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Protein–RNA interactions for Protein: O75631
UPK3A, Uroplakin-3a, human
Predictions only
Length
287 aa
.
Download Table
Protein
RNA
Prediction (catRAPID)
Interaction (ENCODE eCLIP)
Gene
UniProt Accession
Transcript Symbol
Ensembl Transcript ID
Length
Transcript Status
Prediction Score
Prediction z-Score
p-Value
Fold Change
UPK3A
O75631
MIR4636-201
ENST00000582271
80 nt
BASIC
-0.23
□□□□□ -2.45
UPK3A
O75631
AL360085.1-201
ENST00000604713
532 nt
BASIC
-0.23
□□□□□ -2.45
UPK3A
O75631
MIR1295B-201
ENST00000636144
60 nt
BASIC
-0.23
□□□□□ -2.45
UPK3A
O75631
RNU6-275P-201
ENST00000364910
107 nt
BASIC
-0.24
□□□□□ -2.45
UPK3A
O75631
Y_RNA.531-201
ENST00000384589
121 nt
BASIC
-0.24
□□□□□ -2.45
UPK3A
O75631
Y_RNA.549-201
ENST00000384657
102 nt
BASIC
-0.24
□□□□□ -2.45
UPK3A
O75631
MIR1265-201
ENST00000408444
86 nt
BASIC
-0.24
□□□□□ -2.45
UPK3A
O75631
RNA5SP163-201
ENST00000410304
99 nt
BASIC
-0.24
□□□□□ -2.45
UPK3A
O75631
MIR5706-201
ENST00000579841
80 nt
BASIC
-0.24
□□□□□ -2.45
UPK3A
O75631
MIR4308-201
ENST00000580634
81 nt
BASIC
-0.24
□□□□□ -2.45
UPK3A
O75631
U7.6-201
ENST00000610841
64 nt
BASIC
-0.24
□□□□□ -2.45
UPK3A
O75631
Clostridiales-1.4-201
ENST00000636807
150 nt
BASIC
-0.24
□□□□□ -2.45
UPK3A
O75631
Y_RNA.294-201
ENST00000364916
102 nt
BASIC
-0.25
□□□□□ -2.45
UPK3A
O75631
RNU6-756P-201
ENST00000383997
107 nt
BASIC
-0.25
□□□□□ -2.45
UPK3A
O75631
RNA5SP236-201
ENST00000516169
116 nt
BASIC
-0.25
□□□□□ -2.45
UPK3A
O75631
RNU2-35P-201
ENST00000516446
142 nt
BASIC
-0.25
□□□□□ -2.45
UPK3A
O75631
RNU6ATAC22P-201
ENST00000516794
89 nt
BASIC
-0.25
□□□□□ -2.45
UPK3A
O75631
SNORD27-201
ENST00000363981
72 nt
BASIC
-0.26
□□□□□ -2.45
UPK3A
O75631
Y_RNA.221-201
ENST00000364248
96 nt
BASIC
-0.26
□□□□□ -2.45
UPK3A
O75631
RNU6-429P-201
ENST00000384582
108 nt
BASIC
-0.26
□□□□□ -2.45
UPK3A
O75631
RNU6-269P-201
ENST00000391077
97 nt
BASIC
-0.26
□□□□□ -2.45
UPK3A
O75631
MIR548F4-201
ENST00000408515
105 nt
BASIC
-0.26
□□□□□ -2.45
UPK3A
O75631
RNU6-1265P-201
ENST00000516342
103 nt
BASIC
-0.26
□□□□□ -2.45
UPK3A
O75631
MIR4802-201
ENST00000581881
80 nt
BASIC
-0.26
□□□□□ -2.45
UPK3A
O75631
MIR548AD-201
ENST00000584780
82 nt
BASIC
-0.26
□□□□□ -2.45
UPK3A
O75631
RNU7-10P-201
ENST00000607194
63 nt
BASIC
-0.26
□□□□□ -2.45
UPK3A
O75631
Y_RNA.65-201
ENST00000362846
100 nt
BASIC
-0.27
□□□□□ -2.45
UPK3A
O75631
RNA5SP403-201
ENST00000363598
108 nt
BASIC
-0.27
□□□□□ -2.45
UPK3A
O75631
MTND2P23-201
ENST00000422990
651 nt
BASIC
-0.27
□□□□□ -2.45
UPK3A
O75631
SNORD127-201
ENST00000458892
86 nt
BASIC
-0.27
□□□□□ -2.45
UPK3A
O75631
AC104692.1-201
ENST00000472406
90 nt
BASIC
-0.27
□□□□□ -2.45
UPK3A
O75631
RNU6-240P-201
ENST00000516098
97 nt
BASIC
-0.27
□□□□□ -2.45
UPK3A
O75631
DEFB131B-201
ENST00000530210
213 nt
APPRIS P1
TSL 1 (best)
BASIC
-0.27
□□□□□ -2.45
UPK3A
O75631
U6.106-201
ENST00000636360
105 nt
BASIC
-0.27
□□□□□ -2.45
UPK3A
O75631
MIR6086-201
ENST00000638065
55 nt
BASIC
-0.27
□□□□□ -2.45
UPK3A
O75631
AC073869.9-201
ENST00000641610
120 nt
BASIC
-0.27
□□□□□ -2.45
UPK3A
O75631
Y_RNA.288-201
ENST00000364854
92 nt
BASIC
-0.28
□□□□□ -2.45
UPK3A
O75631
RNU6-1160P-201
ENST00000384546
104 nt
BASIC
-0.28
□□□□□ -2.45
UPK3A
O75631
MIR635-201
ENST00000384830
98 nt
BASIC
-0.28
□□□□□ -2.45
UPK3A
O75631
Y_RNA.626-201
ENST00000411288
95 nt
BASIC
-0.28
□□□□□ -2.45
UPK3A
O75631
RNU7-165P-201
ENST00000458864
60 nt
BASIC
-0.28
□□□□□ -2.45
UPK3A
O75631
AC138907.4-201
ENST00000570107
226 nt
BASIC
-0.28
□□□□□ -2.45
UPK3A
O75631
MIR4500-201
ENST00000579472
76 nt
BASIC
-0.28
□□□□□ -2.45
UPK3A
O75631
MIR4645-201
ENST00000583158
77 nt
BASIC
-0.28
□□□□□ -2.45
UPK3A
O75631
AC021443.1-201
ENST00000604478
211 nt
BASIC
-0.28
□□□□□ -2.45
UPK3A
O75631
Y_RNA.357-201
ENST00000365487
109 nt
BASIC
-0.29
□□□□□ -2.46
UPK3A
O75631
RNU6-768P-201
ENST00000384683
107 nt
BASIC
-0.29
□□□□□ -2.46
UPK3A
O75631
MIR599-201
ENST00000385069
95 nt
BASIC
-0.29
□□□□□ -2.46
UPK3A
O75631
RNU6-1321P-201
ENST00000390905
107 nt
BASIC
-0.29
□□□□□ -2.46
UPK3A
O75631
SNORD41.1-201
ENST00000391000
69 nt
BASIC
-0.29
□□□□□ -2.46
UPK3A
O75631
Z95118.1-201
ENST00000421372
247 nt
BASIC
-0.29
□□□□□ -2.46
UPK3A
O75631
RNU7-164P-201
ENST00000459221
62 nt
BASIC
-0.29
□□□□□ -2.46
UPK3A
O75631
MIR4677-201
ENST00000584153
80 nt
BASIC
-0.29
□□□□□ -2.46
UPK3A
O75631
AC011603.4-201
ENST00000611325
277 nt
BASIC
-0.29
□□□□□ -2.46
UPK3A
O75631
Y_RNA.47-201
ENST00000362697
108 nt
BASIC
-0.3
□□□□□ -2.46
UPK3A
O75631
Y_RNA.75-201
ENST00000362927
97 nt
BASIC
-0.3
□□□□□ -2.46
UPK3A
O75631
RNU6-161P-201
ENST00000363051
106 nt
BASIC
-0.3
□□□□□ -2.46
UPK3A
O75631
RNU6-1082P-201
ENST00000364574
107 nt
BASIC
-0.3
□□□□□ -2.46
UPK3A
O75631
RNU6-818P-201
ENST00000364837
108 nt
BASIC
-0.3
□□□□□ -2.46
UPK3A
O75631
Y_RNA.604-201
ENST00000410574
102 nt
BASIC
-0.3
□□□□□ -2.46
UPK3A
O75631
MIR1270-201
ENST00000459320
83 nt
BASIC
-0.3
□□□□□ -2.46
UPK3A
O75631
TRAJ51-201
ENST00000504127
63 nt
BASIC
-0.3
□□□□□ -2.46
UPK3A
O75631
AC097716.1-201
ENST00000509136
180 nt
TSL 2
BASIC
-0.3
□□□□□ -2.46
UPK3A
O75631
SCARNA11.2-201
ENST00000517183
154 nt
BASIC
-0.3
□□□□□ -2.46
UPK3A
O75631
RNU2-60P-201
ENST00000517290
128 nt
BASIC
-0.3
□□□□□ -2.46
UPK3A
O75631
EBAG9-207
ENST00000531677
777 nt
TSL 1 (best)
BASIC
-0.3
□□□□□ -2.46
UPK3A
O75631
AP001180.6-201
ENST00000584918
159 nt
BASIC
-0.3
□□□□□ -2.46
UPK3A
O75631
Y_RNA.149-201
ENST00000363558
117 nt
BASIC
-0.31
□□□□□ -2.46
UPK3A
O75631
RNU6-449P-201
ENST00000383914
107 nt
BASIC
-0.31
□□□□□ -2.46
UPK3A
O75631
Y_RNA.448-201
ENST00000384185
108 nt
BASIC
-0.31
□□□□□ -2.46
UPK3A
O75631
Y_RNA.477-201
ENST00000384352
108 nt
BASIC
-0.31
□□□□□ -2.46
UPK3A
O75631
RNU4-69P-201
ENST00000410677
143 nt
BASIC
-0.31
□□□□□ -2.46
UPK3A
O75631
AC006210.1-201
ENST00000424882
111 nt
BASIC
-0.31
□□□□□ -2.46
UPK3A
O75631
MTATP6P21-201
ENST00000440681
189 nt
BASIC
-0.31
□□□□□ -2.46
UPK3A
O75631
IGHVII-40-1-201
ENST00000517316
58 nt
BASIC
-0.31
□□□□□ -2.46
UPK3A
O75631
AL117187.1-201
ENST00000555482
181 nt
BASIC
-0.31
□□□□□ -2.46
UPK3A
O75631
MIR3925-201
ENST00000584674
77 nt
BASIC
-0.31
□□□□□ -2.46
UPK3A
O75631
uc_338.28-201
ENST00000612082
187 nt
BASIC
-0.31
□□□□□ -2.46
UPK3A
O75631
CCDC7-215
ENST00000639629
4158 nt
APPRIS ALT2
TSL 5
BASIC
-0.32
□□□□□ -2.46
UPK3A
O75631
MIR206-201
ENST00000384872
86 nt
BASIC
-0.32
□□□□□ -2.46
UPK3A
O75631
SNORA75.1-201
ENST00000391130
148 nt
BASIC
-0.32
□□□□□ -2.46
UPK3A
O75631
SNORD110-201
ENST00000408189
75 nt
BASIC
-0.32
□□□□□ -2.46
UPK3A
O75631
Y_RNA.793-201
ENST00000411222
111 nt
BASIC
-0.32
□□□□□ -2.46
UPK3A
O75631
AC097635.1-201
ENST00000450678
155 nt
BASIC
-0.32
□□□□□ -2.46
UPK3A
O75631
RNU7-48P-201
ENST00000458875
63 nt
BASIC
-0.32
□□□□□ -2.46
UPK3A
O75631
RNU7-123P-201
ENST00000515911
60 nt
BASIC
-0.32
□□□□□ -2.46
UPK3A
O75631
AC008737.2-201
ENST00000599446
118 nt
BASIC
-0.32
□□□□□ -2.46
UPK3A
O75631
MIR6514-201
ENST00000622549
70 nt
BASIC
-0.32
□□□□□ -2.46
UPK3A
O75631
SNORD114-28-201
ENST00000363610
72 nt
BASIC
-0.33
□□□□□ -2.46
UPK3A
O75631
Y_RNA.562-201
ENST00000384695
113 nt
BASIC
-0.33
□□□□□ -2.46
UPK3A
O75631
MIR606-201
ENST00000384851
96 nt
BASIC
-0.33
□□□□□ -2.46
UPK3A
O75631
BX276092.1-201
ENST00000427368
251 nt
BASIC
-0.33
□□□□□ -2.46
UPK3A
O75631
RNA5SP476-201
ENST00000516613
103 nt
BASIC
-0.33
□□□□□ -2.46
UPK3A
O75631
NAMPTP3-201
ENST00000569273
224 nt
BASIC
-0.33
□□□□□ -2.46
UPK3A
O75631
Y_RNA.11-201
ENST00000362375
109 nt
BASIC
-0.34
□□□□□ -2.46
UPK3A
O75631
Y_RNA.98-201
ENST00000363109
102 nt
BASIC
-0.34
□□□□□ -2.46
UPK3A
O75631
Y_RNA.299-201
ENST00000364973
94 nt
BASIC
-0.34
□□□□□ -2.46
UPK3A
O75631
Y_RNA.326-201
ENST00000365176
113 nt
BASIC
-0.34
□□□□□ -2.46
UPK3A
O75631
SNORD114-12-201
ENST00000365400
75 nt
BASIC
-0.34
□□□□□ -2.46
UPK3A
O75631
SNORD77B-201
ENST00000391112
67 nt
BASIC
-0.34
□□□□□ -2.46
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