Protein–RNA interactions for Protein: O43707

ACTN4, Alpha-actinin-4, humanhuman

Known RBP Predictions only

Length 911 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN4O43707 RNU6-895P-201ENST00000384125 103 ntBASIC2.65□□□□□ -1.99
ACTN4O43707 RNU6-987P-201ENST00000384759 104 ntBASIC2.65□□□□□ -1.99
ACTN4O43707 RNU4ATAC16P-201ENST00000408512 126 ntBASIC2.65□□□□□ -1.99
ACTN4O43707 JTBP1-201ENST00000441314 247 ntBASIC2.65□□□□□ -1.99
ACTN4O43707 UBE2DNL-203ENST00000474922 222 ntBASIC2.65□□□□□ -1.99
ACTN4O43707 Y_RNA.809-201ENST00000516058 95 ntBASIC2.65□□□□□ -1.99
ACTN4O43707 AC024382.1-201ENST00000520224 292 ntTSL 3 BASIC2.65□□□□□ -1.99
ACTN4O43707 AC005520.4-201ENST00000604337 90 ntBASIC2.65□□□□□ -1.99
ACTN4O43707 GHRLOS.1-201ENST00000610995 70 ntBASIC2.65□□□□□ -1.99
ACTN4O43707 MIR6852-201ENST00000621699 66 ntBASIC2.65□□□□□ -1.99
ACTN4O43707 AC068733.3-201ENST00000632757 269 ntTSL 3 BASIC2.65□□□□□ -1.99
ACTN4O43707 AC080100.1-201ENST00000624239 5356 ntBASIC2.64□□□□□ -1.99
ACTN4O43707 U8.13-201ENST00000390842 128 ntBASIC2.64□□□□□ -1.99
ACTN4O43707 MIR18B-201ENST00000454574 71 ntBASIC2.64□□□□□ -1.99
ACTN4O43707 RNA5SP82-201ENST00000516707 92 ntBASIC2.64□□□□□ -1.99
ACTN4O43707 SNORA31.25-201ENST00000517242 134 ntBASIC2.64□□□□□ -1.99
ACTN4O43707 MIR3675-201ENST00000583661 73 ntBASIC2.64□□□□□ -1.99
ACTN4O43707 AC013244.2-201ENST00000603396 103 ntBASIC2.64□□□□□ -1.99
ACTN4O43707 PCDH11Y-203ENST00000362095 4220 ntAPPRIS ALT2 TSL 1 (best) BASIC2.63□□□□□ -1.99
ACTN4O43707 MYSM1-208ENST00000622766 6020 ntTSL 1 (best) BASIC2.63□□□□□ -1.99
ACTN4O43707 TXLNGY-201ENST00000253320 7299 ntTSL 2 BASIC2.63□□□□□ -1.99
ACTN4O43707 MIR377-201ENST00000362145 69 ntBASIC2.63□□□□□ -1.99
ACTN4O43707 SNORD101-201ENST00000384027 73 ntBASIC2.63□□□□□ -1.99
ACTN4O43707 RNU4-37P-201ENST00000410214 84 ntBASIC2.63□□□□□ -1.99
ACTN4O43707 AL606490.4-201ENST00000423117 127 ntBASIC2.63□□□□□ -1.99
ACTN4O43707 RNU6ATAC9P-201ENST00000516210 116 ntBASIC2.63□□□□□ -1.99
ACTN4O43707 AC046143.2-201ENST00000609789 160 ntBASIC2.63□□□□□ -1.99
ACTN4O43707 LRRCC1-202ENST00000414626 4493 ntAPPRIS ALT2 TSL 1 (best) BASIC2.63□□□□□ -1.99
ACTN4O43707 RNU6-664P-201ENST00000362381 107 ntBASIC2.62□□□□□ -1.99
ACTN4O43707 MIR519A1-201ENST00000385257 85 ntBASIC2.62□□□□□ -1.99
ACTN4O43707 RNU6-630P-201ENST00000391258 106 ntBASIC2.62□□□□□ -1.99
ACTN4O43707 MIR3140-201ENST00000583685 90 ntBASIC2.62□□□□□ -1.99
ACTN4O43707 RNU6-1260P-201ENST00000362944 107 ntBASIC2.61□□□□□ -1.99
ACTN4O43707 RNU6ATAC37P-201ENST00000408328 131 ntBASIC2.61□□□□□ -1.99
ACTN4O43707 snoU13.25-201ENST00000458945 104 ntBASIC2.61□□□□□ -1.99
ACTN4O43707 AL133373.1-201ENST00000497098 94 ntBASIC2.61□□□□□ -1.99
ACTN4O43707 MIR4696-201ENST00000581431 70 ntBASIC2.61□□□□□ -1.99
ACTN4O43707 DLEU2_3.1-201ENST00000620005 73 ntBASIC2.61□□□□□ -1.99
ACTN4O43707 SAMD9L-201ENST00000318238 7134 ntAPPRIS P1 TSL 1 (best) BASIC2.6□□□□□ -1.99
ACTN4O43707 MIR103A2-201ENST00000362154 78 ntBASIC2.6□□□□□ -1.99
ACTN4O43707 RNA5SP95-201ENST00000410319 137 ntBASIC2.6□□□□□ -1.99
ACTN4O43707 AC244636.1-201ENST00000421152 228 ntBASIC2.6□□□□□ -1.99
ACTN4O43707 RNU2-19P-201ENST00000517288 84 ntBASIC2.6□□□□□ -1.99
ACTN4O43707 MIR5007-201ENST00000583098 95 ntBASIC2.6□□□□□ -1.99
ACTN4O43707 DNAH7-201ENST00000312428 12394 ntAPPRIS P1 TSL 1 (best) BASIC2.6□□□□□ -1.99
ACTN4O43707 RGPD1-204ENST00000559485 5247 ntAPPRIS P2 TSL 1 (best) BASIC2.6□□□□□ -1.99
ACTN4O43707 Y_RNA.56-201ENST00000362798 112 ntBASIC2.59□□□□□ -1.99
ACTN4O43707 SNORA3A-201ENST00000364113 130 ntBASIC2.59□□□□□ -1.99
ACTN4O43707 RNU6-654P-201ENST00000364373 107 ntBASIC2.59□□□□□ -1.99
ACTN4O43707 SNORD114-30-201ENST00000364448 72 ntBASIC2.59□□□□□ -1.99
ACTN4O43707 SNORA67.1-201ENST00000364749 141 ntBASIC2.59□□□□□ -1.99
ACTN4O43707 MIR9-2-201ENST00000384838 87 ntBASIC2.59□□□□□ -1.99
ACTN4O43707 MIR1185-1-201ENST00000408598 86 ntBASIC2.59□□□□□ -1.99
ACTN4O43707 Y_RNA.606-201ENST00000410579 103 ntBASIC2.59□□□□□ -1.99
ACTN4O43707 AC092628.1-201ENST00000436250 252 ntBASIC2.59□□□□□ -1.99
ACTN4O43707 RNU7-193P-201ENST00000516723 65 ntBASIC2.59□□□□□ -1.99
ACTN4O43707 MIR5089-201ENST00000580047 84 ntBASIC2.59□□□□□ -1.99
ACTN4O43707 MIR4298-201ENST00000584380 73 ntBASIC2.59□□□□□ -1.99
ACTN4O43707 MIR6766-201ENST00000622641 72 ntBASIC2.59□□□□□ -1.99
ACTN4O43707 TTK-202ENST00000369798 3010 ntAPPRIS P3 TSL 1 (best) BASIC2.59□□□□□ -2
ACTN4O43707 AC130466.1-201ENST00000636354 4683 ntTSL 5 BASIC2.59□□□□□ -2
ACTN4O43707 CCPG1-203ENST00000442196 3453 ntAPPRIS P1 TSL 2 BASIC2.58□□□□□ -2
ACTN4O43707 C9orf84-205ENST00000394779 5060 ntAPPRIS ALT2 TSL 2 BASIC2.58□□□□□ -2
ACTN4O43707 SNORA25.4-201ENST00000363666 124 ntBASIC2.58□□□□□ -2
ACTN4O43707 MIR144-201ENST00000384886 86 ntBASIC2.58□□□□□ -2
ACTN4O43707 AL513328.1-201ENST00000446460 224 ntBASIC2.58□□□□□ -2
ACTN4O43707 RNU6-250P-201ENST00000516958 103 ntBASIC2.58□□□□□ -2
ACTN4O43707 MIR3162-201ENST00000581818 82 ntBASIC2.58□□□□□ -2
ACTN4O43707 AC032019.2-201ENST00000584916 403 ntTSL 5 BASIC2.58□□□□□ -2
ACTN4O43707 AL627230.6-201ENST00000611129 280 ntBASIC2.58□□□□□ -2
ACTN4O43707 U6.100-201ENST00000636230 99 ntBASIC2.58□□□□□ -2
ACTN4O43707 AC023934.1-201ENST00000574529 2389 ntBASIC2.57□□□□□ -2
ACTN4O43707 AL596028.1-201ENST00000326971 197 ntBASIC2.57□□□□□ -2
ACTN4O43707 MIR337-201ENST00000362281 93 ntBASIC2.57□□□□□ -2
ACTN4O43707 RNU6-580P-201ENST00000365159 107 ntBASIC2.57□□□□□ -2
ACTN4O43707 RNU6-439P-201ENST00000384188 106 ntBASIC2.57□□□□□ -2
ACTN4O43707 SNORD45A-201ENST00000384512 84 ntBASIC2.57□□□□□ -2
ACTN4O43707 TRAJ30-201ENST00000390507 57 ntAPPRIS P1 BASIC2.57□□□□□ -2
ACTN4O43707 AC097510.1-201ENST00000510945 133 ntBASIC2.57□□□□□ -2
ACTN4O43707 AP003716.2-201ENST00000528260 108 ntBASIC2.57□□□□□ -2
ACTN4O43707 MIR8053-201ENST00000613344 75 ntBASIC2.57□□□□□ -2
ACTN4O43707 MIR6895-201ENST00000613497 78 ntBASIC2.57□□□□□ -2
ACTN4O43707 COMMD6-213ENST00000626103 120 ntTSL 5 BASIC2.57□□□□□ -2
ACTN4O43707 RNA5SP264-201ENST00000363115 107 ntBASIC2.56□□□□□ -2
ACTN4O43707 Y_RNA.443-201ENST00000384135 111 ntBASIC2.56□□□□□ -2
ACTN4O43707 RNU6-1054P-201ENST00000411293 104 ntBASIC2.56□□□□□ -2
ACTN4O43707 Y_RNA.697-201ENST00000516776 113 ntBASIC2.56□□□□□ -2
ACTN4O43707 RNU6-881P-201ENST00000516813 102 ntBASIC2.56□□□□□ -2
ACTN4O43707 5S_rRNA.15-201ENST00000611169 127 ntBASIC2.56□□□□□ -2
ACTN4O43707 STX7-202ENST00000367941 15791 ntAPPRIS P1 TSL 1 (best) BASIC2.55□□□□□ -2
ACTN4O43707 Y_RNA.13-201ENST00000362403 112 ntBASIC2.55□□□□□ -2
ACTN4O43707 SNORD45.1-201ENST00000363181 77 ntBASIC2.55□□□□□ -2
ACTN4O43707 SNORA6-201ENST00000384033 151 ntBASIC2.55□□□□□ -2
ACTN4O43707 SNRPGP19-201ENST00000603826 189 ntBASIC2.55□□□□□ -2
ACTN4O43707 MIR6082-201ENST00000613604 109 ntBASIC2.55□□□□□ -2
ACTN4O43707 MIPOL1-203ENST00000537471 5954 ntAPPRIS P1 TSL 5 BASIC2.54□□□□□ -2
ACTN4O43707 KNL1-204ENST00000527044 5404 ntTSL 5 BASIC2.54□□□□□ -2
ACTN4O43707 RNA5SP289-201ENST00000362332 137 ntBASIC2.54□□□□□ -2
ACTN4O43707 RNU6-499P-201ENST00000365615 107 ntBASIC2.54□□□□□ -2
ACTN4O43707 MIR1257-201ENST00000408490 117 ntBASIC2.54□□□□□ -2
Retrieved 100 of 98,524 protein–RNA pairs in 356.8 ms