Protein–RNA interactions for Protein: O95343

SIX3, Homeobox protein SIX3, humanhuman

Predicted RBP Predictions only

Length 332 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIX3O95343 SCARNA16.5-201ENST00000517114 183 ntBASIC0.12□□□□□ -2.39
SIX3O95343 AC069113.3-201ENST00000521019 150 ntBASIC0.12□□□□□ -2.39
SIX3O95343 MIR4308-201ENST00000580634 81 ntBASIC0.12□□□□□ -2.39
SIX3O95343 RNA5SP133-201ENST00000363368 119 ntBASIC0.11□□□□□ -2.39
SIX3O95343 Y_RNA.350-201ENST00000365409 98 ntBASIC0.11□□□□□ -2.39
SIX3O95343 RNU6-1336P-201ENST00000383886 109 ntBASIC0.11□□□□□ -2.39
SIX3O95343 MIRLET7F2-201ENST00000385277 83 ntBASIC0.11□□□□□ -2.39
SIX3O95343 RNA5SP144-201ENST00000410846 116 ntBASIC0.11□□□□□ -2.39
SIX3O95343 Y_RNA.659-201ENST00000515994 113 ntBASIC0.11□□□□□ -2.39
SIX3O95343 RNU4-71P-201ENST00000516258 113 ntBASIC0.11□□□□□ -2.39
SIX3O95343 RNU6-327P-201ENST00000516270 127 ntBASIC0.11□□□□□ -2.39
SIX3O95343 RNU6-531P-201ENST00000516694 104 ntBASIC0.11□□□□□ -2.39
SIX3O95343 DEFB131B-201ENST00000530210 213 ntAPPRIS P1 TSL 1 (best) BASIC0.11□□□□□ -2.39
SIX3O95343 U6.109-201ENST00000636749 87 ntBASIC0.11□□□□□ -2.39
SIX3O95343 RNU4-32P-201ENST00000363404 141 ntBASIC0.1□□□□□ -2.39
SIX3O95343 SNORA20.1-201ENST00000364790 130 ntBASIC0.1□□□□□ -2.39
SIX3O95343 RNU6V-201ENST00000384105 107 ntBASIC0.1□□□□□ -2.39
SIX3O95343 Y_RNA.562-201ENST00000384695 113 ntBASIC0.1□□□□□ -2.39
SIX3O95343 Y_RNA.583-201ENST00000391033 113 ntBASIC0.1□□□□□ -2.39
SIX3O95343 AC069271.1-201ENST00000445577 156 ntBASIC0.1□□□□□ -2.39
SIX3O95343 MIR4639-201ENST00000584938 69 ntBASIC0.1□□□□□ -2.39
SIX3O95343 MIR7107-201ENST00000611489 80 ntBASIC0.1□□□□□ -2.39
SIX3O95343 AC078938.1-201ENST00000620993 318 ntBASIC0.1□□□□□ -2.39
SIX3O95343 U6.106-201ENST00000636360 105 ntBASIC0.1□□□□□ -2.39
SIX3O95343 SNORD114-28-201ENST00000363610 72 ntBASIC0.09□□□□□ -2.4
SIX3O95343 RNU6-302P-201ENST00000365249 107 ntBASIC0.09□□□□□ -2.4
SIX3O95343 MIR214-201ENST00000385214 110 ntBASIC0.09□□□□□ -2.4
SIX3O95343 MIR548L-201ENST00000408303 86 ntBASIC0.09□□□□□ -2.4
SIX3O95343 MIR1295A-201ENST00000408463 79 ntBASIC0.09□□□□□ -2.4
SIX3O95343 MTCYBP9-201ENST00000431021 303 ntBASIC0.09□□□□□ -2.4
SIX3O95343 MTATP6P21-201ENST00000440681 189 ntBASIC0.09□□□□□ -2.4
SIX3O95343 AL118496.2-201ENST00000448300 230 ntBASIC0.09□□□□□ -2.4
SIX3O95343 RNU6-1258P-201ENST00000516911 111 ntBASIC0.09□□□□□ -2.4
SIX3O95343 AC141557.1-201ENST00000540982 400 ntBASIC0.09□□□□□ -2.4
SIX3O95343 MIR4431-201ENST00000579990 94 ntBASIC0.09□□□□□ -2.4
SIX3O95343 Y_RNA.20-201ENST00000362479 113 ntBASIC0.08□□□□□ -2.4
SIX3O95343 Y_RNA.52-201ENST00000362760 96 ntBASIC0.08□□□□□ -2.4
SIX3O95343 Y_RNA.468-201ENST00000384298 102 ntBASIC0.08□□□□□ -2.4
SIX3O95343 SNORD28-201ENST00000384706 75 ntBASIC0.08□□□□□ -2.4
SIX3O95343 RNU6-1064P-201ENST00000410626 104 ntBASIC0.08□□□□□ -2.4
SIX3O95343 AC107027.2-201ENST00000512197 115 ntBASIC0.08□□□□□ -2.4
SIX3O95343 MRPS18CP4-201ENST00000535821 231 ntBASIC0.08□□□□□ -2.4
SIX3O95343 MIR3128-201ENST00000581957 66 ntBASIC0.08□□□□□ -2.4
SIX3O95343 AC244669.1-204ENST00000621564 178 ntBASIC0.08□□□□□ -2.4
SIX3O95343 Y_RNA.75-201ENST00000362927 97 ntBASIC0.07□□□□□ -2.4
SIX3O95343 RNU6-818P-201ENST00000364837 108 ntBASIC0.07□□□□□ -2.4
SIX3O95343 Y_RNA.470-201ENST00000384307 117 ntBASIC0.07□□□□□ -2.4
SIX3O95343 RNU7-35P-201ENST00000517174 62 ntBASIC0.07□□□□□ -2.4
SIX3O95343 RNA5SP47-201ENST00000517230 109 ntBASIC0.07□□□□□ -2.4
SIX3O95343 AC062037.2-201ENST00000610137 73 ntBASIC0.07□□□□□ -2.4
SIX3O95343 HOTAIRM1_4.1-201ENST00000617934 102 ntBASIC0.07□□□□□ -2.4
SIX3O95343 Y_RNA.49-201ENST00000362714 112 ntBASIC0.06□□□□□ -2.4
SIX3O95343 AC096949.1-201ENST00000412047 152 ntBASIC0.06□□□□□ -2.4
SIX3O95343 CLRN1-AS1.1-201ENST00000615643 79 ntBASIC0.06□□□□□ -2.4
SIX3O95343 SNORD114-16-201ENST00000363044 70 ntBASIC0.05□□□□□ -2.4
SIX3O95343 RNU6-1020P-201ENST00000363684 107 ntBASIC0.05□□□□□ -2.4
SIX3O95343 Y_RNA.337-201ENST00000365312 102 ntBASIC0.05□□□□□ -2.4
SIX3O95343 SNORD18B-201ENST00000365659 72 ntBASIC0.05□□□□□ -2.4
SIX3O95343 MIR411-201ENST00000362239 96 ntBASIC0.04□□□□□ -2.4
SIX3O95343 RNA5SP214-201ENST00000363378 118 ntBASIC0.04□□□□□ -2.4
SIX3O95343 RNU6-694P-201ENST00000364071 147 ntBASIC0.04□□□□□ -2.4
SIX3O95343 RNU6-768P-201ENST00000384683 107 ntBASIC0.04□□□□□ -2.4
SIX3O95343 MIR635-201ENST00000384830 98 ntBASIC0.04□□□□□ -2.4
SIX3O95343 MIR760-201ENST00000390220 80 ntBASIC0.04□□□□□ -2.4
SIX3O95343 Y_RNA.660-201ENST00000516002 120 ntBASIC0.04□□□□□ -2.4
SIX3O95343 AC138907.4-201ENST00000570107 226 ntBASIC0.04□□□□□ -2.4
SIX3O95343 MIR4667-201ENST00000578933 66 ntBASIC0.04□□□□□ -2.4
SIX3O95343 TUG1_4.1-201ENST00000619464 181 ntBASIC0.04□□□□□ -2.4
SIX3O95343 MIR6828-201ENST00000636181 60 ntBASIC0.04□□□□□ -2.4
SIX3O95343 MIR6844-201ENST00000637122 62 ntBASIC0.04□□□□□ -2.4
SIX3O95343 Y_RNA.83-201ENST00000363005 113 ntBASIC0.03□□□□□ -2.4
SIX3O95343 Y_RNA.120-201ENST00000363304 110 ntBASIC0.03□□□□□ -2.4
SIX3O95343 MIR610-201ENST00000385139 96 ntBASIC0.03□□□□□ -2.4
SIX3O95343 MIR643-201ENST00000385267 97 ntBASIC0.03□□□□□ -2.4
SIX3O95343 PCNPP3-201ENST00000393579 471 ntBASIC0.03□□□□□ -2.4
SIX3O95343 SNORD67.1-201ENST00000516618 108 ntBASIC0.03□□□□□ -2.4
SIX3O95343 MIR548AE2-201ENST00000583456 67 ntBASIC0.03□□□□□ -2.4
SIX3O95343 AC021443.1-201ENST00000604478 211 ntBASIC0.03□□□□□ -2.4
SIX3O95343 AC098479.1-201ENST00000609225 154 ntBASIC0.03□□□□□ -2.4
SIX3O95343 AC011603.4-201ENST00000611325 277 ntBASIC0.03□□□□□ -2.4
SIX3O95343 AC105081.1-201ENST00000617727 106 ntBASIC0.03□□□□□ -2.4
SIX3O95343 U4.1-201ENST00000620349 87 ntBASIC0.03□□□□□ -2.4
SIX3O95343 Y_RNA.119-201ENST00000363301 96 ntBASIC0.02□□□□□ -2.41
SIX3O95343 SNORA63.5-201ENST00000363548 123 ntBASIC0.02□□□□□ -2.41
SIX3O95343 Y_RNA.162-201ENST00000363683 102 ntBASIC0.02□□□□□ -2.41
SIX3O95343 Y_RNA.200-201ENST00000364018 102 ntBASIC0.02□□□□□ -2.41
SIX3O95343 Y_RNA.357-201ENST00000365487 109 ntBASIC0.02□□□□□ -2.41
SIX3O95343 RNU6-187P-201ENST00000384139 106 ntBASIC0.02□□□□□ -2.41
SIX3O95343 Y_RNA.531-201ENST00000384589 121 ntBASIC0.02□□□□□ -2.41
SIX3O95343 SNORD37.2-201ENST00000391075 66 ntBASIC0.02□□□□□ -2.41
SIX3O95343 RNU4-63P-201ENST00000411313 118 ntBASIC0.02□□□□□ -2.41
SIX3O95343 RNU6-138P-201ENST00000515952 107 ntBASIC0.02□□□□□ -2.41
SIX3O95343 RNU6-240P-201ENST00000516098 97 ntBASIC0.02□□□□□ -2.41
SIX3O95343 Y_RNA.668-201ENST00000516233 93 ntBASIC0.02□□□□□ -2.41
SIX3O95343 RNU6-1045P-201ENST00000516321 107 ntBASIC0.02□□□□□ -2.41
SIX3O95343 SNORD115-24-201ENST00000363528 82 ntBASIC0.01□□□□□ -2.41
SIX3O95343 SNORA75.5-201ENST00000391291 81 ntBASIC0.01□□□□□ -2.41
SIX3O95343 RNU6-1023P-201ENST00000516137 106 ntBASIC0.01□□□□□ -2.41
SIX3O95343 RNU7-137P-201ENST00000516788 62 ntBASIC0.01□□□□□ -2.41
SIX3O95343 RNU6-111P-201ENST00000517179 105 ntBASIC0.01□□□□□ -2.41
Retrieved 100 of 98,524 protein–RNA pairs in 209.4 ms