Protein–RNA interactions for Protein: P00352

ALDH1A1, Retinal dehydrogenase 1, humanhuman

Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALDH1A1P00352 TP73-AS1.1-201ENST00000611447 161 ntBASIC2.65□□□□□ -1.99
ALDH1A1P00352 RNU6-340P-201ENST00000364005 107 ntBASIC2.64□□□□□ -1.99
ALDH1A1P00352 RNU6-1051P-201ENST00000365471 102 ntBASIC2.64□□□□□ -1.99
ALDH1A1P00352 MIR1287-201ENST00000408492 90 ntBASIC2.64□□□□□ -1.99
ALDH1A1P00352 RNU6-1165P-201ENST00000410119 107 ntBASIC2.64□□□□□ -1.99
ALDH1A1P00352 RNA5SP100-201ENST00000410903 110 ntBASIC2.64□□□□□ -1.99
ALDH1A1P00352 RNA5SP59-201ENST00000410922 110 ntBASIC2.64□□□□□ -1.99
ALDH1A1P00352 5S_rRNA.3-201ENST00000517021 110 ntBASIC2.64□□□□□ -1.99
ALDH1A1P00352 5S_rRNA.19-201ENST00000612131 110 ntBASIC2.64□□□□□ -1.99
ALDH1A1P00352 5S_rRNA.18-201ENST00000621941 110 ntBASIC2.64□□□□□ -1.99
ALDH1A1P00352 NAALADL2-203ENST00000454872 9865 ntAPPRIS P1 TSL 1 (best) BASIC2.64□□□□□ -1.99
ALDH1A1P00352 AKAP9-203ENST00000359028 12247 ntAPPRIS ALT2 TSL 5 BASIC2.64□□□□□ -1.99
ALDH1A1P00352 RNU6-499P-201ENST00000365615 107 ntBASIC2.63□□□□□ -1.99
ALDH1A1P00352 MIR194-1-201ENST00000384892 85 ntBASIC2.63□□□□□ -1.99
ALDH1A1P00352 RNU6-360P-201ENST00000390944 104 ntBASIC2.63□□□□□ -1.99
ALDH1A1P00352 SUMO1P4-201ENST00000429430 302 ntBASIC2.63□□□□□ -1.99
ALDH1A1P00352 AC078980.1-201ENST00000485384 262 ntTSL 2 BASIC2.63□□□□□ -1.99
ALDH1A1P00352 ZNF654-201ENST00000309495 4957 ntAPPRIS P2 TSL 1 (best) BASIC2.63□□□□□ -1.99
ALDH1A1P00352 DYNC2H1-202ENST00000375735 13678 ntAPPRIS ALT1 TSL 1 (best) BASIC2.62□□□□□ -1.99
ALDH1A1P00352 Y_RNA.207-201ENST00000364142 106 ntBASIC2.62□□□□□ -1.99
ALDH1A1P00352 AC244636.1-201ENST00000421152 228 ntBASIC2.62□□□□□ -1.99
ALDH1A1P00352 SNORD111.1-201ENST00000516421 86 ntBASIC2.62□□□□□ -1.99
ALDH1A1P00352 RNU6-531P-201ENST00000516694 104 ntBASIC2.62□□□□□ -1.99
ALDH1A1P00352 MIR4264-201ENST00000583520 66 ntBASIC2.62□□□□□ -1.99
ALDH1A1P00352 MIR3192-201ENST00000584920 77 ntBASIC2.62□□□□□ -1.99
ALDH1A1P00352 TRAJ36-201ENST00000614481 58 ntAPPRIS P1 BASIC2.62□□□□□ -1.99
ALDH1A1P00352 RNU6-630P-201ENST00000391258 106 ntBASIC2.61□□□□□ -1.99
ALDH1A1P00352 AC022596.1-201ENST00000582895 302 ntTSL 5 BASIC2.61□□□□□ -1.99
ALDH1A1P00352 MIR6132-201ENST00000622083 109 ntBASIC2.61□□□□□ -1.99
ALDH1A1P00352 SACS-201ENST00000382292 15324 ntAPPRIS P1 TSL 5 BASIC2.61□□□□□ -1.99
ALDH1A1P00352 BRDT-206ENST00000402388 3125 ntAPPRIS P3 TSL 1 (best) BASIC2.6□□□□□ -1.99
ALDH1A1P00352 MACC1-202ENST00000400331 9159 ntAPPRIS P1 TSL 2 BASIC2.6□□□□□ -1.99
ALDH1A1P00352 RNU6-396P-201ENST00000365369 105 ntBASIC2.6□□□□□ -1.99
ALDH1A1P00352 Y_RNA.371-201ENST00000365591 113 ntBASIC2.6□□□□□ -1.99
ALDH1A1P00352 MIR221-201ENST00000385135 110 ntBASIC2.6□□□□□ -1.99
ALDH1A1P00352 MT-TF-201ENST00000387314 71 ntBASIC2.6□□□□□ -1.99
ALDH1A1P00352 RNU6-205P-201ENST00000390858 107 ntBASIC2.6□□□□□ -1.99
ALDH1A1P00352 AC004965.1-201ENST00000413033 213 ntBASIC2.6□□□□□ -1.99
ALDH1A1P00352 SNORA31.17-201ENST00000516953 127 ntBASIC2.6□□□□□ -1.99
ALDH1A1P00352 MIR4491-201ENST00000581087 68 ntBASIC2.6□□□□□ -1.99
ALDH1A1P00352 MIR5194-201ENST00000582634 120 ntBASIC2.6□□□□□ -1.99
ALDH1A1P00352 uc_338.6-201ENST00000613544 171 ntBASIC2.6□□□□□ -1.99
ALDH1A1P00352 XPO4-202ENST00000400602 9884 ntAPPRIS ALT1 TSL 5 BASIC2.6□□□□□ -1.99
ALDH1A1P00352 ZNF355P-201ENST00000427301 3216 ntBASIC2.59□□□□□ -1.99
ALDH1A1P00352 RNU1-17P-201ENST00000363022 152 ntBASIC2.59□□□□□ -1.99
ALDH1A1P00352 RNU4-58P-201ENST00000363192 141 ntBASIC2.59□□□□□ -1.99
ALDH1A1P00352 RNU1-51P-201ENST00000365345 176 ntBASIC2.59□□□□□ -1.99
ALDH1A1P00352 SNORA67.3-201ENST00000384366 140 ntBASIC2.59□□□□□ -1.99
ALDH1A1P00352 SNORD41-201ENST00000386967 70 ntBASIC2.59□□□□□ -1.99
ALDH1A1P00352 MIR2113-201ENST00000459007 91 ntBASIC2.59□□□□□ -1.99
ALDH1A1P00352 SNORA25.16-201ENST00000516741 121 ntBASIC2.59□□□□□ -1.99
ALDH1A1P00352 U1.36-201ENST00000620684 176 ntBASIC2.59□□□□□ -1.99
ALDH1A1P00352 RNA5SP393-201ENST00000363423 117 ntBASIC2.58□□□□□ -2
ALDH1A1P00352 SNORA25.4-201ENST00000363666 124 ntBASIC2.58□□□□□ -2
ALDH1A1P00352 MT-TN-201ENST00000387400 73 ntBASIC2.58□□□□□ -2
ALDH1A1P00352 Y_RNA.588-201ENST00000391254 102 ntBASIC2.58□□□□□ -2
ALDH1A1P00352 Y_RNA.606-201ENST00000410579 103 ntBASIC2.58□□□□□ -2
ALDH1A1P00352 RNA5SP200-201ENST00000516360 103 ntBASIC2.58□□□□□ -2
ALDH1A1P00352 MIR4781-201ENST00000585250 76 ntBASIC2.58□□□□□ -2
ALDH1A1P00352 VPS35-212ENST00000640313 141 ntTSL 5 BASIC2.58□□□□□ -2
ALDH1A1P00352 ZMYM1-203ENST00000373330 4203 ntAPPRIS P1 TSL 1 (best) BASIC2.58□□□□□ -2
ALDH1A1P00352 CGGBP1-202ENST00000398392 5298 ntAPPRIS P1 BASIC2.58□□□□□ -2
ALDH1A1P00352 FGF7-206ENST00000614567 3936 ntAPPRIS P1 TSL 1 (best) BASIC2.58□□□□□ -2
ALDH1A1P00352 ATP11C-202ENST00000361648 6010 ntAPPRIS ALT2 TSL 1 (best) BASIC2.58□□□□□ -2
ALDH1A1P00352 NEDD4-205ENST00000506154 6751 ntTSL 1 (best) BASIC2.57□□□□□ -2
ALDH1A1P00352 ENAM-201ENST00000396073 5679 ntAPPRIS P1 TSL 1 (best) BASIC2.57□□□□□ -2
ALDH1A1P00352 Y_RNA.443-201ENST00000384135 111 ntBASIC2.57□□□□□ -2
ALDH1A1P00352 RNU4ATAC16P-201ENST00000408512 126 ntBASIC2.57□□□□□ -2
ALDH1A1P00352 AL606490.4-201ENST00000423117 127 ntBASIC2.57□□□□□ -2
ALDH1A1P00352 RNU7-62P-201ENST00000458856 62 ntBASIC2.57□□□□□ -2
ALDH1A1P00352 RNU11-2P-201ENST00000516898 142 ntBASIC2.57□□□□□ -2
ALDH1A1P00352 RNU2-19P-201ENST00000517288 84 ntBASIC2.57□□□□□ -2
ALDH1A1P00352 MIR3675-201ENST00000583661 73 ntBASIC2.57□□□□□ -2
ALDH1A1P00352 SNORD45A-201ENST00000384512 84 ntBASIC2.56□□□□□ -2
ALDH1A1P00352 MIR519A1-201ENST00000385257 85 ntBASIC2.56□□□□□ -2
ALDH1A1P00352 AC092628.1-201ENST00000436250 252 ntBASIC2.56□□□□□ -2
ALDH1A1P00352 RNU7-195P-201ENST00000458793 62 ntBASIC2.56□□□□□ -2
ALDH1A1P00352 RPL30P7-201ENST00000479312 323 ntBASIC2.56□□□□□ -2
ALDH1A1P00352 TRAJ51-201ENST00000504127 63 ntBASIC2.56□□□□□ -2
ALDH1A1P00352 MIR6766-201ENST00000622641 72 ntBASIC2.56□□□□□ -2
ALDH1A1P00352 UHMK1-204ENST00000545294 8117 ntTSL 2 BASIC2.56□□□□□ -2
ALDH1A1P00352 RNU6-681P-201ENST00000364012 104 ntBASIC2.55□□□□□ -2
ALDH1A1P00352 Y_RNA.239-201ENST00000364444 113 ntBASIC2.55□□□□□ -2
ALDH1A1P00352 RNY4P3-201ENST00000365254 95 ntBASIC2.55□□□□□ -2
ALDH1A1P00352 RNU6-53P-201ENST00000365367 106 ntBASIC2.55□□□□□ -2
ALDH1A1P00352 SNORD100-201ENST00000408573 76 ntBASIC2.55□□□□□ -2
ALDH1A1P00352 RPS27P16-201ENST00000425758 201 ntBASIC2.55□□□□□ -2
ALDH1A1P00352 MIR3140-201ENST00000583685 90 ntBASIC2.55□□□□□ -2
ALDH1A1P00352 ZNF209P-201ENST00000593450 2304 ntBASIC2.55□□□□□ -2
ALDH1A1P00352 TRDV1-202ENST00000621643 102 ntBASIC2.55□□□□□ -2
ALDH1A1P00352 COMMD6-213ENST00000626103 120 ntTSL 5 BASIC2.55□□□□□ -2
ALDH1A1P00352 FO624990.1-201ENST00000636373 85 ntBASIC2.55□□□□□ -2
ALDH1A1P00352 MIR337-201ENST00000362281 93 ntBASIC2.54□□□□□ -2
ALDH1A1P00352 SNORA67.1-201ENST00000364749 141 ntBASIC2.54□□□□□ -2
ALDH1A1P00352 RNU6-895P-201ENST00000384125 103 ntBASIC2.54□□□□□ -2
ALDH1A1P00352 RNU6-141P-201ENST00000410499 105 ntBASIC2.54□□□□□ -2
ALDH1A1P00352 AL161935.2-201ENST00000414627 60 ntBASIC2.54□□□□□ -2
ALDH1A1P00352 MIR4446-201ENST00000578505 67 ntBASIC2.54□□□□□ -2
ALDH1A1P00352 MIR6845-201ENST00000613182 61 ntBASIC2.54□□□□□ -2
ALDH1A1P00352 LIFR-201ENST00000263409 10089 ntAPPRIS P1 TSL 1 (best) BASIC2.54□□□□□ -2
Retrieved 100 of 98,524 protein–RNA pairs in 163.5 ms