP09012 MIR224-201ENST00000384889 81 ntBASIC-0.66□□□□□ -2.52
SNRPAP09012 MT-TD-201ENST00000387419 68 ntBASIC-0.66□□□□□ -2.52
SNRPAP09012 RNU6-1109P-201ENST00000391187 107 ntBASIC-0.66□□□□□ -2.52
SNRPAP09012 AL603914.1-201ENST00000401964 204 ntBASIC-0.66□□□□□ -2.52
SNRPAP09012 AC074198.2-201ENST00000508153 258 ntBASIC-0.66□□□□□ -2.52
SNRPAP09012 RNU6-175P-201ENST00000516896 107 ntBASIC-0.66□□□□□ -2.52
SNRPAP09012 MIR4643-201ENST00000577473 78 ntBASIC-0.66□□□□□ -2.52
SNRPAP09012 AC069503.3-201ENST00000618674 145 ntBASIC-0.66□□□□□ -2.52
SNRPAP09012 SNORD114-14-201ENST00000362723 75 ntBASIC-0.67□□□□□ -2.52
SNRPAP09012 Y_RNA.308-201ENST00000365043 101 ntBASIC-0.67□□□□□ -2.52
SNRPAP09012 MIR539-201ENST00000365690 78 ntBASIC-0.67□□□□□ -2.52
SNRPAP09012 RNY3P14-201ENST00000384309 102 ntBASIC-0.67□□□□□ -2.52
Retrieved 100 of 98,524 protein–RNA pairs in 219.1 ms