Protein–RNA interactions for Protein: P06340

HLA-DOA, HLA class II histocompatibility antigen, DO alpha chain, humanhuman

Predictions only

Length 250 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DOAP06340 MIR6504-201ENST00000613520 61 ntBASIC1.45□□□□□ -2.18
HLA-DOAP06340 MALAT1.1-201ENST00000618249 95 ntBASIC1.45□□□□□ -2.18
HLA-DOAP06340 ZNF260-205ENST00000593142 4047 ntAPPRIS P1 TSL 1 (best) BASIC1.45□□□□□ -2.18
HLA-DOAP06340 Y_RNA.93-201ENST00000363066 109 ntBASIC1.44□□□□□ -2.18
HLA-DOAP06340 Y_RNA.290-201ENST00000364879 114 ntBASIC1.44□□□□□ -2.18
HLA-DOAP06340 Y_RNA.330-201ENST00000365230 109 ntBASIC1.44□□□□□ -2.18
HLA-DOAP06340 Y_RNA.377-201ENST00000365644 108 ntBASIC1.44□□□□□ -2.18
HLA-DOAP06340 RNU6-949P-201ENST00000384040 107 ntBASIC1.44□□□□□ -2.18
HLA-DOAP06340 SNORA31.2-201ENST00000516019 134 ntBASIC1.44□□□□□ -2.18
HLA-DOAP06340 MIR2115-201ENST00000516657 100 ntBASIC1.44□□□□□ -2.18
HLA-DOAP06340 AC068338.1-201ENST00000565567 176 ntBASIC1.44□□□□□ -2.18
HLA-DOAP06340 MIR4264-201ENST00000583520 66 ntBASIC1.44□□□□□ -2.18
HLA-DOAP06340 AC006254.2-201ENST00000603259 279 ntBASIC1.44□□□□□ -2.18
HLA-DOAP06340 AP000753.3-201ENST00000604083 169 ntBASIC1.44□□□□□ -2.18
HLA-DOAP06340 Y_RNA.95-201ENST00000363079 95 ntBASIC1.43□□□□□ -2.18
HLA-DOAP06340 RNU6-865P-201ENST00000364772 107 ntBASIC1.43□□□□□ -2.18
HLA-DOAP06340 SNORA75.2-201ENST00000391138 150 ntBASIC1.43□□□□□ -2.18
HLA-DOAP06340 SNORA75.3-201ENST00000391231 150 ntBASIC1.43□□□□□ -2.18
HLA-DOAP06340 AC004941.2-201ENST00000427009 228 ntBASIC1.43□□□□□ -2.18
HLA-DOAP06340 RNU7-48P-201ENST00000458875 63 ntBASIC1.43□□□□□ -2.18
HLA-DOAP06340 ST7-AS2_1.1-201ENST00000622900 72 ntBASIC1.43□□□□□ -2.18
HLA-DOAP06340 LRRIQ1-202ENST00000393217 5394 ntAPPRIS P1 TSL 1 (best) BASIC1.42□□□□□ -2.18
HLA-DOAP06340 RNU6-1163P-201ENST00000364516 107 ntBASIC1.42□□□□□ -2.18
HLA-DOAP06340 RNU6-294P-201ENST00000364999 102 ntBASIC1.42□□□□□ -2.18
HLA-DOAP06340 SNORA2B-201ENST00000384583 137 ntBASIC1.42□□□□□ -2.18
HLA-DOAP06340 RNU6-613P-201ENST00000410412 108 ntBASIC1.42□□□□□ -2.18
HLA-DOAP06340 RPS29P28-201ENST00000446439 141 ntBASIC1.42□□□□□ -2.18
HLA-DOAP06340 RNU4ATAC11P-201ENST00000515939 126 ntBASIC1.42□□□□□ -2.18
HLA-DOAP06340 RNU6-158P-201ENST00000517104 100 ntBASIC1.42□□□□□ -2.18
HLA-DOAP06340 AC020891.4-201ENST00000605745 93 ntBASIC1.42□□□□□ -2.18
HLA-DOAP06340 RNU6-86P-201ENST00000606534 107 ntBASIC1.42□□□□□ -2.18
HLA-DOAP06340 ZFAT-AS1_2.1-201ENST00000613742 201 ntBASIC1.42□□□□□ -2.18
HLA-DOAP06340 U7.3-201ENST00000616123 62 ntBASIC1.42□□□□□ -2.18
HLA-DOAP06340 NPAT-201ENST00000278612 6117 ntAPPRIS P2 TSL 1 (best) BASIC1.42□□□□□ -2.18
HLA-DOAP06340 ZGRF1-208ENST00000505019 6652 ntAPPRIS P1 TSL 5 BASIC1.42□□□□□ -2.18
HLA-DOAP06340 CEP290-201ENST00000309041 7616 ntAPPRIS ALT1 TSL 5 BASIC1.42□□□□□ -2.18
HLA-DOAP06340 Y_RNA.190-201ENST00000363964 101 ntBASIC1.41□□□□□ -2.18
HLA-DOAP06340 RNU6-997P-201ENST00000384725 107 ntBASIC1.41□□□□□ -2.18
HLA-DOAP06340 RNU6ATAC2P-201ENST00000387943 126 ntBASIC1.41□□□□□ -2.18
HLA-DOAP06340 TRAJ1-201ENST00000390536 62 ntAPPRIS P1 BASIC1.41□□□□□ -2.18
HLA-DOAP06340 RNU6-762P-201ENST00000517107 102 ntBASIC1.41□□□□□ -2.18
HLA-DOAP06340 AC024382.1-201ENST00000520224 292 ntTSL 3 BASIC1.41□□□□□ -2.18
HLA-DOAP06340 AC138749.4-201ENST00000563970 127 ntBASIC1.41□□□□□ -2.18
HLA-DOAP06340 U6.109-201ENST00000636749 87 ntBASIC1.41□□□□□ -2.18
HLA-DOAP06340 Y_RNA.10-201ENST00000362371 110 ntBASIC1.4□□□□□ -2.19
HLA-DOAP06340 SNORD45B-201ENST00000364617 72 ntBASIC1.4□□□□□ -2.19
HLA-DOAP06340 MT-TN-201ENST00000387400 73 ntBASIC1.4□□□□□ -2.19
HLA-DOAP06340 RNU6-1054P-201ENST00000411293 104 ntBASIC1.4□□□□□ -2.19
HLA-DOAP06340 SNORD83.1-201ENST00000411362 77 ntBASIC1.4□□□□□ -2.19
HLA-DOAP06340 AC023827.1-201ENST00000569247 97 ntBASIC1.4□□□□□ -2.19
HLA-DOAP06340 AC090897.1-201ENST00000580909 226 ntBASIC1.4□□□□□ -2.19
HLA-DOAP06340 SNORA4-201ENST00000584302 138 ntBASIC1.4□□□□□ -2.19
HLA-DOAP06340 KTN1-205ENST00000395314 4618 ntAPPRIS P4 TSL 1 (best) BASIC1.39□□□□□ -2.19
HLA-DOAP06340 Y_RNA.168-201ENST00000363740 102 ntBASIC1.39□□□□□ -2.19
HLA-DOAP06340 SNORD38.1-201ENST00000363863 68 ntBASIC1.39□□□□□ -2.19
HLA-DOAP06340 Y_RNA.224-201ENST00000364308 111 ntBASIC1.39□□□□□ -2.19
HLA-DOAP06340 SNORD73B-201ENST00000364394 72 ntBASIC1.39□□□□□ -2.19
HLA-DOAP06340 RNU6-580P-201ENST00000365159 107 ntBASIC1.39□□□□□ -2.19
HLA-DOAP06340 RNU6-844P-201ENST00000517175 102 ntBASIC1.39□□□□□ -2.19
HLA-DOAP06340 AC133485.1-201ENST00000567176 124 ntBASIC1.39□□□□□ -2.19
HLA-DOAP06340 ZNF654-201ENST00000309495 4957 ntAPPRIS P2 TSL 1 (best) BASIC1.38□□□□□ -2.19
HLA-DOAP06340 Y_RNA.98-201ENST00000363109 102 ntBASIC1.38□□□□□ -2.19
HLA-DOAP06340 RNA5SP133-201ENST00000363368 119 ntBASIC1.38□□□□□ -2.19
HLA-DOAP06340 Y_RNA.191-201ENST00000363972 113 ntBASIC1.38□□□□□ -2.19
HLA-DOAP06340 RNU6-910P-201ENST00000390844 107 ntBASIC1.38□□□□□ -2.19
HLA-DOAP06340 SPINT5P-201ENST00000448174 155 ntBASIC1.38□□□□□ -2.19
HLA-DOAP06340 RNU11-2P-201ENST00000516898 142 ntBASIC1.38□□□□□ -2.19
HLA-DOAP06340 AC103810.7-201ENST00000607821 91 ntBASIC1.38□□□□□ -2.19
HLA-DOAP06340 ST7-OT3_3.1-201ENST00000611709 115 ntBASIC1.38□□□□□ -2.19
HLA-DOAP06340 MIR548G-201ENST00000408442 89 ntBASIC1.37□□□□□ -2.19
HLA-DOAP06340 RNU6ATAC8P-201ENST00000408460 126 ntBASIC1.37□□□□□ -2.19
HLA-DOAP06340 RNU1-98P-201ENST00000458992 160 ntBASIC1.37□□□□□ -2.19
HLA-DOAP06340 IGLVVI-22-1-201ENST00000521183 211 ntBASIC1.37□□□□□ -2.19
HLA-DOAP06340 AC036111.3-201ENST00000526389 112 ntBASIC1.37□□□□□ -2.19
HLA-DOAP06340 MIR4500-201ENST00000579472 76 ntBASIC1.37□□□□□ -2.19
HLA-DOAP06340 MIR4295-201ENST00000585286 85 ntBASIC1.37□□□□□ -2.19
HLA-DOAP06340 AC096720.1-201ENST00000604441 183 ntBASIC1.37□□□□□ -2.19
HLA-DOAP06340 MIR7974-201ENST00000615835 79 ntBASIC1.37□□□□□ -2.19
HLA-DOAP06340 AP001362.1-201ENST00000625165 124 ntBASIC1.37□□□□□ -2.19
HLA-DOAP06340 MIR2052-201ENST00000636055 55 ntBASIC1.37□□□□□ -2.19
HLA-DOAP06340 MIR377-201ENST00000362145 69 ntBASIC1.36□□□□□ -2.19
HLA-DOAP06340 RNA5SP327-201ENST00000362494 101 ntBASIC1.36□□□□□ -2.19
HLA-DOAP06340 Y_RNA.119-201ENST00000363301 96 ntBASIC1.36□□□□□ -2.19
HLA-DOAP06340 Y_RNA.220-201ENST00000364244 109 ntBASIC1.36□□□□□ -2.19
HLA-DOAP06340 BX276092.1-201ENST00000427368 251 ntBASIC1.36□□□□□ -2.19
HLA-DOAP06340 AC087343.1-201ENST00000477341 475 ntBASIC1.36□□□□□ -2.19
HLA-DOAP06340 SNORA25.16-201ENST00000516741 121 ntBASIC1.36□□□□□ -2.19
HLA-DOAP06340 MTND5P40-201ENST00000559945 246 ntBASIC1.36□□□□□ -2.19
HLA-DOAP06340 MIR4491-201ENST00000581087 68 ntBASIC1.36□□□□□ -2.19
HLA-DOAP06340 MIR4452-201ENST00000583004 71 ntBASIC1.36□□□□□ -2.19
HLA-DOAP06340 5S_rRNA.15-201ENST00000611169 127 ntBASIC1.36□□□□□ -2.19
HLA-DOAP06340 AC012676.2-201ENST00000619258 186 ntBASIC1.36□□□□□ -2.19
HLA-DOAP06340 RNY1P2-201ENST00000364820 117 ntBASIC1.35□□□□□ -2.19
HLA-DOAP06340 RNU6-813P-201ENST00000384691 107 ntBASIC1.35□□□□□ -2.19
HLA-DOAP06340 Y_RNA.588-201ENST00000391254 102 ntBASIC1.35□□□□□ -2.19
HLA-DOAP06340 RNU6ATAC41P-201ENST00000408600 126 ntBASIC1.35□□□□□ -2.19
HLA-DOAP06340 SNORD93-201ENST00000408813 74 ntBASIC1.35□□□□□ -2.19
HLA-DOAP06340 RNU6-447P-201ENST00000410293 104 ntBASIC1.35□□□□□ -2.19
HLA-DOAP06340 RNU6-1118P-201ENST00000410382 104 ntBASIC1.35□□□□□ -2.19
HLA-DOAP06340 RNU6-1076P-201ENST00000410397 104 ntBASIC1.35□□□□□ -2.19
Retrieved 100 of 98,524 protein–RNA pairs in 182.4 ms