Protein–RNA interactions for Protein: O95477

ABCA1, ATP-binding cassette sub-family A member 1, humanhuman

Predictions only

Length 2,261 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA1O95477 Y_RNA.339-201ENST00000365325 102 ntBASIC-1.22□□□□□ -2.61
ABCA1O95477 MIR628-201ENST00000385229 95 ntBASIC-1.22□□□□□ -2.61
ABCA1O95477 RNU6-1281P-201ENST00000516223 105 ntBASIC-1.22□□□□□ -2.61
ABCA1O95477 MIR4500-201ENST00000579472 76 ntBASIC-1.22□□□□□ -2.61
ABCA1O95477 MIR376A2-201ENST00000636782 80 ntBASIC-1.22□□□□□ -2.61
ABCA1O95477 Y_RNA.103-201ENST00000363171 102 ntBASIC-1.23□□□□□ -2.61
ABCA1O95477 Y_RNA.105-201ENST00000363182 111 ntBASIC-1.23□□□□□ -2.61
ABCA1O95477 Y_RNA.424-201ENST00000384063 103 ntBASIC-1.23□□□□□ -2.61
ABCA1O95477 RNU6-510P-201ENST00000391239 108 ntBASIC-1.23□□□□□ -2.61
ABCA1O95477 RNU6-592P-201ENST00000411333 103 ntBASIC-1.23□□□□□ -2.61
ABCA1O95477 AC069023.1-201ENST00000442231 221 ntTSL 3 BASIC-1.23□□□□□ -2.61
ABCA1O95477 MIR4460-201ENST00000577862 86 ntBASIC-1.23□□□□□ -2.61
ABCA1O95477 snoU2_19.2-201ENST00000363024 80 ntBASIC-1.23□□□□□ -2.61
ABCA1O95477 SNORD114-4-201ENST00000363962 75 ntBASIC-1.23□□□□□ -2.61
ABCA1O95477 RNU4-10P-201ENST00000364383 140 ntBASIC-1.23□□□□□ -2.61
ABCA1O95477 Y_RNA.315-201ENST00000365117 102 ntBASIC-1.23□□□□□ -2.61
ABCA1O95477 MIR206-201ENST00000384872 86 ntBASIC-1.23□□□□□ -2.61
ABCA1O95477 Y_RNA.594-201ENST00000410373 140 ntBASIC-1.23□□□□□ -2.61
ABCA1O95477 RN7SKP298-201ENST00000515950 94 ntBASIC-1.23□□□□□ -2.61
ABCA1O95477 RNU7-137P-201ENST00000516788 62 ntBASIC-1.23□□□□□ -2.61
ABCA1O95477 MIR4464-201ENST00000580818 92 ntBASIC-1.23□□□□□ -2.61
ABCA1O95477 AC006504.6-201ENST00000590142 199 ntBASIC-1.23□□□□□ -2.61
ABCA1O95477 RNU6-1205P-201ENST00000363625 106 ntBASIC-1.24□□□□□ -2.61
ABCA1O95477 RNU6-308P-201ENST00000390957 107 ntBASIC-1.24□□□□□ -2.61
ABCA1O95477 SNORA26.4-201ENST00000391188 123 ntBASIC-1.24□□□□□ -2.61
ABCA1O95477 PMCHL1-202ENST00000423102 261 ntBASIC-1.24□□□□□ -2.61
ABCA1O95477 MIR5688-201ENST00000580619 83 ntBASIC-1.24□□□□□ -2.61
ABCA1O95477 MIR548AG2-201ENST00000581228 64 ntBASIC-1.24□□□□□ -2.61
ABCA1O95477 FAM13A-AS1_1.1-201ENST00000612555 119 ntBASIC-1.24□□□□□ -2.61
ABCA1O95477 AL050303.3-201ENST00000613704 284 ntBASIC-1.24□□□□□ -2.61
ABCA1O95477 DLEU2_2.2-201ENST00000615474 90 ntBASIC-1.24□□□□□ -2.61
ABCA1O95477 AC007485.1-201ENST00000616755 206 ntBASIC-1.24□□□□□ -2.61
ABCA1O95477 AL359880.1-201ENST00000621879 266 ntBASIC-1.24□□□□□ -2.61
ABCA1O95477 RNU6-1079P-201ENST00000362861 110 ntBASIC-1.24□□□□□ -2.61
ABCA1O95477 Y_RNA.175-201ENST00000363794 111 ntBASIC-1.24□□□□□ -2.61
ABCA1O95477 SNORD115-20-201ENST00000365099 82 ntBASIC-1.24□□□□□ -2.61
ABCA1O95477 RNU6-306P-201ENST00000384617 107 ntBASIC-1.24□□□□□ -2.61
ABCA1O95477 AC019235.1-201ENST00000503847 207 ntBASIC-1.24□□□□□ -2.61
ABCA1O95477 Y_RNA.704-201ENST00000516851 102 ntBASIC-1.24□□□□□ -2.61
ABCA1O95477 Y_RNA.304-201ENST00000365011 112 ntBASIC-1.25□□□□□ -2.61
ABCA1O95477 AC018880.2-201ENST00000414265 201 ntBASIC-1.25□□□□□ -2.61
ABCA1O95477 AL365203.2-201ENST00000423444 196 ntBASIC-1.25□□□□□ -2.61
ABCA1O95477 RNU6-1121P-201ENST00000516802 109 ntBASIC-1.25□□□□□ -2.61
ABCA1O95477 AP002795.1-201ENST00000534879 84 ntBASIC-1.25□□□□□ -2.61
ABCA1O95477 MIR6773-201ENST00000612812 74 ntBASIC-1.25□□□□□ -2.61
ABCA1O95477 SNORD115-33-201ENST00000363723 82 ntBASIC-1.26□□□□□ -2.61
ABCA1O95477 Y_RNA.257-201ENST00000364596 102 ntBASIC-1.26□□□□□ -2.61
ABCA1O95477 SNORA51.5-201ENST00000384126 131 ntBASIC-1.26□□□□□ -2.61
ABCA1O95477 RNU6-1013P-201ENST00000384180 107 ntBASIC-1.26□□□□□ -2.61
ABCA1O95477 Y_RNA.462-201ENST00000384268 102 ntBASIC-1.26□□□□□ -2.61
ABCA1O95477 Y_RNA.531-201ENST00000384589 121 ntBASIC-1.26□□□□□ -2.61
ABCA1O95477 AL445567.1-201ENST00000439121 144 ntBASIC-1.26□□□□□ -2.61
ABCA1O95477 RNU6-397P-201ENST00000516226 104 ntBASIC-1.26□□□□□ -2.61
ABCA1O95477 Y_RNA.708-201ENST00000516950 96 ntBASIC-1.26□□□□□ -2.61
ABCA1O95477 SNORA22.1-201ENST00000362701 134 ntBASIC-1.26□□□□□ -2.61
ABCA1O95477 Y_RNA.91-201ENST00000363042 107 ntBASIC-1.26□□□□□ -2.61
ABCA1O95477 RNU6-194P-201ENST00000363862 105 ntBASIC-1.26□□□□□ -2.61
ABCA1O95477 Y_RNA.525-201ENST00000384570 113 ntBASIC-1.26□□□□□ -2.61
ABCA1O95477 RNU6-780P-201ENST00000391030 104 ntBASIC-1.26□□□□□ -2.61
ABCA1O95477 RNU6-383P-201ENST00000410864 94 ntBASIC-1.26□□□□□ -2.61
ABCA1O95477 MTND5P5-201ENST00000503764 376 ntBASIC-1.26□□□□□ -2.61
ABCA1O95477 Y_RNA.691-201ENST00000516611 103 ntBASIC-1.26□□□□□ -2.61
ABCA1O95477 RNU6-1314P-201ENST00000517139 104 ntBASIC-1.26□□□□□ -2.61
ABCA1O95477 AC024909.2-201ENST00000553035 286 ntBASIC-1.26□□□□□ -2.61
ABCA1O95477 AC006006.1-201ENST00000603082 144 ntBASIC-1.26□□□□□ -2.61
ABCA1O95477 MIR1321-201ENST00000637766 79 ntBASIC-1.26□□□□□ -2.61
ABCA1O95477 Y_RNA.400-201ENST00000383963 111 ntBASIC-1.27□□□□□ -2.61
ABCA1O95477 RNU4-88P-201ENST00000411220 86 ntBASIC-1.27□□□□□ -2.61
ABCA1O95477 AC009161.1-201ENST00000417306 376 ntBASIC-1.27□□□□□ -2.61
ABCA1O95477 AL353691.2-201ENST00000443795 59 ntBASIC-1.27□□□□□ -2.61
ABCA1O95477 RNU4ATAC4P-201ENST00000516307 126 ntBASIC-1.27□□□□□ -2.61
ABCA1O95477 AC060788.1-201ENST00000521318 469 ntBASIC-1.27□□□□□ -2.61
ABCA1O95477 AC005014.2-201ENST00000607795 599 ntBASIC-1.27□□□□□ -2.61
ABCA1O95477 AC090617.10-201ENST00000624308 134 ntBASIC-1.27□□□□□ -2.61
ABCA1O95477 Y_RNA.353-201ENST00000365440 108 ntBASIC-1.27□□□□□ -2.61
ABCA1O95477 Y_RNA.402-201ENST00000383972 102 ntBASIC-1.27□□□□□ -2.61
ABCA1O95477 AC107973.1-201ENST00000530249 576 ntTSL 4 BASIC-1.27□□□□□ -2.61
ABCA1O95477 AC005014.3-201ENST00000605985 190 ntBASIC-1.27□□□□□ -2.61
ABCA1O95477 HOTAIRM1_3.1-201ENST00000619974 59 ntBASIC-1.27□□□□□ -2.61
ABCA1O95477 AC013248.1-201ENST00000455092 232 ntTSL 3 BASIC-1.28□□□□□ -2.61
ABCA1O95477 ATP1B3-AS1-201ENST00000492725 376 ntTSL 5 BASIC-1.28□□□□□ -2.61
ABCA1O95477 RNU7-110P-201ENST00000516891 62 ntBASIC-1.28□□□□□ -2.61
ABCA1O95477 AC021443.1-201ENST00000604478 211 ntBASIC-1.28□□□□□ -2.61
ABCA1O95477 MTND5P26-201ENST00000426018 1752 ntBASIC-1.28□□□□□ -2.61
ABCA1O95477 Y_RNA.23-201ENST00000362496 106 ntBASIC-1.28□□□□□ -2.61
ABCA1O95477 Y_RNA.340-201ENST00000365330 92 ntBASIC-1.28□□□□□ -2.61
ABCA1O95477 RNU7-48P-201ENST00000458875 63 ntBASIC-1.28□□□□□ -2.61
ABCA1O95477 MIR4790-201ENST00000577799 79 ntBASIC-1.28□□□□□ -2.61
ABCA1O95477 Y_RNA.357-201ENST00000365487 109 ntBASIC-1.29□□□□□ -2.62
ABCA1O95477 RNU6-584P-201ENST00000410350 95 ntBASIC-1.29□□□□□ -2.62
ABCA1O95477 RPS3AP52-201ENST00000435639 297 ntBASIC-1.29□□□□□ -2.62
ABCA1O95477 AC090616.4-201ENST00000448026 115 ntBASIC-1.29□□□□□ -2.62
ABCA1O95477 FGF7P6-202ENST00000451282 293 ntBASIC-1.29□□□□□ -2.62
ABCA1O95477 RNU7-195P-201ENST00000458793 62 ntBASIC-1.29□□□□□ -2.62
ABCA1O95477 U8.20-201ENST00000459445 131 ntBASIC-1.29□□□□□ -2.62
ABCA1O95477 RNU6-453P-201ENST00000516819 85 ntBASIC-1.29□□□□□ -2.62
ABCA1O95477 SNORD115-19-201ENST00000363098 82 ntBASIC-1.29□□□□□ -2.62
ABCA1O95477 SNORD115-18-201ENST00000363293 82 ntBASIC-1.29□□□□□ -2.62
ABCA1O95477 SNORD115-17-201ENST00000364612 82 ntBASIC-1.29□□□□□ -2.62
ABCA1O95477 RNU6-1306P-201ENST00000365219 99 ntBASIC-1.29□□□□□ -2.62
Retrieved 100 of 98,524 protein–RNA pairs in 105.8 ms