Protein–RNA interactions for Protein: P01135

TGFA, Protransforming growth factor alpha, humanhuman

Predictions only

Length 160 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TGFAP01135 RNU7-161P-201ENST00000517289 62 ntBASIC-0.36□□□□□ -2.47
TGFAP01135 AC108676.2-201ENST00000605225 163 ntBASIC-0.36□□□□□ -2.47
TGFAP01135 SNORA18.1-201ENST00000363418 128 ntBASIC-0.37□□□□□ -2.47
TGFAP01135 RNY1P2-201ENST00000364820 117 ntBASIC-0.37□□□□□ -2.47
TGFAP01135 Y_RNA.366-201ENST00000365540 102 ntBASIC-0.37□□□□□ -2.47
TGFAP01135 SNORA32-201ENST00000384072 121 ntBASIC-0.37□□□□□ -2.47
TGFAP01135 SNORD67.1-201ENST00000516618 108 ntBASIC-0.37□□□□□ -2.47
TGFAP01135 RNA5SP403-201ENST00000363598 108 ntBASIC-0.38□□□□□ -2.47
TGFAP01135 Y_RNA.483-201ENST00000384380 101 ntBASIC-0.38□□□□□ -2.47
TGFAP01135 RNU6-30P-201ENST00000384561 107 ntBASIC-0.38□□□□□ -2.47
TGFAP01135 MT-TW-201ENST00000387382 68 ntBASIC-0.38□□□□□ -2.47
TGFAP01135 SNORD41.1-201ENST00000391000 69 ntBASIC-0.38□□□□□ -2.47
TGFAP01135 MTCYBP6-201ENST00000441810 138 ntBASIC-0.38□□□□□ -2.47
TGFAP01135 MTND1P19-201ENST00000511780 315 ntBASIC-0.38□□□□□ -2.47
TGFAP01135 AC044792.1-201ENST00000593294 196 ntBASIC-0.38□□□□□ -2.47
TGFAP01135 AC011603.4-201ENST00000611325 277 ntBASIC-0.38□□□□□ -2.47
TGFAP01135 SNORA70.25-201ENST00000612741 95 ntBASIC-0.38□□□□□ -2.47
TGFAP01135 Y_RNA.422-201ENST00000384054 114 ntBASIC-0.39□□□□□ -2.47
TGFAP01135 SNORA75.1-201ENST00000391130 148 ntBASIC-0.39□□□□□ -2.47
TGFAP01135 MIR4643-201ENST00000577473 78 ntBASIC-0.39□□□□□ -2.47
TGFAP01135 RNU2-4P-201ENST00000606190 192 ntBASIC-0.39□□□□□ -2.47
TGFAP01135 RNU6-690P-201ENST00000365242 106 ntBASIC-0.4□□□□□ -2.47
TGFAP01135 SNORD14C-201ENST00000365382 88 ntBASIC-0.4□□□□□ -2.47
TGFAP01135 Y_RNA.512-201ENST00000384518 102 ntBASIC-0.4□□□□□ -2.47
TGFAP01135 Y_RNA.531-201ENST00000384589 121 ntBASIC-0.4□□□□□ -2.47
TGFAP01135 SNORA32.3-201ENST00000384772 121 ntBASIC-0.4□□□□□ -2.47
TGFAP01135 AC108059.2-201ENST00000434626 151 ntBASIC-0.4□□□□□ -2.47
TGFAP01135 RNU2-60P-201ENST00000517290 128 ntBASIC-0.4□□□□□ -2.47
TGFAP01135 MRPS18CP4-201ENST00000535821 231 ntBASIC-0.4□□□□□ -2.47
TGFAP01135 MIR548AE2-201ENST00000583456 67 ntBASIC-0.4□□□□□ -2.47
TGFAP01135 uc_338.28-201ENST00000612082 187 ntBASIC-0.4□□□□□ -2.47
TGFAP01135 Y_RNA.52-201ENST00000362760 96 ntBASIC-0.41□□□□□ -2.48
TGFAP01135 Y_RNA.54-201ENST00000362766 105 ntBASIC-0.41□□□□□ -2.48
TGFAP01135 Y_RNA.76-201ENST00000362931 109 ntBASIC-0.41□□□□□ -2.48
TGFAP01135 RNU6-867P-201ENST00000364956 107 ntBASIC-0.41□□□□□ -2.48
TGFAP01135 Y_RNA.308-201ENST00000365043 101 ntBASIC-0.41□□□□□ -2.48
TGFAP01135 Y_RNA.357-201ENST00000365487 109 ntBASIC-0.41□□□□□ -2.48
TGFAP01135 MIR196A2-201ENST00000385189 110 ntBASIC-0.41□□□□□ -2.48
TGFAP01135 MIR548H3-201ENST00000408771 118 ntBASIC-0.41□□□□□ -2.48
TGFAP01135 RNA5SP451-201ENST00000410588 110 ntBASIC-0.41□□□□□ -2.48
TGFAP01135 RNA5SP236-201ENST00000516169 116 ntBASIC-0.41□□□□□ -2.48
TGFAP01135 MIR548AZ-201ENST00000616567 95 ntBASIC-0.41□□□□□ -2.48
TGFAP01135 SNORD95.1-201ENST00000364099 68 ntBASIC-0.42□□□□□ -2.48
TGFAP01135 SNORD114-15-201ENST00000364687 72 ntBASIC-0.42□□□□□ -2.48
TGFAP01135 Y_RNA.277-201ENST00000364754 102 ntBASIC-0.42□□□□□ -2.48
TGFAP01135 RNU6-275P-201ENST00000364910 107 ntBASIC-0.42□□□□□ -2.48
TGFAP01135 RNU6-449P-201ENST00000383914 107 ntBASIC-0.42□□□□□ -2.48
TGFAP01135 MIR635-201ENST00000384830 98 ntBASIC-0.42□□□□□ -2.48
TGFAP01135 RNU6-180P-201ENST00000516697 61 ntBASIC-0.42□□□□□ -2.48
TGFAP01135 MIR4677-201ENST00000584153 80 ntBASIC-0.42□□□□□ -2.48
TGFAP01135 AL359881.1-201ENST00000602916 267 ntBASIC-0.42□□□□□ -2.48
TGFAP01135 uc_338.36-201ENST00000622331 158 ntBASIC-0.42□□□□□ -2.48
TGFAP01135 Y_RNA.299-201ENST00000364973 94 ntBASIC-0.43□□□□□ -2.48
TGFAP01135 RNU6-472P-201ENST00000384299 107 ntBASIC-0.43□□□□□ -2.48
TGFAP01135 RNU6-1184P-201ENST00000384588 108 ntBASIC-0.43□□□□□ -2.48
TGFAP01135 Y_RNA.571-201ENST00000384753 98 ntBASIC-0.43□□□□□ -2.48
TGFAP01135 Y_RNA.574-201ENST00000384766 95 ntBASIC-0.43□□□□□ -2.48
TGFAP01135 RNA5SP300-201ENST00000391197 107 ntBASIC-0.43□□□□□ -2.48
TGFAP01135 SNORD75.1-201ENST00000408373 60 ntBASIC-0.43□□□□□ -2.48
TGFAP01135 AC097635.1-201ENST00000450678 155 ntBASIC-0.43□□□□□ -2.48
TGFAP01135 IGHVII-40-1-201ENST00000517316 58 ntBASIC-0.43□□□□□ -2.48
TGFAP01135 MIR3925-201ENST00000584674 77 ntBASIC-0.43□□□□□ -2.48
TGFAP01135 AC006504.6-201ENST00000590142 199 ntBASIC-0.43□□□□□ -2.48
TGFAP01135 RNU6-238P-201ENST00000363313 106 ntBASIC-0.44□□□□□ -2.48
TGFAP01135 RNU6-509P-201ENST00000363519 107 ntBASIC-0.44□□□□□ -2.48
TGFAP01135 Y_RNA.182-201ENST00000363880 111 ntBASIC-0.44□□□□□ -2.48
TGFAP01135 RNY4P28-201ENST00000365281 93 ntBASIC-0.44□□□□□ -2.48
TGFAP01135 Y_RNA.521-201ENST00000384560 114 ntBASIC-0.44□□□□□ -2.48
TGFAP01135 RNU6-493P-201ENST00000391321 108 ntBASIC-0.44□□□□□ -2.48
TGFAP01135 AC023051.1-201ENST00000414098 876 ntTSL 5 BASIC-0.44□□□□□ -2.48
TGFAP01135 RPS29P8-201ENST00000445109 171 ntBASIC-0.44□□□□□ -2.48
TGFAP01135 Y_RNA.696-201ENST00000516725 107 ntBASIC-0.44□□□□□ -2.48
TGFAP01135 Y_RNA.701-201ENST00000516812 110 ntBASIC-0.44□□□□□ -2.48
TGFAP01135 SNORD49B-201ENST00000365172 72 ntBASIC-0.45□□□□□ -2.48
TGFAP01135 MTATP6P21-201ENST00000440681 189 ntBASIC-0.45□□□□□ -2.48
TGFAP01135 SNORD126-201ENST00000459475 77 ntBASIC-0.45□□□□□ -2.48
TGFAP01135 RNY3P16-201ENST00000516338 101 ntBASIC-0.45□□□□□ -2.48
TGFAP01135 SCARNA11.2-201ENST00000517183 154 ntBASIC-0.45□□□□□ -2.48
TGFAP01135 RN7SL660P-201ENST00000614852 299 ntBASIC-0.45□□□□□ -2.48
TGFAP01135 AC105081.1-201ENST00000617727 106 ntBASIC-0.45□□□□□ -2.48
TGFAP01135 RNU6-1227P-201ENST00000383981 107 ntBASIC-0.46□□□□□ -2.48
TGFAP01135 MIR599-201ENST00000385069 95 ntBASIC-0.46□□□□□ -2.48
TGFAP01135 Y_RNA.720-201ENST00000517166 92 ntBASIC-0.46□□□□□ -2.48
TGFAP01135 DEFB131B-201ENST00000530210 213 ntAPPRIS P1 TSL 1 (best) BASIC-0.46□□□□□ -2.48
TGFAP01135 CR383656.4-201ENST00000546909 122 ntBASIC-0.46□□□□□ -2.48
TGFAP01135 MTRNR2L2-201ENST00000604882 87 ntBASIC-0.46□□□□□ -2.48
TGFAP01135 MIR3666-201ENST00000607845 111 ntBASIC-0.46□□□□□ -2.48
TGFAP01135 MIR148A-201ENST00000362215 68 ntBASIC-0.47□□□□□ -2.48
TGFAP01135 RNU6-797P-201ENST00000363101 109 ntBASIC-0.47□□□□□ -2.48
TGFAP01135 MIR224-201ENST00000384889 81 ntBASIC-0.47□□□□□ -2.48
TGFAP01135 MIR548I2-201ENST00000408348 149 ntBASIC-0.47□□□□□ -2.48
TGFAP01135 AC006210.1-201ENST00000424882 111 ntBASIC-0.47□□□□□ -2.48
TGFAP01135 AC138907.4-201ENST00000570107 226 ntBASIC-0.47□□□□□ -2.48
TGFAP01135 CLRN1-AS1.1-201ENST00000615643 79 ntBASIC-0.47□□□□□ -2.48
TGFAP01135 FTX_2.1-201ENST00000618816 94 ntBASIC-0.47□□□□□ -2.48
TGFAP01135 CCDC7-215ENST00000639629 4158 ntAPPRIS ALT2 TSL 5 BASIC-0.47□□□□□ -2.48
TGFAP01135 Y_RNA.75-201ENST00000362927 97 ntBASIC-0.48□□□□□ -2.49
TGFAP01135 Y_RNA.125-201ENST00000363371 111 ntBASIC-0.48□□□□□ -2.49
TGFAP01135 RNU4-69P-201ENST00000410677 143 ntBASIC-0.48□□□□□ -2.49
TGFAP01135 RNU7-74P-201ENST00000459104 62 ntBASIC-0.48□□□□□ -2.49
Retrieved 100 of 98,524 protein–RNA pairs in 202.1 ms