Protein–RNA interactions for Protein: O76039

CDKL5, Cyclin-dependent kinase-like 5, humanhuman

Predictions only

Length 1,030 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL5O76039 MRPL35P3-201ENST00000421557 364 ntBASIC1.41□□□□□ -2.18
CDKL5O76039 SNORA4-201ENST00000584302 138 ntBASIC1.41□□□□□ -2.18
CDKL5O76039 AC006254.2-201ENST00000603259 279 ntBASIC1.41□□□□□ -2.18
CDKL5O76039 AL359821.1-201ENST00000605519 182 ntBASIC1.41□□□□□ -2.18
CDKL5O76039 MALAT1.1-201ENST00000618249 95 ntBASIC1.41□□□□□ -2.18
CDKL5O76039 AL353770.2-201ENST00000620024 78 ntBASIC1.41□□□□□ -2.18
CDKL5O76039 ABCA5-201ENST00000392676 8220 ntAPPRIS P1 TSL 1 (best) BASIC1.41□□□□□ -2.18
CDKL5O76039 Y_RNA.95-201ENST00000363079 95 ntBASIC1.4□□□□□ -2.19
CDKL5O76039 Y_RNA.363-201ENST00000365529 113 ntBASIC1.4□□□□□ -2.19
CDKL5O76039 RNU6-447P-201ENST00000410293 104 ntBASIC1.4□□□□□ -2.19
CDKL5O76039 RNU6-1118P-201ENST00000410382 104 ntBASIC1.4□□□□□ -2.19
CDKL5O76039 RNU6-1076P-201ENST00000410397 104 ntBASIC1.4□□□□□ -2.19
CDKL5O76039 RNU6-355P-201ENST00000410427 104 ntBASIC1.4□□□□□ -2.19
CDKL5O76039 RNU6-791P-201ENST00000410467 104 ntBASIC1.4□□□□□ -2.19
CDKL5O76039 RNU6-705P-201ENST00000410601 104 ntBASIC1.4□□□□□ -2.19
CDKL5O76039 RNU6-1100P-201ENST00000410691 104 ntBASIC1.4□□□□□ -2.19
CDKL5O76039 RNU6-860P-201ENST00000410860 104 ntBASIC1.4□□□□□ -2.19
CDKL5O76039 RNU6-321P-201ENST00000410912 106 ntBASIC1.4□□□□□ -2.19
CDKL5O76039 RNU6-1217P-201ENST00000411276 104 ntBASIC1.4□□□□□ -2.19
CDKL5O76039 RNU6-785P-201ENST00000411324 104 ntBASIC1.4□□□□□ -2.19
CDKL5O76039 AC096949.1-201ENST00000412047 152 ntBASIC1.4□□□□□ -2.19
CDKL5O76039 RPS29P28-201ENST00000446439 141 ntBASIC1.4□□□□□ -2.19
CDKL5O76039 SNORA31.2-201ENST00000516019 134 ntBASIC1.4□□□□□ -2.19
CDKL5O76039 AC096720.1-201ENST00000604441 183 ntBASIC1.4□□□□□ -2.19
CDKL5O76039 U6.90-201ENST00000614007 104 ntBASIC1.4□□□□□ -2.19
CDKL5O76039 U6.70-201ENST00000620287 104 ntBASIC1.4□□□□□ -2.19
CDKL5O76039 MIR2052-201ENST00000636055 55 ntBASIC1.4□□□□□ -2.19
CDKL5O76039 Y_RNA.168-201ENST00000363740 102 ntBASIC1.39□□□□□ -2.19
CDKL5O76039 SNORD38.1-201ENST00000363863 68 ntBASIC1.39□□□□□ -2.19
CDKL5O76039 RNU6-580P-201ENST00000365159 107 ntBASIC1.39□□□□□ -2.19
CDKL5O76039 Y_RNA.467-201ENST00000384297 102 ntBASIC1.39□□□□□ -2.19
CDKL5O76039 U8.15-201ENST00000390947 134 ntBASIC1.39□□□□□ -2.19
CDKL5O76039 SNORA75.2-201ENST00000391138 150 ntBASIC1.39□□□□□ -2.19
CDKL5O76039 SNORA75.3-201ENST00000391231 150 ntBASIC1.39□□□□□ -2.19
CDKL5O76039 TRMT112P2-201ENST00000512910 132 ntBASIC1.39□□□□□ -2.19
CDKL5O76039 RNU6-902P-201ENST00000517212 91 ntBASIC1.39□□□□□ -2.19
CDKL5O76039 AC133485.1-201ENST00000567176 124 ntBASIC1.39□□□□□ -2.19
CDKL5O76039 MIR4781-201ENST00000585250 76 ntBASIC1.39□□□□□ -2.19
CDKL5O76039 AL157834.3-201ENST00000615543 103 ntBASIC1.39□□□□□ -2.19
CDKL5O76039 SEPT14P17-201ENST00000617978 177 ntBASIC1.39□□□□□ -2.19
CDKL5O76039 PPP1R3A-201ENST00000284601 4384 ntAPPRIS P1 TSL 1 (best) BASIC1.39□□□□□ -2.19
CDKL5O76039 Y_RNA.98-201ENST00000363109 102 ntBASIC1.38□□□□□ -2.19
CDKL5O76039 AC109327.2-201ENST00000448339 378 ntBASIC1.38□□□□□ -2.19
CDKL5O76039 snoU13.21-201ENST00000459368 105 ntBASIC1.38□□□□□ -2.19
CDKL5O76039 AC138749.4-201ENST00000563970 127 ntBASIC1.38□□□□□ -2.19
CDKL5O76039 AP001362.1-201ENST00000625165 124 ntBASIC1.38□□□□□ -2.19
CDKL5O76039 MIR337-201ENST00000362281 93 ntBASIC1.37□□□□□ -2.19
CDKL5O76039 Y_RNA.290-201ENST00000364879 114 ntBASIC1.37□□□□□ -2.19
CDKL5O76039 Y_RNA.330-201ENST00000365230 109 ntBASIC1.37□□□□□ -2.19
CDKL5O76039 SNORA2B-201ENST00000384583 137 ntBASIC1.37□□□□□ -2.19
CDKL5O76039 MT-TF-201ENST00000387314 71 ntBASIC1.37□□□□□ -2.19
CDKL5O76039 TRAJ1-201ENST00000390536 62 ntAPPRIS P1 BASIC1.37□□□□□ -2.19
CDKL5O76039 RNU6-162P-201ENST00000516228 103 ntBASIC1.37□□□□□ -2.19
CDKL5O76039 U7.3-201ENST00000616123 62 ntBASIC1.37□□□□□ -2.19
CDKL5O76039 GNPDA2-204ENST00000509756 5382 ntAPPRIS ALT1 TSL 1 (best) BASIC1.37□□□□□ -2.19
CDKL5O76039 Y_RNA.220-201ENST00000364244 109 ntBASIC1.36□□□□□ -2.19
CDKL5O76039 RNU6-1163P-201ENST00000364516 107 ntBASIC1.36□□□□□ -2.19
CDKL5O76039 RNU6-294P-201ENST00000364999 102 ntBASIC1.36□□□□□ -2.19
CDKL5O76039 AL591704.2-201ENST00000421658 181 ntBASIC1.36□□□□□ -2.19
CDKL5O76039 NMTRQ-TTG12-1-201ENST00000467595 72 ntBASIC1.36□□□□□ -2.19
CDKL5O76039 AC078980.1-201ENST00000485384 262 ntTSL 2 BASIC1.36□□□□□ -2.19
CDKL5O76039 U6.109-201ENST00000636749 87 ntBASIC1.36□□□□□ -2.19
CDKL5O76039 UBE3A-225ENST00000636667 5726 ntTSL 5 BASIC1.36□□□□□ -2.19
CDKL5O76039 ZNF260-205ENST00000593142 4047 ntAPPRIS P1 TSL 1 (best) BASIC1.35□□□□□ -2.19
CDKL5O76039 RNY1P2-201ENST00000364820 117 ntBASIC1.35□□□□□ -2.19
CDKL5O76039 MIR548G-201ENST00000408442 89 ntBASIC1.35□□□□□ -2.19
CDKL5O76039 RNY1P10-201ENST00000363268 113 ntBASIC1.34□□□□□ -2.19
CDKL5O76039 RNA5SP133-201ENST00000363368 119 ntBASIC1.34□□□□□ -2.19
CDKL5O76039 Y_RNA.327-201ENST00000365201 102 ntBASIC1.34□□□□□ -2.19
CDKL5O76039 RNU6-844P-201ENST00000517175 102 ntBASIC1.34□□□□□ -2.19
CDKL5O76039 AC036111.3-201ENST00000526389 112 ntBASIC1.34□□□□□ -2.19
CDKL5O76039 AC090897.1-201ENST00000580909 226 ntBASIC1.34□□□□□ -2.19
CDKL5O76039 MIR4439-201ENST00000583746 80 ntBASIC1.34□□□□□ -2.19
CDKL5O76039 RNU6-86P-201ENST00000606534 107 ntBASIC1.34□□□□□ -2.19
CDKL5O76039 RNU6-910P-201ENST00000390844 107 ntBASIC1.33□□□□□ -2.2
CDKL5O76039 AC015818.7-201ENST00000428754 109 ntBASIC1.33□□□□□ -2.2
CDKL5O76039 AC087499.7-201ENST00000441958 109 ntBASIC1.33□□□□□ -2.2
CDKL5O76039 SPINT5P-201ENST00000448174 155 ntBASIC1.33□□□□□ -2.2
CDKL5O76039 MIR18B-201ENST00000454574 71 ntBASIC1.33□□□□□ -2.2
CDKL5O76039 Y_RNA.705-201ENST00000516862 110 ntBASIC1.33□□□□□ -2.2
CDKL5O76039 RNU6-90P-201ENST00000606352 106 ntBASIC1.33□□□□□ -2.2
CDKL5O76039 MIR6078-201ENST00000611069 100 ntBASIC1.33□□□□□ -2.2
CDKL5O76039 AC012676.2-201ENST00000619258 186 ntBASIC1.33□□□□□ -2.2
CDKL5O76039 HSBP1P2-201ENST00000299671 229 ntBASIC1.32□□□□□ -2.2
CDKL5O76039 RNU6-1244P-201ENST00000363614 108 ntBASIC1.32□□□□□ -2.2
CDKL5O76039 SNORD113.3-201ENST00000364630 78 ntBASIC1.32□□□□□ -2.2
CDKL5O76039 SNORD38.2-201ENST00000384470 69 ntBASIC1.32□□□□□ -2.2
CDKL5O76039 RNU6-813P-201ENST00000384691 107 ntBASIC1.32□□□□□ -2.2
CDKL5O76039 RNU6-887P-201ENST00000410660 100 ntBASIC1.32□□□□□ -2.2
CDKL5O76039 SNORD83.1-201ENST00000411362 77 ntBASIC1.32□□□□□ -2.2
CDKL5O76039 MTND5P40-201ENST00000559945 246 ntBASIC1.32□□□□□ -2.2
CDKL5O76039 AC023827.1-201ENST00000569247 97 ntBASIC1.32□□□□□ -2.2
CDKL5O76039 ST7-OT3_3.1-201ENST00000611709 115 ntBASIC1.32□□□□□ -2.2
CDKL5O76039 ST7-AS2_1.1-201ENST00000622900 72 ntBASIC1.32□□□□□ -2.2
CDKL5O76039 Y_RNA.119-201ENST00000363301 96 ntBASIC1.31□□□□□ -2.2
CDKL5O76039 Y_RNA.173-201ENST00000363776 113 ntBASIC1.31□□□□□ -2.2
CDKL5O76039 RNU1-36P-201ENST00000365130 165 ntBASIC1.31□□□□□ -2.2
CDKL5O76039 Y_RNA.567-201ENST00000384736 106 ntBASIC1.31□□□□□ -2.2
CDKL5O76039 Y_RNA.588-201ENST00000391254 102 ntBASIC1.31□□□□□ -2.2
CDKL5O76039 RNU6ATAC8P-201ENST00000408460 126 ntBASIC1.31□□□□□ -2.2
Retrieved 100 of 98,524 protein–RNA pairs in 106.7 ms