Protein–RNA interactions for Protein: O95219

SNX4, Sorting nexin-4, humanhuman

Predictions only

Length 450 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX4O95219 RNU4-36P-201ENST00000364294 144 ntBASIC-1.14□□□□□ -2.59
SNX4O95219 Y_RNA.275-201ENST00000364726 110 ntBASIC-1.14□□□□□ -2.59
SNX4O95219 RNU6-1336P-201ENST00000383886 109 ntBASIC-1.14□□□□□ -2.59
SNX4O95219 RNU6-101P-201ENST00000410323 104 ntBASIC-1.14□□□□□ -2.59
SNX4O95219 SERF1AP1-201ENST00000514575 187 ntBASIC-1.14□□□□□ -2.59
SNX4O95219 AL359881.1-201ENST00000602916 267 ntBASIC-1.14□□□□□ -2.59
SNX4O95219 RNU6-86P-201ENST00000606534 107 ntBASIC-1.14□□□□□ -2.59
SNX4O95219 Y_RNA.120-201ENST00000363304 110 ntBASIC-1.15□□□□□ -2.59
SNX4O95219 Y_RNA.315-201ENST00000365117 102 ntBASIC-1.15□□□□□ -2.59
SNX4O95219 MIR539-201ENST00000365690 78 ntBASIC-1.15□□□□□ -2.59
SNX4O95219 RNU6-1201P-201ENST00000384227 107 ntBASIC-1.15□□□□□ -2.59
SNX4O95219 RNU6-30P-201ENST00000384561 107 ntBASIC-1.15□□□□□ -2.59
SNX4O95219 MIR624-201ENST00000385217 97 ntBASIC-1.15□□□□□ -2.59
SNX4O95219 RNU6-823P-201ENST00000391042 103 ntBASIC-1.15□□□□□ -2.59
SNX4O95219 MIR548I2-201ENST00000408348 149 ntBASIC-1.15□□□□□ -2.59
SNX4O95219 SNORD38.3-201ENST00000516599 73 ntBASIC-1.15□□□□□ -2.59
SNX4O95219 DEFB131B-201ENST00000530210 213 ntAPPRIS P1 TSL 1 (best) BASIC-1.15□□□□□ -2.59
SNX4O95219 AC006504.6-201ENST00000590142 199 ntBASIC-1.15□□□□□ -2.59
SNX4O95219 SNORD114-25-201ENST00000363742 72 ntBASIC-1.16□□□□□ -2.6
SNX4O95219 Y_RNA.484-201ENST00000384389 103 ntBASIC-1.16□□□□□ -2.6
SNX4O95219 RNU6-721P-201ENST00000410155 105 ntBASIC-1.16□□□□□ -2.6
SNX4O95219 AL500527.2-201ENST00000454105 95 ntBASIC-1.16□□□□□ -2.6
SNX4O95219 AC090971.5-201ENST00000621102 293 ntBASIC-1.16□□□□□ -2.6
SNX4O95219 RNU6-770P-201ENST00000363929 105 ntBASIC-1.17□□□□□ -2.6
SNX4O95219 MIR519A1-201ENST00000385257 85 ntBASIC-1.17□□□□□ -2.6
SNX4O95219 MTATP6P23-201ENST00000440153 476 ntBASIC-1.17□□□□□ -2.6
SNX4O95219 snoU13.11-201ENST00000459219 104 ntBASIC-1.17□□□□□ -2.6
SNX4O95219 RNU6-1143P-201ENST00000516125 104 ntBASIC-1.17□□□□□ -2.6
SNX4O95219 MIR4500-201ENST00000579472 76 ntBASIC-1.17□□□□□ -2.6
SNX4O95219 Y_RNA.246-201ENST00000364495 108 ntBASIC-1.18□□□□□ -2.6
SNX4O95219 SNORD114-29-201ENST00000364819 70 ntBASIC-1.18□□□□□ -2.6
SNX4O95219 SPINT5P-201ENST00000448174 155 ntBASIC-1.18□□□□□ -2.6
SNX4O95219 MIR548AE1-201ENST00000583292 70 ntBASIC-1.18□□□□□ -2.6
SNX4O95219 MIR6851-201ENST00000617060 67 ntBASIC-1.18□□□□□ -2.6
SNX4O95219 AC093423.1-201ENST00000440817 142 ntBASIC-1.19□□□□□ -2.6
SNX4O95219 SCARNA17-201ENST00000516183 144 ntBASIC-1.19□□□□□ -2.6
SNX4O95219 RNU6-561P-201ENST00000516222 102 ntBASIC-1.19□□□□□ -2.6
SNX4O95219 MTND5P40-201ENST00000559945 246 ntBASIC-1.19□□□□□ -2.6
SNX4O95219 AC069503.3-201ENST00000618674 145 ntBASIC-1.19□□□□□ -2.6
SNX4O95219 Y_RNA.555-201ENST00000384673 110 ntBASIC-1.2□□□□□ -2.6
SNX4O95219 Y_RNA.645-201ENST00000391229 102 ntBASIC-1.2□□□□□ -2.6
SNX4O95219 RNY3P15-201ENST00000516297 97 ntBASIC-1.2□□□□□ -2.6
SNX4O95219 MIR548AE2-201ENST00000583456 67 ntBASIC-1.2□□□□□ -2.6
SNX4O95219 Y_RNA.19-201ENST00000362462 99 ntBASIC-1.21□□□□□ -2.6
SNX4O95219 RNU6-103P-201ENST00000363686 107 ntBASIC-1.21□□□□□ -2.6
SNX4O95219 RNU6-450P-201ENST00000364654 107 ntBASIC-1.21□□□□□ -2.6
SNX4O95219 Y_RNA.276-201ENST00000364732 109 ntBASIC-1.21□□□□□ -2.6
SNX4O95219 SNORD115-44-201ENST00000365391 82 ntBASIC-1.21□□□□□ -2.6
SNX4O95219 Y_RNA.389-201ENST00000383924 113 ntBASIC-1.21□□□□□ -2.6
SNX4O95219 RNU6-381P-201ENST00000391259 108 ntBASIC-1.21□□□□□ -2.6
SNX4O95219 Y_RNA.809-201ENST00000516058 95 ntBASIC-1.21□□□□□ -2.6
SNX4O95219 RNU6-1236P-201ENST00000517080 99 ntBASIC-1.21□□□□□ -2.6
SNX4O95219 YWHAEP2-201ENST00000580066 112 ntBASIC-1.21□□□□□ -2.6
SNX4O95219 Y_RNA.16-201ENST00000362421 102 ntBASIC-1.22□□□□□ -2.6
SNX4O95219 RNU6-978P-201ENST00000364371 103 ntBASIC-1.22□□□□□ -2.6
SNX4O95219 Y_RNA.531-201ENST00000384589 121 ntBASIC-1.22□□□□□ -2.6
SNX4O95219 Y_RNA.579-201ENST00000390939 94 ntBASIC-1.22□□□□□ -2.6
SNX4O95219 SNORD2.1-201ENST00000458762 69 ntBASIC-1.22□□□□□ -2.6
SNX4O95219 SNORA13-201ENST00000458790 133 ntBASIC-1.22□□□□□ -2.6
SNX4O95219 AC008883.1-201ENST00000506562 193 ntTSL 3 BASIC-1.22□□□□□ -2.6
SNX4O95219 AC093783.1-201ENST00000612976 329 ntBASIC-1.22□□□□□ -2.6
SNX4O95219 MTND5P18-201ENST00000445624 1801 ntBASIC-1.23□□□□□ -2.61
SNX4O95219 Y_RNA.31-201ENST00000362574 102 ntBASIC-1.23□□□□□ -2.61
SNX4O95219 Y_RNA.117-201ENST00000363294 101 ntBASIC-1.23□□□□□ -2.61
SNX4O95219 RNU6-900P-201ENST00000384498 102 ntBASIC-1.23□□□□□ -2.61
SNX4O95219 RNU7-195P-201ENST00000458793 62 ntBASIC-1.23□□□□□ -2.61
SNX4O95219 MIR548AG2-201ENST00000581228 64 ntBASIC-1.23□□□□□ -2.61
SNX4O95219 MIR4499-201ENST00000584834 69 ntBASIC-1.23□□□□□ -2.61
SNX4O95219 Y_RNA.44-201ENST00000362676 108 ntBASIC-1.24□□□□□ -2.61
SNX4O95219 Y_RNA.98-201ENST00000363109 102 ntBASIC-1.24□□□□□ -2.61
SNX4O95219 Y_RNA.395-201ENST00000383945 109 ntBASIC-1.24□□□□□ -2.61
SNX4O95219 RNU6-1036P-201ENST00000383959 104 ntBASIC-1.24□□□□□ -2.61
SNX4O95219 RNU6-901P-201ENST00000384593 106 ntBASIC-1.24□□□□□ -2.61
SNX4O95219 AC113618.1-201ENST00000416747 285 ntBASIC-1.24□□□□□ -2.61
SNX4O95219 ELOCP20-201ENST00000422460 345 ntBASIC-1.24□□□□□ -2.61
SNX4O95219 RNU7-48P-201ENST00000458875 63 ntBASIC-1.24□□□□□ -2.61
SNX4O95219 RNA5SP67-201ENST00000516422 131 ntBASIC-1.24□□□□□ -2.61
SNX4O95219 MRPS18CP4-201ENST00000535821 231 ntBASIC-1.24□□□□□ -2.61
SNX4O95219 uc_338.19-201ENST00000616808 99 ntBASIC-1.24□□□□□ -2.61
SNX4O95219 Y_RNA.214-201ENST00000364201 112 ntBASIC-1.25□□□□□ -2.61
SNX4O95219 RNU6-1321P-201ENST00000390905 107 ntBASIC-1.25□□□□□ -2.61
SNX4O95219 AL121914.1-201ENST00000450188 156 ntBASIC-1.25□□□□□ -2.61
SNX4O95219 RNU6-1338P-201ENST00000516328 91 ntBASIC-1.25□□□□□ -2.61
SNX4O95219 SCARNA24.2-201ENST00000516968 130 ntBASIC-1.25□□□□□ -2.61
SNX4O95219 RNU6-502P-201ENST00000362419 108 ntBASIC-1.26□□□□□ -2.61
SNX4O95219 RNU6-1260P-201ENST00000362944 107 ntBASIC-1.26□□□□□ -2.61
SNX4O95219 Y_RNA.82-201ENST00000363000 102 ntBASIC-1.26□□□□□ -2.61
SNX4O95219 Y_RNA.92-201ENST00000363043 102 ntBASIC-1.26□□□□□ -2.61
SNX4O95219 Y_RNA.235-201ENST00000364412 102 ntBASIC-1.26□□□□□ -2.61
SNX4O95219 Y_RNA.306-201ENST00000365015 102 ntBASIC-1.26□□□□□ -2.61
SNX4O95219 Y_RNA.312-201ENST00000365089 102 ntBASIC-1.26□□□□□ -2.61
SNX4O95219 Y_RNA.322-201ENST00000365151 102 ntBASIC-1.26□□□□□ -2.61
SNX4O95219 RNU4-17P-201ENST00000365598 141 ntBASIC-1.26□□□□□ -2.61
SNX4O95219 RNU6-524P-201ENST00000384270 107 ntBASIC-1.26□□□□□ -2.61
SNX4O95219 Y_RNA.562-201ENST00000384695 113 ntBASIC-1.26□□□□□ -2.61
SNX4O95219 MIR519E-201ENST00000385075 84 ntBASIC-1.26□□□□□ -2.61
SNX4O95219 SNORD63B-201ENST00000411005 70 ntBASIC-1.26□□□□□ -2.61
SNX4O95219 Y_RNA.650-201ENST00000459002 102 ntBASIC-1.26□□□□□ -2.61
SNX4O95219 Y_RNA.777-201ENST00000516982 102 ntBASIC-1.26□□□□□ -2.61
SNX4O95219 MIR3179-1-201ENST00000578940 84 ntBASIC-1.26□□□□□ -2.61
Retrieved 100 of 98,524 protein–RNA pairs in 178.5 ms