Protein–RNA interactions for Protein: O75379

VAMP4, Vesicle-associated membrane protein 4, humanhuman

Predictions only

Length 141 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP4O75379 AC048334.1-201ENST00000477975 159 ntBASIC1.69□□□□□ -2.14
VAMP4O75379 RNU6-795P-201ENST00000516323 103 ntBASIC1.69□□□□□ -2.14
VAMP4O75379 MIR4498-201ENST00000577599 66 ntBASIC1.69□□□□□ -2.14
VAMP4O75379 snoU13.31-201ENST00000607291 104 ntBASIC1.69□□□□□ -2.14
VAMP4O75379 AP001362.1-201ENST00000625165 124 ntBASIC1.69□□□□□ -2.14
VAMP4O75379 Y_RNA.247-201ENST00000364500 92 ntBASIC1.68□□□□□ -2.14
VAMP4O75379 MIR758-201ENST00000390227 88 ntBASIC1.68□□□□□ -2.14
VAMP4O75379 RPS29P28-201ENST00000446439 141 ntBASIC1.68□□□□□ -2.14
VAMP4O75379 Y_RNA.659-201ENST00000515994 113 ntBASIC1.68□□□□□ -2.14
VAMP4O75379 RNU1-92P-201ENST00000517017 135 ntBASIC1.68□□□□□ -2.14
VAMP4O75379 MIR4777-201ENST00000583710 86 ntBASIC1.68□□□□□ -2.14
VAMP4O75379 Y_RNA.342-201ENST00000365352 113 ntBASIC1.67□□□□□ -2.14
VAMP4O75379 MIR488-201ENST00000365739 83 ntBASIC1.67□□□□□ -2.14
VAMP4O75379 SNORD38.2-201ENST00000384470 69 ntBASIC1.67□□□□□ -2.14
VAMP4O75379 SNORA40.6-201ENST00000391153 128 ntBASIC1.67□□□□□ -2.14
VAMP4O75379 AC091304.10-201ENST00000641554 121 ntBASIC1.67□□□□□ -2.14
VAMP4O75379 Y_RNA.220-201ENST00000364244 109 ntBASIC1.66□□□□□ -2.14
VAMP4O75379 U8.15-201ENST00000390947 134 ntBASIC1.66□□□□□ -2.14
VAMP4O75379 RNA5SP247-201ENST00000411181 105 ntBASIC1.66□□□□□ -2.14
VAMP4O75379 SNORA31.2-201ENST00000516019 134 ntBASIC1.66□□□□□ -2.14
VAMP4O75379 RNU6-90P-201ENST00000606352 106 ntBASIC1.66□□□□□ -2.14
VAMP4O75379 MALAT1.1-201ENST00000618249 95 ntBASIC1.66□□□□□ -2.14
VAMP4O75379 MIR548G-201ENST00000408442 89 ntBASIC1.65□□□□□ -2.15
VAMP4O75379 AL135923.1-201ENST00000413066 196 ntTSL 3 BASIC1.65□□□□□ -2.15
VAMP4O75379 MRPL35P3-201ENST00000421557 364 ntBASIC1.65□□□□□ -2.15
VAMP4O75379 RNU6-1053P-201ENST00000515930 101 ntBASIC1.65□□□□□ -2.15
VAMP4O75379 uc_338.6-201ENST00000613544 171 ntBASIC1.65□□□□□ -2.15
VAMP4O75379 AC012676.2-201ENST00000619258 186 ntBASIC1.65□□□□□ -2.15
VAMP4O75379 NFIA-AS1-206ENST00000630199 220 ntTSL 5 BASIC1.65□□□□□ -2.15
VAMP4O75379 ABCA5-201ENST00000392676 8220 ntAPPRIS P1 TSL 1 (best) BASIC1.65□□□□□ -2.15
VAMP4O75379 HSBP1P2-201ENST00000299671 229 ntBASIC1.64□□□□□ -2.15
VAMP4O75379 RNU6-1163P-201ENST00000364516 107 ntBASIC1.64□□□□□ -2.15
VAMP4O75379 SNORD113.3-201ENST00000364630 78 ntBASIC1.64□□□□□ -2.15
VAMP4O75379 RNU6-1131P-201ENST00000364955 107 ntBASIC1.64□□□□□ -2.15
VAMP4O75379 RNU6-49P-201ENST00000384256 107 ntBASIC1.64□□□□□ -2.15
VAMP4O75379 RNU6ATAC3P-201ENST00000387974 126 ntBASIC1.64□□□□□ -2.15
VAMP4O75379 RNU6-644P-201ENST00000391155 98 ntBASIC1.64□□□□□ -2.15
VAMP4O75379 RNU6-972P-201ENST00000391208 107 ntBASIC1.64□□□□□ -2.15
VAMP4O75379 RNA5SP95-201ENST00000410319 137 ntBASIC1.64□□□□□ -2.15
VAMP4O75379 AC109327.2-201ENST00000448339 378 ntBASIC1.64□□□□□ -2.15
VAMP4O75379 RNU7-61P-201ENST00000515897 61 ntBASIC1.64□□□□□ -2.15
VAMP4O75379 Y_RNA.705-201ENST00000516862 110 ntBASIC1.64□□□□□ -2.15
VAMP4O75379 AC138749.4-201ENST00000563970 127 ntBASIC1.64□□□□□ -2.15
VAMP4O75379 MIR548Z-201ENST00000584743 97 ntBASIC1.64□□□□□ -2.15
VAMP4O75379 MIR7974-201ENST00000615835 79 ntBASIC1.64□□□□□ -2.15
VAMP4O75379 AC008163.1-202ENST00000636004 2889 ntBASIC1.64□□□□□ -2.15
VAMP4O75379 Y_RNA.363-201ENST00000365529 113 ntBASIC1.63□□□□□ -2.15
VAMP4O75379 RNU6-813P-201ENST00000384691 107 ntBASIC1.63□□□□□ -2.15
VAMP4O75379 NMTRQ-TTG12-1-201ENST00000467595 72 ntBASIC1.63□□□□□ -2.15
VAMP4O75379 AC036111.3-201ENST00000526389 112 ntBASIC1.63□□□□□ -2.15
VAMP4O75379 AL353770.2-201ENST00000620024 78 ntBASIC1.63□□□□□ -2.15
VAMP4O75379 MGAT4C-209ENST00000611864 25116 ntAPPRIS P1 TSL 5 BASIC1.62□□□□□ -2.15
VAMP4O75379 Y_RNA.173-201ENST00000363776 113 ntBASIC1.62□□□□□ -2.15
VAMP4O75379 RNU6-294P-201ENST00000364999 102 ntBASIC1.62□□□□□ -2.15
VAMP4O75379 SNORA80D-201ENST00000384488 135 ntBASIC1.62□□□□□ -2.15
VAMP4O75379 TRAJ1-201ENST00000390536 62 ntAPPRIS P1 BASIC1.62□□□□□ -2.15
VAMP4O75379 SNORA75.2-201ENST00000391138 150 ntBASIC1.62□□□□□ -2.15
VAMP4O75379 SNORA75.3-201ENST00000391231 150 ntBASIC1.62□□□□□ -2.15
VAMP4O75379 SNORD111-201ENST00000408139 94 ntBASIC1.62□□□□□ -2.15
VAMP4O75379 AL591704.2-201ENST00000421658 181 ntBASIC1.62□□□□□ -2.15
VAMP4O75379 COX7A2-206ENST00000472311 325 ntTSL 2 BASIC1.62□□□□□ -2.15
VAMP4O75379 RNU6-844P-201ENST00000517175 102 ntBASIC1.62□□□□□ -2.15
VAMP4O75379 MIR4679-1-201ENST00000637619 75 ntBASIC1.62□□□□□ -2.15
VAMP4O75379 ANGPTL3-201ENST00000371129 2805 ntAPPRIS P1 TSL 1 (best) BASIC1.62□□□□□ -2.15
VAMP4O75379 MIR26B-201ENST00000362251 77 ntBASIC1.61□□□□□ -2.15
VAMP4O75379 RNY1P10-201ENST00000363268 113 ntBASIC1.61□□□□□ -2.15
VAMP4O75379 Y_RNA.467-201ENST00000384297 102 ntBASIC1.61□□□□□ -2.15
VAMP4O75379 SNORA2B-201ENST00000384583 137 ntBASIC1.61□□□□□ -2.15
VAMP4O75379 Y_RNA.567-201ENST00000384736 106 ntBASIC1.61□□□□□ -2.15
VAMP4O75379 ZNF468-202ENST00000396409 384 ntTSL 5 BASIC1.61□□□□□ -2.15
VAMP4O75379 RNU6-887P-201ENST00000410660 100 ntBASIC1.61□□□□□ -2.15
VAMP4O75379 RNU7-21P-201ENST00000459430 62 ntBASIC1.61□□□□□ -2.15
VAMP4O75379 RNU6-86P-201ENST00000606534 107 ntBASIC1.61□□□□□ -2.15
VAMP4O75379 C9orf84-205ENST00000394779 5060 ntAPPRIS ALT2 TSL 2 BASIC1.61□□□□□ -2.15
VAMP4O75379 Y_RNA.290-201ENST00000364879 114 ntBASIC1.6□□□□□ -2.15
VAMP4O75379 MTND5P40-201ENST00000559945 246 ntBASIC1.6□□□□□ -2.15
VAMP4O75379 AC106800.4-201ENST00000614905 153 ntBASIC1.6□□□□□ -2.15
VAMP4O75379 U7.3-201ENST00000616123 62 ntBASIC1.6□□□□□ -2.15
VAMP4O75379 Y_RNA.330-201ENST00000365230 109 ntBASIC1.59□□□□□ -2.15
VAMP4O75379 SPINT5P-201ENST00000448174 155 ntBASIC1.59□□□□□ -2.15
VAMP4O75379 SNORD79.1-201ENST00000516069 84 ntBASIC1.59□□□□□ -2.15
VAMP4O75379 MIR4491-201ENST00000581087 68 ntBASIC1.59□□□□□ -2.15
VAMP4O75379 ST7-OT3_3.1-201ENST00000611709 115 ntBASIC1.59□□□□□ -2.15
VAMP4O75379 Y_RNA.119-201ENST00000363301 96 ntBASIC1.58□□□□□ -2.16
VAMP4O75379 RNA5SP133-201ENST00000363368 119 ntBASIC1.58□□□□□ -2.16
VAMP4O75379 RNU1-36P-201ENST00000365130 165 ntBASIC1.58□□□□□ -2.16
VAMP4O75379 RNY1P7-201ENST00000384743 110 ntBASIC1.58□□□□□ -2.16
VAMP4O75379 MIR150-201ENST00000385048 84 ntBASIC1.58□□□□□ -2.16
VAMP4O75379 RNU6-910P-201ENST00000390844 107 ntBASIC1.58□□□□□ -2.16
VAMP4O75379 RNU6ATAC6P-201ENST00000408132 126 ntBASIC1.58□□□□□ -2.16
VAMP4O75379 SNORD93-201ENST00000408813 74 ntBASIC1.58□□□□□ -2.16
VAMP4O75379 AL359821.1-201ENST00000605519 182 ntBASIC1.58□□□□□ -2.16
VAMP4O75379 U6.109-201ENST00000636749 87 ntBASIC1.58□□□□□ -2.16
VAMP4O75379 RNU6-1244P-201ENST00000363614 108 ntBASIC1.57□□□□□ -2.16
VAMP4O75379 SNORA25.8-201ENST00000364831 128 ntBASIC1.57□□□□□ -2.16
VAMP4O75379 RNU6-934P-201ENST00000365154 107 ntBASIC1.57□□□□□ -2.16
VAMP4O75379 SNORD58A-201ENST00000383875 65 ntBASIC1.57□□□□□ -2.16
VAMP4O75379 Y_RNA.558-201ENST00000384685 113 ntBASIC1.57□□□□□ -2.16
VAMP4O75379 Y_RNA.588-201ENST00000391254 102 ntBASIC1.57□□□□□ -2.16
VAMP4O75379 RNU6ATAC8P-201ENST00000408460 126 ntBASIC1.57□□□□□ -2.16
Retrieved 100 of 98,524 protein–RNA pairs in 311.3 ms