Protein–RNA interactions for Protein: O43556

SGCE, Epsilon-sarcoglycan, humanhuman

Predictions only

Length 437 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SGCEO43556 SNORA32-201ENST00000384072 121 ntBASIC-1.1□□□□□ -2.59
SGCEO43556 RNU6-524P-201ENST00000384270 107 ntBASIC-1.1□□□□□ -2.59
SGCEO43556 Y_RNA.496-201ENST00000384444 101 ntBASIC-1.1□□□□□ -2.59
SGCEO43556 MIR518B-201ENST00000385127 83 ntBASIC-1.1□□□□□ -2.59
SGCEO43556 MT-TY-201ENST00000387409 66 ntBASIC-1.1□□□□□ -2.59
SGCEO43556 RNY4P36-201ENST00000391116 96 ntBASIC-1.1□□□□□ -2.59
SGCEO43556 RNA5SP144-201ENST00000410846 116 ntBASIC-1.1□□□□□ -2.59
SGCEO43556 AC098614.3-201ENST00000438957 440 ntBASIC-1.1□□□□□ -2.59
SGCEO43556 AC244090.1-201ENST00000441884 93 ntBASIC-1.1□□□□□ -2.59
SGCEO43556 AP000533.3-201ENST00000447704 118 ntBASIC-1.1□□□□□ -2.59
SGCEO43556 AC022137.1-201ENST00000483735 151 ntBASIC-1.1□□□□□ -2.59
SGCEO43556 RNU6-570P-201ENST00000517051 105 ntBASIC-1.1□□□□□ -2.59
SGCEO43556 AC026421.1-201ENST00000519101 163 ntBASIC-1.1□□□□□ -2.59
SGCEO43556 AL365205.2-201ENST00000594586 68 ntBASIC-1.1□□□□□ -2.59
SGCEO43556 SNORD58B-201ENST00000607313 66 ntBASIC-1.1□□□□□ -2.59
SGCEO43556 AL008718.3-201ENST00000610217 321 ntBASIC-1.1□□□□□ -2.59
SGCEO43556 snoU18.1-201ENST00000629629 71 ntBASIC-1.1□□□□□ -2.59
SGCEO43556 SNORA25.1-201ENST00000362326 128 ntBASIC-1.11□□□□□ -2.59
SGCEO43556 Y_RNA.387-201ENST00000383918 102 ntBASIC-1.11□□□□□ -2.59
SGCEO43556 Y_RNA.445-201ENST00000384168 102 ntBASIC-1.11□□□□□ -2.59
SGCEO43556 RNU6-662P-201ENST00000384253 104 ntBASIC-1.11□□□□□ -2.59
SGCEO43556 Y_RNA.572-201ENST00000384757 98 ntBASIC-1.11□□□□□ -2.59
SGCEO43556 MIR147A-201ENST00000385079 72 ntBASIC-1.11□□□□□ -2.59
SGCEO43556 SNORA49-201ENST00000386157 136 ntBASIC-1.11□□□□□ -2.59
SGCEO43556 SNORD63B-201ENST00000411005 70 ntBASIC-1.11□□□□□ -2.59
SGCEO43556 AL357793.1-201ENST00000448412 401 ntTSL 5 BASIC-1.11□□□□□ -2.59
SGCEO43556 RNU7-113P-201ENST00000459273 62 ntBASIC-1.11□□□□□ -2.59
SGCEO43556 Y_RNA.661-201ENST00000516003 99 ntBASIC-1.11□□□□□ -2.59
SGCEO43556 MIR4500-201ENST00000579472 76 ntBASIC-1.11□□□□□ -2.59
SGCEO43556 MTND4LP32-201ENST00000636111 270 ntBASIC-1.11□□□□□ -2.59
SGCEO43556 RNU6-623P-201ENST00000363143 105 ntBASIC-1.12□□□□□ -2.59
SGCEO43556 Y_RNA.105-201ENST00000363182 111 ntBASIC-1.12□□□□□ -2.59
SGCEO43556 Y_RNA.217-201ENST00000364214 105 ntBASIC-1.12□□□□□ -2.59
SGCEO43556 Y_RNA.252-201ENST00000364556 101 ntBASIC-1.12□□□□□ -2.59
SGCEO43556 Y_RNA.303-201ENST00000364998 94 ntBASIC-1.12□□□□□ -2.59
SGCEO43556 Y_RNA.562-201ENST00000384695 113 ntBASIC-1.12□□□□□ -2.59
SGCEO43556 HLA-S-202ENST00000425174 53 ntBASIC-1.12□□□□□ -2.59
SGCEO43556 Y_RNA.641-201ENST00000459414 105 ntBASIC-1.12□□□□□ -2.59
SGCEO43556 RNU4ATAC4P-201ENST00000516307 126 ntBASIC-1.12□□□□□ -2.59
SGCEO43556 SCARNA15-202ENST00000516881 127 ntBASIC-1.12□□□□□ -2.59
SGCEO43556 Y_RNA.160-201ENST00000363677 92 ntBASIC-1.13□□□□□ -2.59
SGCEO43556 RNU6-1082P-201ENST00000364574 107 ntBASIC-1.13□□□□□ -2.59
SGCEO43556 RNU6-326P-201ENST00000365480 107 ntBASIC-1.13□□□□□ -2.59
SGCEO43556 RNU6-1215P-201ENST00000384441 102 ntBASIC-1.13□□□□□ -2.59
SGCEO43556 SNORD115-46-201ENST00000390982 71 ntBASIC-1.13□□□□□ -2.59
SGCEO43556 RNU6-1228P-201ENST00000391014 107 ntBASIC-1.13□□□□□ -2.59
SGCEO43556 SNORA79-201ENST00000408376 140 ntBASIC-1.13□□□□□ -2.59
SGCEO43556 SNORA40.17-201ENST00000517256 115 ntBASIC-1.13□□□□□ -2.59
SGCEO43556 IGHVIII-67-2-201ENST00000519849 88 ntBASIC-1.13□□□□□ -2.59
SGCEO43556 AC006504.6-201ENST00000590142 199 ntBASIC-1.13□□□□□ -2.59
SGCEO43556 AC080013.6-201ENST00000606185 215 ntBASIC-1.13□□□□□ -2.59
SGCEO43556 MIR6129-201ENST00000616087 109 ntBASIC-1.13□□□□□ -2.59
SGCEO43556 HOTAIRM1_4.1-201ENST00000617934 102 ntBASIC-1.13□□□□□ -2.59
SGCEO43556 SNORD115-25-201ENST00000362619 82 ntBASIC-1.14□□□□□ -2.59
SGCEO43556 Y_RNA.120-201ENST00000363304 110 ntBASIC-1.14□□□□□ -2.59
SGCEO43556 Y_RNA.187-201ENST00000363918 113 ntBASIC-1.14□□□□□ -2.59
SGCEO43556 RNU6-290P-201ENST00000365212 101 ntBASIC-1.14□□□□□ -2.59
SGCEO43556 RNU6-1321P-201ENST00000390905 107 ntBASIC-1.14□□□□□ -2.59
SGCEO43556 MIR2113-201ENST00000459007 91 ntBASIC-1.14□□□□□ -2.59
SGCEO43556 Y_RNA.718-201ENST00000517110 102 ntBASIC-1.14□□□□□ -2.59
SGCEO43556 MIR548AE2-201ENST00000583456 67 ntBASIC-1.14□□□□□ -2.59
SGCEO43556 AC084782.3-201ENST00000612282 578 ntBASIC-1.14□□□□□ -2.59
SGCEO43556 AC104985.2-201ENST00000620598 500 ntBASIC-1.14□□□□□ -2.59
SGCEO43556 Y_RNA.52-201ENST00000362760 96 ntBASIC-1.15□□□□□ -2.59
SGCEO43556 RNU6-170P-201ENST00000362832 104 ntBASIC-1.15□□□□□ -2.59
SGCEO43556 Y_RNA.183-201ENST00000363882 113 ntBASIC-1.15□□□□□ -2.59
SGCEO43556 MT-TT-201ENST00000387460 66 ntBASIC-1.15□□□□□ -2.59
SGCEO43556 Y_RNA.581-201ENST00000391017 97 ntBASIC-1.15□□□□□ -2.59
SGCEO43556 AL606845.1-201ENST00000404881 255 ntBASIC-1.15□□□□□ -2.59
SGCEO43556 RNU6-158P-201ENST00000517104 100 ntBASIC-1.15□□□□□ -2.59
SGCEO43556 AC007012.1-201ENST00000567192 175 ntBASIC-1.15□□□□□ -2.59
SGCEO43556 MIR5704-201ENST00000584029 77 ntBASIC-1.15□□□□□ -2.59
SGCEO43556 AC092794.1-201ENST00000612734 582 ntBASIC-1.15□□□□□ -2.59
SGCEO43556 U4.1-201ENST00000620349 87 ntBASIC-1.15□□□□□ -2.59
SGCEO43556 Y_RNA.80-201ENST00000362996 102 ntBASIC-1.16□□□□□ -2.6
SGCEO43556 Y_RNA.181-201ENST00000363872 101 ntBASIC-1.16□□□□□ -2.6
SGCEO43556 RNU6-973P-201ENST00000364690 107 ntBASIC-1.16□□□□□ -2.6
SGCEO43556 SNORA51.5-201ENST00000384126 131 ntBASIC-1.16□□□□□ -2.6
SGCEO43556 Y_RNA.485-201ENST00000384395 102 ntBASIC-1.16□□□□□ -2.6
SGCEO43556 SNORD116-29-201ENST00000384516 83 ntBASIC-1.16□□□□□ -2.6
SGCEO43556 MIR652-201ENST00000385278 98 ntBASIC-1.16□□□□□ -2.6
SGCEO43556 RNA5SP266-201ENST00000410273 108 ntBASIC-1.16□□□□□ -2.6
SGCEO43556 AC093783.1-201ENST00000612976 329 ntBASIC-1.16□□□□□ -2.6
SGCEO43556 MIR8068-201ENST00000618032 68 ntBASIC-1.16□□□□□ -2.6
SGCEO43556 AC112487.2-201ENST00000637950 304 ntBASIC-1.16□□□□□ -2.6
SGCEO43556 Y_RNA.326-201ENST00000365176 113 ntBASIC-1.17□□□□□ -2.6
SGCEO43556 Y_RNA.384-201ENST00000383909 102 ntBASIC-1.17□□□□□ -2.6
SGCEO43556 Y_RNA.394-201ENST00000383942 103 ntBASIC-1.17□□□□□ -2.6
SGCEO43556 RNY1P6-201ENST00000384193 109 ntBASIC-1.17□□□□□ -2.6
SGCEO43556 Y_RNA.785-201ENST00000384290 109 ntBASIC-1.17□□□□□ -2.6
SGCEO43556 Y_RNA.497-201ENST00000384447 98 ntBASIC-1.17□□□□□ -2.6
SGCEO43556 MIR616-201ENST00000385293 97 ntBASIC-1.17□□□□□ -2.6
SGCEO43556 AC079760.1-201ENST00000456952 202 ntTSL 3 BASIC-1.17□□□□□ -2.6
SGCEO43556 RNU7-48P-201ENST00000458875 63 ntBASIC-1.17□□□□□ -2.6
SGCEO43556 MIR1270-201ENST00000459320 83 ntBASIC-1.17□□□□□ -2.6
SGCEO43556 RNA5SP180-201ENST00000516181 101 ntBASIC-1.17□□□□□ -2.6
SGCEO43556 MIR409-201ENST00000362237 79 ntBASIC-1.18□□□□□ -2.6
SGCEO43556 SNORA63.7-201ENST00000365579 123 ntBASIC-1.18□□□□□ -2.6
SGCEO43556 Y_RNA.442-201ENST00000384131 102 ntBASIC-1.18□□□□□ -2.6
SGCEO43556 RNU6-1250P-201ENST00000391218 107 ntBASIC-1.18□□□□□ -2.6
Retrieved 100 of 98,524 protein–RNA pairs in 175.2 ms