Protein–RNA interactions for Protein: O95832

CLDN1, Claudin-1, humanhuman

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN1O95832 MIR8066-201ENST00000617280 78 ntBASIC0.7□□□□□ -2.3
CLDN1O95832 Y_RNA.42-201ENST00000362660 108 ntBASIC0.69□□□□□ -2.3
CLDN1O95832 SNORD115-19-201ENST00000363098 82 ntBASIC0.69□□□□□ -2.3
CLDN1O95832 SNORD115-18-201ENST00000363293 82 ntBASIC0.69□□□□□ -2.3
CLDN1O95832 SNORD115-17-201ENST00000364612 82 ntBASIC0.69□□□□□ -2.3
CLDN1O95832 SNORA32-201ENST00000384072 121 ntBASIC0.69□□□□□ -2.3
CLDN1O95832 RNU6-80P-201ENST00000384195 107 ntBASIC0.69□□□□□ -2.3
CLDN1O95832 MIR938-201ENST00000401216 83 ntBASIC0.69□□□□□ -2.3
CLDN1O95832 PSMC1P5-201ENST00000512850 177 ntBASIC0.69□□□□□ -2.3
CLDN1O95832 RNU6-772P-201ENST00000516042 105 ntBASIC0.69□□□□□ -2.3
CLDN1O95832 RNU6-977P-201ENST00000516411 103 ntBASIC0.69□□□□□ -2.3
CLDN1O95832 RNU6-971P-201ENST00000516920 106 ntBASIC0.69□□□□□ -2.3
CLDN1O95832 AL359881.1-201ENST00000602916 267 ntBASIC0.69□□□□□ -2.3
CLDN1O95832 FAM13A-AS1_1.1-201ENST00000612555 119 ntBASIC0.69□□□□□ -2.3
CLDN1O95832 AL589743.1-201ENST00000551932 2712 ntBASIC0.69□□□□□ -2.3
CLDN1O95832 RNU6-235P-201ENST00000362644 107 ntBASIC0.68□□□□□ -2.3
CLDN1O95832 SNORD114-10-201ENST00000363409 72 ntBASIC0.68□□□□□ -2.3
CLDN1O95832 Y_RNA.218-201ENST00000364218 104 ntBASIC0.68□□□□□ -2.3
CLDN1O95832 RNU6-81P-201ENST00000365608 104 ntBASIC0.68□□□□□ -2.3
CLDN1O95832 IL6ST-202ENST00000381286 201 ntTSL 1 (best) BASIC0.68□□□□□ -2.3
CLDN1O95832 RNU6-35P-201ENST00000384530 107 ntBASIC0.68□□□□□ -2.3
CLDN1O95832 MIR520F-201ENST00000384824 87 ntBASIC0.68□□□□□ -2.3
CLDN1O95832 TRAJ1-201ENST00000390536 62 ntAPPRIS P1 BASIC0.68□□□□□ -2.3
CLDN1O95832 RNU6ATAC27P-201ENST00000408289 119 ntBASIC0.68□□□□□ -2.3
CLDN1O95832 TMSB4XP3-201ENST00000445144 114 ntBASIC0.68□□□□□ -2.3
CLDN1O95832 RNU6-351P-201ENST00000516097 100 ntBASIC0.68□□□□□ -2.3
CLDN1O95832 RNU6-765P-201ENST00000516916 99 ntBASIC0.68□□□□□ -2.3
CLDN1O95832 Y_RNA.712-201ENST00000517011 92 ntBASIC0.68□□□□□ -2.3
CLDN1O95832 MIR608-201ENST00000384820 100 ntBASIC0.67□□□□□ -2.3
CLDN1O95832 MIR573-201ENST00000384964 99 ntBASIC0.67□□□□□ -2.3
CLDN1O95832 SNORD67.1-201ENST00000516618 108 ntBASIC0.67□□□□□ -2.3
CLDN1O95832 AP003327.1-201ENST00000529684 127 ntBASIC0.67□□□□□ -2.3
CLDN1O95832 MIR3163-201ENST00000581592 73 ntBASIC0.67□□□□□ -2.3
CLDN1O95832 MIR4653-201ENST00000585107 83 ntBASIC0.67□□□□□ -2.3
CLDN1O95832 MIR2909-201ENST00000617113 69 ntBASIC0.67□□□□□ -2.3
CLDN1O95832 AC087741.2-201ENST00000619415 172 ntBASIC0.67□□□□□ -2.3
CLDN1O95832 Y_RNA.213-201ENST00000364178 111 ntBASIC0.66□□□□□ -2.3
CLDN1O95832 MIR520H-201ENST00000385126 88 ntBASIC0.66□□□□□ -2.3
CLDN1O95832 SNORD77B-201ENST00000391112 67 ntBASIC0.66□□□□□ -2.3
CLDN1O95832 SNORD93-201ENST00000408813 74 ntBASIC0.66□□□□□ -2.3
CLDN1O95832 AC244098.3-201ENST00000424803 96 ntBASIC0.66□□□□□ -2.3
CLDN1O95832 RNU7-102P-201ENST00000458948 62 ntBASIC0.66□□□□□ -2.3
CLDN1O95832 RNU6-1211P-201ENST00000459179 105 ntBASIC0.66□□□□□ -2.3
CLDN1O95832 RNU6-659P-201ENST00000516454 104 ntBASIC0.66□□□□□ -2.3
CLDN1O95832 RNU6-1234P-201ENST00000516877 103 ntBASIC0.66□□□□□ -2.3
CLDN1O95832 RNU7-156P-201ENST00000517214 74 ntBASIC0.66□□□□□ -2.3
CLDN1O95832 AC090897.1-201ENST00000580909 226 ntBASIC0.66□□□□□ -2.3
CLDN1O95832 MIR4491-201ENST00000581087 68 ntBASIC0.66□□□□□ -2.3
CLDN1O95832 AC008608.1-201ENST00000603910 127 ntBASIC0.66□□□□□ -2.3
CLDN1O95832 AC025166.1-201ENST00000612411 163 ntBASIC0.66□□□□□ -2.3
CLDN1O95832 RNA5SP347-201ENST00000362445 119 ntBASIC0.65□□□□□ -2.31
CLDN1O95832 Y_RNA.528-201ENST00000384575 108 ntBASIC0.65□□□□□ -2.31
CLDN1O95832 RNU1-119P-201ENST00000391122 165 ntBASIC0.65□□□□□ -2.31
CLDN1O95832 MIR1263-201ENST00000408324 86 ntBASIC0.65□□□□□ -2.31
CLDN1O95832 SNORD99-201ENST00000408612 74 ntBASIC0.65□□□□□ -2.31
CLDN1O95832 RNU6-735P-201ENST00000410612 107 ntBASIC0.65□□□□□ -2.31
CLDN1O95832 RNU4-83P-201ENST00000410863 133 ntBASIC0.65□□□□□ -2.31
CLDN1O95832 RPL39P25-201ENST00000449384 154 ntBASIC0.65□□□□□ -2.31
CLDN1O95832 RNU6-1194P-201ENST00000516208 104 ntBASIC0.65□□□□□ -2.31
CLDN1O95832 MIR6082-201ENST00000613604 109 ntBASIC0.65□□□□□ -2.31
CLDN1O95832 MIR3914-2-201ENST00000637339 95 ntBASIC0.65□□□□□ -2.31
CLDN1O95832 MIR6866-201ENST00000638146 69 ntBASIC0.65□□□□□ -2.31
CLDN1O95832 HSBP1P2-201ENST00000299671 229 ntBASIC0.64□□□□□ -2.31
CLDN1O95832 Y_RNA.71-201ENST00000362892 104 ntBASIC0.64□□□□□ -2.31
CLDN1O95832 SNORD113-1-201ENST00000365321 69 ntBASIC0.64□□□□□ -2.31
CLDN1O95832 SNORD116-14-201ENST00000383894 92 ntBASIC0.64□□□□□ -2.31
CLDN1O95832 SNORD116-17-201ENST00000383929 92 ntBASIC0.64□□□□□ -2.31
CLDN1O95832 SNORD116-15-201ENST00000384445 92 ntBASIC0.64□□□□□ -2.31
CLDN1O95832 RNU6-959P-201ENST00000384671 107 ntBASIC0.64□□□□□ -2.31
CLDN1O95832 SNORD116-19-201ENST00000384729 92 ntBASIC0.64□□□□□ -2.31
CLDN1O95832 MIR206-201ENST00000384872 86 ntBASIC0.64□□□□□ -2.31
CLDN1O95832 SNORD100-201ENST00000408573 76 ntBASIC0.64□□□□□ -2.31
CLDN1O95832 RNU6-447P-201ENST00000410293 104 ntBASIC0.64□□□□□ -2.31
CLDN1O95832 RNU6-1118P-201ENST00000410382 104 ntBASIC0.64□□□□□ -2.31
CLDN1O95832 RNU6-1076P-201ENST00000410397 104 ntBASIC0.64□□□□□ -2.31
CLDN1O95832 RNU6-355P-201ENST00000410427 104 ntBASIC0.64□□□□□ -2.31
CLDN1O95832 RNU6-791P-201ENST00000410467 104 ntBASIC0.64□□□□□ -2.31
CLDN1O95832 RNU6-705P-201ENST00000410601 104 ntBASIC0.64□□□□□ -2.31
CLDN1O95832 RNU6-1100P-201ENST00000410691 104 ntBASIC0.64□□□□□ -2.31
CLDN1O95832 RNU6-860P-201ENST00000410860 104 ntBASIC0.64□□□□□ -2.31
CLDN1O95832 RNU6-1217P-201ENST00000411276 104 ntBASIC0.64□□□□□ -2.31
CLDN1O95832 RNU6-785P-201ENST00000411324 104 ntBASIC0.64□□□□□ -2.31
CLDN1O95832 Y_RNA.630-201ENST00000411370 108 ntBASIC0.64□□□□□ -2.31
CLDN1O95832 AL606490.4-201ENST00000423117 127 ntBASIC0.64□□□□□ -2.31
CLDN1O95832 RNU7-107P-201ENST00000459121 61 ntBASIC0.64□□□□□ -2.31
CLDN1O95832 U6.90-201ENST00000614007 104 ntBASIC0.64□□□□□ -2.31
CLDN1O95832 U6.70-201ENST00000620287 104 ntBASIC0.64□□□□□ -2.31
CLDN1O95832 AC243829.3-201ENST00000622177 108 ntBASIC0.64□□□□□ -2.31
CLDN1O95832 MTND5P18-201ENST00000445624 1801 ntBASIC0.64□□□□□ -2.31
CLDN1O95832 RNY1P2-201ENST00000364820 117 ntBASIC0.63□□□□□ -2.31
CLDN1O95832 Y_RNA.346-201ENST00000365385 112 ntBASIC0.63□□□□□ -2.31
CLDN1O95832 RNU6-364P-201ENST00000384387 107 ntBASIC0.63□□□□□ -2.31
CLDN1O95832 MIR605-201ENST00000385078 83 ntBASIC0.63□□□□□ -2.31
CLDN1O95832 RNU6-1061P-201ENST00000516530 99 ntBASIC0.63□□□□□ -2.31
CLDN1O95832 AC138749.4-201ENST00000563970 127 ntBASIC0.63□□□□□ -2.31
CLDN1O95832 ZBTB41-201ENST00000367405 8478 ntAPPRIS P1 TSL 1 (best) BASIC0.62□□□□□ -2.31
CLDN1O95832 AL157777.2-201ENST00000258070 137 ntBASIC0.62□□□□□ -2.31
CLDN1O95832 Y_RNA.13-201ENST00000362403 112 ntBASIC0.62□□□□□ -2.31
CLDN1O95832 Y_RNA.127-201ENST00000363386 109 ntBASIC0.62□□□□□ -2.31
CLDN1O95832 RNU6-616P-201ENST00000384353 107 ntBASIC0.62□□□□□ -2.31
Retrieved 100 of 98,524 protein–RNA pairs in 203.1 ms