Protein–RNA interactions for Protein: O95476

CTDNEP1, CTD nuclear envelope phosphatase 1, humanhuman

Predictions only

Length 244 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1O95476 AC138907.4-201ENST00000570107 226 ntBASIC0.13□□□□□ -2.39
CTDNEP1O95476 MIR3646-201ENST00000578301 84 ntBASIC0.13□□□□□ -2.39
CTDNEP1O95476 AC021443.1-201ENST00000604478 211 ntBASIC0.13□□□□□ -2.39
CTDNEP1O95476 MIR6718-201ENST00000616153 80 ntBASIC0.13□□□□□ -2.39
CTDNEP1O95476 Y_RNA.119-201ENST00000363301 96 ntBASIC0.12□□□□□ -2.39
CTDNEP1O95476 Y_RNA.240-201ENST00000364469 95 ntBASIC0.12□□□□□ -2.39
CTDNEP1O95476 RNY1P2-201ENST00000364820 117 ntBASIC0.12□□□□□ -2.39
CTDNEP1O95476 AC073261.1-201ENST00000429409 121 ntBASIC0.12□□□□□ -2.39
CTDNEP1O95476 RNU6-861P-201ENST00000516745 106 ntBASIC0.12□□□□□ -2.39
CTDNEP1O95476 MIR4639-201ENST00000584938 69 ntBASIC0.12□□□□□ -2.39
CTDNEP1O95476 AC108081.1-201ENST00000604358 221 ntBASIC0.12□□□□□ -2.39
CTDNEP1O95476 AC072026.1-201ENST00000605023 201 ntBASIC0.12□□□□□ -2.39
CTDNEP1O95476 RNU1-29P-201ENST00000606574 126 ntBASIC0.12□□□□□ -2.39
CTDNEP1O95476 TUG1_4.1-201ENST00000619464 181 ntBASIC0.12□□□□□ -2.39
CTDNEP1O95476 AC108866.1-201ENST00000503073 2339 ntTSL 5 BASIC0.12□□□□□ -2.39
CTDNEP1O95476 MIR330-201ENST00000362196 94 ntBASIC0.11□□□□□ -2.39
CTDNEP1O95476 RNU4-58P-201ENST00000363192 141 ntBASIC0.11□□□□□ -2.39
CTDNEP1O95476 SNORD114-10-201ENST00000363409 72 ntBASIC0.11□□□□□ -2.39
CTDNEP1O95476 RNU4-67P-201ENST00000364569 141 ntBASIC0.11□□□□□ -2.39
CTDNEP1O95476 Y_RNA.489-201ENST00000384410 101 ntBASIC0.11□□□□□ -2.39
CTDNEP1O95476 RNU6-1104P-201ENST00000384723 104 ntBASIC0.11□□□□□ -2.39
CTDNEP1O95476 RNU6ATAC23P-201ENST00000408448 123 ntBASIC0.11□□□□□ -2.39
CTDNEP1O95476 MIR1295A-201ENST00000408463 79 ntBASIC0.11□□□□□ -2.39
CTDNEP1O95476 AC074198.2-201ENST00000508153 258 ntBASIC0.11□□□□□ -2.39
CTDNEP1O95476 RNA5SP227-201ENST00000516184 113 ntBASIC0.11□□□□□ -2.39
CTDNEP1O95476 RNU6-388P-201ENST00000517012 105 ntBASIC0.11□□□□□ -2.39
CTDNEP1O95476 RNU6-389P-201ENST00000517048 105 ntBASIC0.11□□□□□ -2.39
CTDNEP1O95476 RNU6-1271P-201ENST00000517049 105 ntBASIC0.11□□□□□ -2.39
CTDNEP1O95476 AP002392.1-201ENST00000537692 208 ntBASIC0.11□□□□□ -2.39
CTDNEP1O95476 AC112693.2-201ENST00000556538 232 ntBASIC0.11□□□□□ -2.39
CTDNEP1O95476 MIR4752-201ENST00000579672 72 ntBASIC0.11□□□□□ -2.39
CTDNEP1O95476 MIR8087-201ENST00000612745 78 ntBASIC0.11□□□□□ -2.39
CTDNEP1O95476 AC091304.10-201ENST00000641554 121 ntBASIC0.11□□□□□ -2.39
CTDNEP1O95476 Y_RNA.188-201ENST00000363952 111 ntBASIC0.1□□□□□ -2.39
CTDNEP1O95476 Y_RNA.298-201ENST00000364960 107 ntBASIC0.1□□□□□ -2.39
CTDNEP1O95476 RNU6-1126P-201ENST00000384002 107 ntBASIC0.1□□□□□ -2.39
CTDNEP1O95476 Y_RNA.441-201ENST00000384123 112 ntBASIC0.1□□□□□ -2.39
CTDNEP1O95476 RNU6-1321P-201ENST00000390905 107 ntBASIC0.1□□□□□ -2.39
CTDNEP1O95476 PCNPP3-201ENST00000393579 471 ntBASIC0.1□□□□□ -2.39
CTDNEP1O95476 MTATP6P21-201ENST00000440681 189 ntBASIC0.1□□□□□ -2.39
CTDNEP1O95476 RNU6-138P-201ENST00000515952 107 ntBASIC0.1□□□□□ -2.39
CTDNEP1O95476 RNU6-1232P-201ENST00000516299 86 ntBASIC0.1□□□□□ -2.39
CTDNEP1O95476 RNU6-135P-201ENST00000516769 101 ntBASIC0.1□□□□□ -2.39
CTDNEP1O95476 DNAJC19P2-201ENST00000593340 302 ntBASIC0.1□□□□□ -2.39
CTDNEP1O95476 AC023932.2-201ENST00000603176 175 ntBASIC0.1□□□□□ -2.39
CTDNEP1O95476 MIR6779-201ENST00000617283 64 ntBASIC0.1□□□□□ -2.39
CTDNEP1O95476 Y_RNA.56-201ENST00000362798 112 ntBASIC0.09□□□□□ -2.4
CTDNEP1O95476 RNU6-1229P-201ENST00000364295 107 ntBASIC0.09□□□□□ -2.4
CTDNEP1O95476 Y_RNA.423-201ENST00000384057 113 ntBASIC0.09□□□□□ -2.4
CTDNEP1O95476 MIRLET7F2-201ENST00000385277 83 ntBASIC0.09□□□□□ -2.4
CTDNEP1O95476 Y_RNA.584-201ENST00000391090 114 ntBASIC0.09□□□□□ -2.4
CTDNEP1O95476 RNU4-69P-201ENST00000410677 143 ntBASIC0.09□□□□□ -2.4
CTDNEP1O95476 AC244505.6-201ENST00000452829 130 ntBASIC0.09□□□□□ -2.4
CTDNEP1O95476 RNU7-120P-201ENST00000459334 63 ntBASIC0.09□□□□□ -2.4
CTDNEP1O95476 Y_RNA.690-201ENST00000516603 95 ntBASIC0.09□□□□□ -2.4
CTDNEP1O95476 AC098479.1-201ENST00000609225 154 ntBASIC0.09□□□□□ -2.4
CTDNEP1O95476 Y_RNA.49-201ENST00000362714 112 ntBASIC0.08□□□□□ -2.4
CTDNEP1O95476 SNORD115-24-201ENST00000363528 82 ntBASIC0.08□□□□□ -2.4
CTDNEP1O95476 RNU6-200P-201ENST00000364743 107 ntBASIC0.08□□□□□ -2.4
CTDNEP1O95476 RNU6-1318P-201ENST00000365389 103 ntBASIC0.08□□□□□ -2.4
CTDNEP1O95476 MIR206-201ENST00000384872 86 ntBASIC0.08□□□□□ -2.4
CTDNEP1O95476 MIR7-2-201ENST00000384970 110 ntBASIC0.08□□□□□ -2.4
CTDNEP1O95476 SNORD37.2-201ENST00000391075 66 ntBASIC0.08□□□□□ -2.4
CTDNEP1O95476 AL603914.1-201ENST00000401964 204 ntBASIC0.08□□□□□ -2.4
CTDNEP1O95476 RNU6-1135P-201ENST00000411083 103 ntBASIC0.08□□□□□ -2.4
CTDNEP1O95476 RNU7-197P-201ENST00000458836 62 ntBASIC0.08□□□□□ -2.4
CTDNEP1O95476 RNU7-161P-201ENST00000517289 62 ntBASIC0.08□□□□□ -2.4
CTDNEP1O95476 MIR4315-1-201ENST00000636800 73 ntBASIC0.08□□□□□ -2.4
CTDNEP1O95476 MIR4315-2-201ENST00000640925 73 ntBASIC0.08□□□□□ -2.4
CTDNEP1O95476 MIR101-2-201ENST00000362195 79 ntBASIC0.07□□□□□ -2.4
CTDNEP1O95476 RNU6-726P-201ENST00000364680 107 ntBASIC0.07□□□□□ -2.4
CTDNEP1O95476 Y_RNA.272-201ENST00000364696 102 ntBASIC0.07□□□□□ -2.4
CTDNEP1O95476 RNU6-716P-201ENST00000365621 103 ntBASIC0.07□□□□□ -2.4
CTDNEP1O95476 MT-TI-201ENST00000387365 69 ntBASIC0.07□□□□□ -2.4
CTDNEP1O95476 MT-TG-201ENST00000387429 68 ntBASIC0.07□□□□□ -2.4
CTDNEP1O95476 MIR1197-201ENST00000408818 88 ntBASIC0.07□□□□□ -2.4
CTDNEP1O95476 RNY4P20-201ENST00000516678 93 ntBASIC0.07□□□□□ -2.4
CTDNEP1O95476 SNORA81.3-201ENST00000517283 198 ntBASIC0.07□□□□□ -2.4
CTDNEP1O95476 IGKV1-22-201ENST00000524313 326 ntBASIC0.07□□□□□ -2.4
CTDNEP1O95476 Y_RNA.258-201ENST00000364613 105 ntBASIC0.06□□□□□ -2.4
CTDNEP1O95476 RNU4-11P-201ENST00000365287 132 ntBASIC0.06□□□□□ -2.4
CTDNEP1O95476 RNU6-1130P-201ENST00000365434 107 ntBASIC0.06□□□□□ -2.4
CTDNEP1O95476 Y_RNA.448-201ENST00000384185 108 ntBASIC0.06□□□□□ -2.4
CTDNEP1O95476 RNU6-429P-201ENST00000384582 108 ntBASIC0.06□□□□□ -2.4
CTDNEP1O95476 RNU6-460P-201ENST00000391158 108 ntBASIC0.06□□□□□ -2.4
CTDNEP1O95476 TRAJ51-201ENST00000504127 63 ntBASIC0.06□□□□□ -2.4
CTDNEP1O95476 RNA5SP330-201ENST00000517096 96 ntBASIC0.06□□□□□ -2.4
CTDNEP1O95476 IGHVII-40-1-201ENST00000517316 58 ntBASIC0.06□□□□□ -2.4
CTDNEP1O95476 AL137067.1-201ENST00000615933 120 ntBASIC0.06□□□□□ -2.4
CTDNEP1O95476 SNORA42.1-201ENST00000363515 137 ntBASIC0.05□□□□□ -2.4
CTDNEP1O95476 RNA5SP403-201ENST00000363598 108 ntBASIC0.05□□□□□ -2.4
CTDNEP1O95476 SNORD114-9-201ENST00000364370 72 ntBASIC0.05□□□□□ -2.4
CTDNEP1O95476 SNORA2A-201ENST00000383885 135 ntBASIC0.05□□□□□ -2.4
CTDNEP1O95476 Y_RNA.476-201ENST00000384347 108 ntBASIC0.05□□□□□ -2.4
CTDNEP1O95476 RNU6-616P-201ENST00000384353 107 ntBASIC0.05□□□□□ -2.4
CTDNEP1O95476 RNU6-127P-201ENST00000390897 107 ntBASIC0.05□□□□□ -2.4
CTDNEP1O95476 RNU7-48P-201ENST00000458875 63 ntBASIC0.05□□□□□ -2.4
CTDNEP1O95476 Y_RNA.662-201ENST00000516028 97 ntBASIC0.05□□□□□ -2.4
CTDNEP1O95476 RNA5SP214-201ENST00000363378 118 ntBASIC0.04□□□□□ -2.4
CTDNEP1O95476 Y_RNA.299-201ENST00000364973 94 ntBASIC0.04□□□□□ -2.4
Retrieved 100 of 98,524 protein–RNA pairs in 107.5 ms