Protein–RNA interactions for Protein: O43679

LDB2, LIM domain-binding protein 2, humanhuman

Predictions only

Length 373 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LDB2O43679 U6.70-201ENST00000620287 104 ntBASIC0.94□□□□□ -2.26
LDB2O43679 AL589743.1-201ENST00000551932 2712 ntBASIC0.94□□□□□ -2.26
LDB2O43679 SNORD115-35-201ENST00000365122 82 ntBASIC0.93□□□□□ -2.26
LDB2O43679 SNORA22-201ENST00000383907 134 ntBASIC0.93□□□□□ -2.26
LDB2O43679 MIR125B2-201ENST00000385128 89 ntBASIC0.93□□□□□ -2.26
LDB2O43679 AC096949.1-201ENST00000412047 152 ntBASIC0.93□□□□□ -2.26
LDB2O43679 AC012668.1-201ENST00000457625 228 ntTSL 3 BASIC0.93□□□□□ -2.26
LDB2O43679 U7.7-201ENST00000459276 60 ntBASIC0.93□□□□□ -2.26
LDB2O43679 RPL39P34-201ENST00000477141 156 ntBASIC0.93□□□□□ -2.26
LDB2O43679 UBL5P1-201ENST00000507979 193 ntBASIC0.93□□□□□ -2.26
LDB2O43679 RNU6-1110P-201ENST00000516462 101 ntBASIC0.93□□□□□ -2.26
LDB2O43679 AC133485.1-201ENST00000567176 124 ntBASIC0.93□□□□□ -2.26
LDB2O43679 AC090616.3-202ENST00000583346 205 ntTSL 2 BASIC0.93□□□□□ -2.26
LDB2O43679 AL035470.1-201ENST00000622571 220 ntBASIC0.93□□□□□ -2.26
LDB2O43679 MIR1255B1-201ENST00000636325 63 ntBASIC0.93□□□□□ -2.26
LDB2O43679 Y_RNA.549-201ENST00000384657 102 ntBASIC0.92□□□□□ -2.26
LDB2O43679 RNU6-977P-201ENST00000516411 103 ntBASIC0.92□□□□□ -2.26
LDB2O43679 AC105081.1-201ENST00000617727 106 ntBASIC0.92□□□□□ -2.26
LDB2O43679 AL162726.3-218ENST00000636401 95 ntBASIC0.92□□□□□ -2.26
LDB2O43679 LMBR1-222ENST00000638959 93 ntTSL 5 BASIC0.92□□□□□ -2.26
LDB2O43679 RNU6-363P-201ENST00000362895 105 ntBASIC0.91□□□□□ -2.26
LDB2O43679 RNU6-1290P-201ENST00000362957 109 ntBASIC0.91□□□□□ -2.26
LDB2O43679 Y_RNA.85-201ENST00000363014 111 ntBASIC0.91□□□□□ -2.26
LDB2O43679 RNU4-67P-201ENST00000364569 141 ntBASIC0.91□□□□□ -2.26
LDB2O43679 Y_RNA.281-201ENST00000364774 94 ntBASIC0.91□□□□□ -2.26
LDB2O43679 Y_RNA.309-201ENST00000365046 111 ntBASIC0.91□□□□□ -2.26
LDB2O43679 Y_RNA.448-201ENST00000384185 108 ntBASIC0.91□□□□□ -2.26
LDB2O43679 MIR532-201ENST00000385025 91 ntBASIC0.91□□□□□ -2.26
LDB2O43679 RNU6-1321P-201ENST00000390905 107 ntBASIC0.91□□□□□ -2.26
LDB2O43679 SNORD89-201ENST00000390981 114 ntBASIC0.91□□□□□ -2.26
LDB2O43679 Y_RNA.588-201ENST00000391254 102 ntBASIC0.91□□□□□ -2.26
LDB2O43679 MIR938-201ENST00000401216 83 ntBASIC0.91□□□□□ -2.26
LDB2O43679 RNU6ATAC41P-201ENST00000408600 126 ntBASIC0.91□□□□□ -2.26
LDB2O43679 MIR548J-201ENST00000408833 112 ntBASIC0.91□□□□□ -2.26
LDB2O43679 MIR1912-201ENST00000410389 80 ntBASIC0.91□□□□□ -2.26
LDB2O43679 RNU4-83P-201ENST00000410863 133 ntBASIC0.91□□□□□ -2.26
LDB2O43679 RNU6-412P-201ENST00000516434 106 ntBASIC0.91□□□□□ -2.26
LDB2O43679 MIR4804-201ENST00000581683 73 ntBASIC0.91□□□□□ -2.26
LDB2O43679 MIR6788-201ENST00000618842 66 ntBASIC0.91□□□□□ -2.26
LDB2O43679 OMD-201ENST00000375550 2449 ntAPPRIS P1 TSL 1 (best) BASIC0.9□□□□□ -2.26
LDB2O43679 Y_RNA.35-201ENST00000362601 101 ntBASIC0.9□□□□□ -2.27
LDB2O43679 SNORA63.5-201ENST00000363548 123 ntBASIC0.9□□□□□ -2.27
LDB2O43679 RNY1P2-201ENST00000364820 117 ntBASIC0.9□□□□□ -2.27
LDB2O43679 Y_RNA.507-201ENST00000384500 99 ntBASIC0.9□□□□□ -2.27
LDB2O43679 RNU6-816P-201ENST00000390914 107 ntBASIC0.9□□□□□ -2.27
LDB2O43679 RNU6-1268P-201ENST00000391214 107 ntBASIC0.9□□□□□ -2.27
LDB2O43679 RNU6-1239P-201ENST00000391310 107 ntBASIC0.9□□□□□ -2.27
LDB2O43679 AC079760.1-201ENST00000456952 202 ntTSL 3 BASIC0.9□□□□□ -2.27
LDB2O43679 RNU7-48P-201ENST00000458875 63 ntBASIC0.9□□□□□ -2.27
LDB2O43679 AC092892.1-201ENST00000496067 327 ntTSL 5 BASIC0.9□□□□□ -2.27
LDB2O43679 RNU6-521P-201ENST00000516663 105 ntBASIC0.9□□□□□ -2.27
LDB2O43679 MIR4491-201ENST00000581087 68 ntBASIC0.9□□□□□ -2.27
LDB2O43679 MIR151B-201ENST00000584249 96 ntBASIC0.9□□□□□ -2.27
LDB2O43679 SNORD92-201ENST00000585078 85 ntBASIC0.9□□□□□ -2.27
LDB2O43679 MIR6129-201ENST00000616087 109 ntBASIC0.9□□□□□ -2.27
LDB2O43679 Y_RNA.98-201ENST00000363109 102 ntBASIC0.89□□□□□ -2.27
LDB2O43679 RNA5SP133-201ENST00000363368 119 ntBASIC0.89□□□□□ -2.27
LDB2O43679 RNU6-865P-201ENST00000364772 107 ntBASIC0.89□□□□□ -2.27
LDB2O43679 RNU6-409P-201ENST00000384114 104 ntBASIC0.89□□□□□ -2.27
LDB2O43679 RNU6-364P-201ENST00000384387 107 ntBASIC0.89□□□□□ -2.27
LDB2O43679 RNU6-429P-201ENST00000384582 108 ntBASIC0.89□□□□□ -2.27
LDB2O43679 TRAJ1-201ENST00000390536 62 ntAPPRIS P1 BASIC0.89□□□□□ -2.27
LDB2O43679 RNU6-1307P-201ENST00000391012 103 ntBASIC0.89□□□□□ -2.27
LDB2O43679 RNA5SP255-201ENST00000516370 107 ntBASIC0.89□□□□□ -2.27
LDB2O43679 RNU7-156P-201ENST00000517214 74 ntBASIC0.89□□□□□ -2.27
LDB2O43679 AC138749.4-201ENST00000563970 127 ntBASIC0.89□□□□□ -2.27
LDB2O43679 AC211469.2-201ENST00000605461 205 ntBASIC0.89□□□□□ -2.27
LDB2O43679 hsa-mir-4536-1.1-201ENST00000636519 88 ntBASIC0.89□□□□□ -2.27
LDB2O43679 U6.109-201ENST00000636749 87 ntBASIC0.89□□□□□ -2.27
LDB2O43679 Y_RNA.49-201ENST00000362714 112 ntBASIC0.88□□□□□ -2.27
LDB2O43679 RNU6-403P-201ENST00000363163 104 ntBASIC0.88□□□□□ -2.27
LDB2O43679 Y_RNA.155-201ENST00000363632 101 ntBASIC0.88□□□□□ -2.27
LDB2O43679 Y_RNA.328-201ENST00000365208 113 ntBASIC0.88□□□□□ -2.27
LDB2O43679 MIR520F-201ENST00000384824 87 ntBASIC0.88□□□□□ -2.27
LDB2O43679 RNU7-56P-201ENST00000458744 62 ntBASIC0.88□□□□□ -2.27
LDB2O43679 PDCD5P2-201ENST00000507570 312 ntBASIC0.88□□□□□ -2.27
LDB2O43679 RNU6-1223P-201ENST00000517124 104 ntBASIC0.88□□□□□ -2.27
LDB2O43679 AC068339.1-201ENST00000526965 141 ntBASIC0.88□□□□□ -2.27
LDB2O43679 MIR4698-201ENST00000577795 80 ntBASIC0.88□□□□□ -2.27
LDB2O43679 MIR3973-201ENST00000579824 107 ntBASIC0.88□□□□□ -2.27
LDB2O43679 MIR4661-201ENST00000582720 75 ntBASIC0.88□□□□□ -2.27
LDB2O43679 MIR8066-201ENST00000617280 78 ntBASIC0.88□□□□□ -2.27
LDB2O43679 MIR373-201ENST00000362273 69 ntBASIC0.87□□□□□ -2.27
LDB2O43679 RPS27-201ENST00000368567 350 ntAPPRIS P1 TSL 1 (best) BASIC0.87□□□□□ -2.27
LDB2O43679 SNORA72.6-201ENST00000384520 129 ntBASIC0.87□□□□□ -2.27
LDB2O43679 SNORD105-201ENST00000386910 85 ntBASIC0.87□□□□□ -2.27
LDB2O43679 RNU1-119P-201ENST00000391122 165 ntBASIC0.87□□□□□ -2.27
LDB2O43679 SNORA7.5-201ENST00000410672 110 ntBASIC0.87□□□□□ -2.27
LDB2O43679 RNU6-733P-201ENST00000410759 104 ntBASIC0.87□□□□□ -2.27
LDB2O43679 RNU7-102P-201ENST00000458948 62 ntBASIC0.87□□□□□ -2.27
LDB2O43679 RNU6-589P-201ENST00000516485 107 ntBASIC0.87□□□□□ -2.27
LDB2O43679 RNU6-765P-201ENST00000516916 99 ntBASIC0.87□□□□□ -2.27
LDB2O43679 AC025627.3-201ENST00000582078 182 ntBASIC0.87□□□□□ -2.27
LDB2O43679 MIR6857-201ENST00000613267 93 ntBASIC0.87□□□□□ -2.27
LDB2O43679 MIR6082-201ENST00000613604 109 ntBASIC0.87□□□□□ -2.27
LDB2O43679 AP001362.1-201ENST00000625165 124 ntBASIC0.87□□□□□ -2.27
LDB2O43679 CEP162-202ENST00000403245 5156 ntAPPRIS P1 TSL 5 BASIC0.86□□□□□ -2.27
LDB2O43679 Y_RNA.13-201ENST00000362403 112 ntBASIC0.86□□□□□ -2.27
LDB2O43679 RNU6-1313P-201ENST00000362622 102 ntBASIC0.86□□□□□ -2.27
LDB2O43679 Y_RNA.42-201ENST00000362660 108 ntBASIC0.86□□□□□ -2.27
Retrieved 100 of 98,524 protein–RNA pairs in 188.7 ms