Protein–RNA interactions for Protein: O96006

ZBED1, Zinc finger BED domain-containing protein 1, humanhuman

Predictions only

Length 694 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZBED1O96006 RNU6-531P-201ENST00000516694 104 ntBASIC0.78□□□□□ -2.28
ZBED1O96006 AC025166.1-201ENST00000612411 163 ntBASIC0.78□□□□□ -2.28
ZBED1O96006 MIR101-2-201ENST00000362195 79 ntBASIC0.77□□□□□ -2.29
ZBED1O96006 SNORD50.2-201ENST00000365465 70 ntBASIC0.77□□□□□ -2.29
ZBED1O96006 Y_RNA.448-201ENST00000384185 108 ntBASIC0.77□□□□□ -2.29
ZBED1O96006 RNU6-616P-201ENST00000384353 107 ntBASIC0.77□□□□□ -2.29
ZBED1O96006 MIR140-201ENST00000385282 100 ntBASIC0.77□□□□□ -2.29
ZBED1O96006 AL162399.1-201ENST00000426090 130 ntTSL 3 BASIC0.77□□□□□ -2.29
ZBED1O96006 RNU7-2P-201ENST00000516096 62 ntBASIC0.77□□□□□ -2.29
ZBED1O96006 AC138749.4-201ENST00000563970 127 ntBASIC0.77□□□□□ -2.29
ZBED1O96006 Y_RNA.98-201ENST00000363109 102 ntBASIC0.76□□□□□ -2.29
ZBED1O96006 Y_RNA.119-201ENST00000363301 96 ntBASIC0.76□□□□□ -2.29
ZBED1O96006 Y_RNA.174-201ENST00000363781 105 ntBASIC0.76□□□□□ -2.29
ZBED1O96006 RNU6-865P-201ENST00000364772 107 ntBASIC0.76□□□□□ -2.29
ZBED1O96006 RNY1P2-201ENST00000364820 117 ntBASIC0.76□□□□□ -2.29
ZBED1O96006 SNORD58C-201ENST00000365223 64 ntBASIC0.76□□□□□ -2.29
ZBED1O96006 TRAJ22-201ENST00000390515 63 ntAPPRIS P1 BASIC0.76□□□□□ -2.29
ZBED1O96006 RNU6-1321P-201ENST00000390905 107 ntBASIC0.76□□□□□ -2.29
ZBED1O96006 RNU7-48P-201ENST00000458875 63 ntBASIC0.76□□□□□ -2.29
ZBED1O96006 RNU6-971P-201ENST00000516920 106 ntBASIC0.76□□□□□ -2.29
ZBED1O96006 MIR151B-201ENST00000584249 96 ntBASIC0.76□□□□□ -2.29
ZBED1O96006 MIR6835-201ENST00000621552 64 ntBASIC0.76□□□□□ -2.29
ZBED1O96006 HSBP1P2-201ENST00000299671 229 ntBASIC0.75□□□□□ -2.29
ZBED1O96006 Y_RNA.116-201ENST00000363292 103 ntBASIC0.75□□□□□ -2.29
ZBED1O96006 Y_RNA.346-201ENST00000365385 112 ntBASIC0.75□□□□□ -2.29
ZBED1O96006 Y_RNA.536-201ENST00000384621 113 ntBASIC0.75□□□□□ -2.29
ZBED1O96006 RNU6-535P-201ENST00000384722 107 ntBASIC0.75□□□□□ -2.29
ZBED1O96006 TRAJ1-201ENST00000390536 62 ntAPPRIS P1 BASIC0.75□□□□□ -2.29
ZBED1O96006 RNU6ATAC31P-201ENST00000408513 126 ntBASIC0.75□□□□□ -2.29
ZBED1O96006 AL590095.2-201ENST00000604136 117 ntBASIC0.75□□□□□ -2.29
ZBED1O96006 C18orf54-201ENST00000300091 5237 ntAPPRIS P1 TSL 1 (best) BASIC0.74□□□□□ -2.29
ZBED1O96006 RNU6-679P-201ENST00000391003 106 ntBASIC0.74□□□□□ -2.29
ZBED1O96006 RNU6-772P-201ENST00000516042 105 ntBASIC0.74□□□□□ -2.29
ZBED1O96006 MTND5P34-201ENST00000568888 325 ntBASIC0.74□□□□□ -2.29
ZBED1O96006 AL078603.1-201ENST00000603824 313 ntBASIC0.74□□□□□ -2.29
ZBED1O96006 AC087741.2-201ENST00000619415 172 ntBASIC0.74□□□□□ -2.29
ZBED1O96006 RNU6-704P-201ENST00000364162 103 ntBASIC0.73□□□□□ -2.29
ZBED1O96006 uc_338.16-201ENST00000621804 95 ntBASIC0.73□□□□□ -2.29
ZBED1O96006 AL157777.2-201ENST00000258070 137 ntBASIC0.72□□□□□ -2.29
ZBED1O96006 SNORD115-19-201ENST00000363098 82 ntBASIC0.72□□□□□ -2.29
ZBED1O96006 SNORD115-18-201ENST00000363293 82 ntBASIC0.72□□□□□ -2.29
ZBED1O96006 RNY4P6-201ENST00000363667 96 ntBASIC0.72□□□□□ -2.29
ZBED1O96006 SNORD115-17-201ENST00000364612 82 ntBASIC0.72□□□□□ -2.29
ZBED1O96006 SNORD115-35-201ENST00000365122 82 ntBASIC0.72□□□□□ -2.29
ZBED1O96006 RNY1P8-201ENST00000383970 114 ntBASIC0.72□□□□□ -2.29
ZBED1O96006 RNU6-429P-201ENST00000384582 108 ntBASIC0.72□□□□□ -2.29
ZBED1O96006 RNU6-291P-201ENST00000384720 107 ntBASIC0.72□□□□□ -2.29
ZBED1O96006 MIR508-201ENST00000384857 115 ntBASIC0.72□□□□□ -2.29
ZBED1O96006 MT-TI-201ENST00000387365 69 ntBASIC0.72□□□□□ -2.29
ZBED1O96006 AC138907.6-201ENST00000568401 126 ntBASIC0.72□□□□□ -2.29
ZBED1O96006 MIR3678-201ENST00000578455 94 ntBASIC0.72□□□□□ -2.29
ZBED1O96006 NEAT1_2.1-201ENST00000620525 105 ntBASIC0.72□□□□□ -2.29
ZBED1O96006 AP001362.1-201ENST00000625165 124 ntBASIC0.72□□□□□ -2.29
ZBED1O96006 MTND5P18-201ENST00000445624 1801 ntBASIC0.72□□□□□ -2.29
ZBED1O96006 Y_RNA.328-201ENST00000365208 113 ntBASIC0.71□□□□□ -2.3
ZBED1O96006 RNU6-187P-201ENST00000384139 106 ntBASIC0.71□□□□□ -2.3
ZBED1O96006 RNU6-80P-201ENST00000384195 107 ntBASIC0.71□□□□□ -2.3
ZBED1O96006 MIR548D2-201ENST00000384955 97 ntBASIC0.71□□□□□ -2.3
ZBED1O96006 MIRLET7F2-201ENST00000385277 83 ntBASIC0.71□□□□□ -2.3
ZBED1O96006 RNU6ATAC20P-201ENST00000408436 127 ntBASIC0.71□□□□□ -2.3
ZBED1O96006 RNA5SP220-201ENST00000516298 104 ntBASIC0.71□□□□□ -2.3
ZBED1O96006 RNA5SP121-201ENST00000516537 101 ntBASIC0.71□□□□□ -2.3
ZBED1O96006 RNU6-135P-201ENST00000516769 101 ntBASIC0.71□□□□□ -2.3
ZBED1O96006 RNU6-1223P-201ENST00000517124 104 ntBASIC0.71□□□□□ -2.3
ZBED1O96006 Y_RNA.32-201ENST00000362589 110 ntBASIC0.7□□□□□ -2.3
ZBED1O96006 MIR518E-201ENST00000385252 88 ntBASIC0.7□□□□□ -2.3
ZBED1O96006 ATP6V0E1P1-201ENST00000412537 226 ntBASIC0.7□□□□□ -2.3
ZBED1O96006 SNORA31.14-201ENST00000516728 116 ntBASIC0.7□□□□□ -2.3
ZBED1O96006 AC018659.1-201ENST00000551083 169 ntBASIC0.7□□□□□ -2.3
ZBED1O96006 MIR4500-201ENST00000579472 76 ntBASIC0.7□□□□□ -2.3
ZBED1O96006 RNU6-945P-201ENST00000383947 107 ntBASIC0.69□□□□□ -2.3
ZBED1O96006 MIR644A-201ENST00000385262 94 ntBASIC0.69□□□□□ -2.3
ZBED1O96006 RNU6ATAC41P-201ENST00000408600 126 ntBASIC0.69□□□□□ -2.3
ZBED1O96006 RNU6-1234P-201ENST00000516877 103 ntBASIC0.69□□□□□ -2.3
ZBED1O96006 MIR5000-201ENST00000577717 103 ntBASIC0.69□□□□□ -2.3
ZBED1O96006 MIR4714-201ENST00000580728 77 ntBASIC0.69□□□□□ -2.3
ZBED1O96006 RNU7-10P-201ENST00000607194 63 ntBASIC0.69□□□□□ -2.3
ZBED1O96006 AC092634.7-201ENST00000621022 103 ntBASIC0.69□□□□□ -2.3
ZBED1O96006 RNU6-1229P-201ENST00000364295 107 ntBASIC0.68□□□□□ -2.3
ZBED1O96006 RNU7-107P-201ENST00000459121 61 ntBASIC0.68□□□□□ -2.3
ZBED1O96006 RNU4-54P-201ENST00000516428 129 ntBASIC0.68□□□□□ -2.3
ZBED1O96006 RNU6-521P-201ENST00000516663 105 ntBASIC0.68□□□□□ -2.3
ZBED1O96006 MIR548H5-201ENST00000580314 60 ntBASIC0.68□□□□□ -2.3
ZBED1O96006 Y_RNA.773-201ENST00000607168 90 ntBASIC0.68□□□□□ -2.3
ZBED1O96006 Y_RNA.56-201ENST00000362798 112 ntBASIC0.67□□□□□ -2.3
ZBED1O96006 RNU6-42P-201ENST00000384165 107 ntBASIC0.67□□□□□ -2.3
ZBED1O96006 Y_RNA.567-201ENST00000384736 106 ntBASIC0.67□□□□□ -2.3
ZBED1O96006 RNU6-735P-201ENST00000410612 107 ntBASIC0.67□□□□□ -2.3
ZBED1O96006 RNA5SP94-201ENST00000516917 108 ntBASIC0.67□□□□□ -2.3
ZBED1O96006 FAM19A1-204ENST00000617084 159 ntTSL 5 BASIC0.67□□□□□ -2.3
ZBED1O96006 Y_RNA.127-201ENST00000363386 109 ntBASIC0.66□□□□□ -2.3
ZBED1O96006 SNORD38.2-201ENST00000384470 69 ntBASIC0.66□□□□□ -2.3
ZBED1O96006 MIR6734-201ENST00000621166 68 ntBASIC0.66□□□□□ -2.3
ZBED1O96006 Y_RNA.507-201ENST00000384500 99 ntBASIC0.65□□□□□ -2.31
ZBED1O96006 RNU6-1307P-201ENST00000391012 103 ntBASIC0.65□□□□□ -2.31
ZBED1O96006 RNU6-733P-201ENST00000410759 104 ntBASIC0.65□□□□□ -2.31
ZBED1O96006 SNORD71-201ENST00000411292 86 ntBASIC0.65□□□□□ -2.31
ZBED1O96006 Y_RNA.630-201ENST00000411370 108 ntBASIC0.65□□□□□ -2.31
ZBED1O96006 MIR376B-201ENST00000614515 100 ntBASIC0.65□□□□□ -2.31
ZBED1O96006 MIR1255B1-201ENST00000636325 63 ntBASIC0.65□□□□□ -2.31
Retrieved 100 of 98,524 protein–RNA pairs in 176.1 ms