Protein–RNA interactions for Protein: O15516

CLOCK, Circadian locomoter output cycles protein kaput, humanhuman

Predictions only

Length 846 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLOCKO15516 Y_RNA.322-201ENST00000365151 102 ntBASIC-0.59□□□□□ -2.5
CLOCKO15516 Y_RNA.323-201ENST00000365157 109 ntBASIC-0.59□□□□□ -2.5
CLOCKO15516 RNU6-480P-201ENST00000384332 107 ntBASIC-0.59□□□□□ -2.5
CLOCKO15516 AC113618.1-201ENST00000416747 285 ntBASIC-0.59□□□□□ -2.5
CLOCKO15516 Y_RNA.650-201ENST00000459002 102 ntBASIC-0.59□□□□□ -2.5
CLOCKO15516 Y_RNA.777-201ENST00000516982 102 ntBASIC-0.59□□□□□ -2.5
CLOCKO15516 MIR548AE2-201ENST00000583456 67 ntBASIC-0.59□□□□□ -2.5
CLOCKO15516 Y_RNA.771-201ENST00000598668 102 ntBASIC-0.59□□□□□ -2.5
CLOCKO15516 AC105081.1-201ENST00000617727 106 ntBASIC-0.59□□□□□ -2.5
CLOCKO15516 Y_RNA.789-201ENST00000622480 102 ntBASIC-0.59□□□□□ -2.5
CLOCKO15516 AC108866.1-201ENST00000503073 2339 ntTSL 5 BASIC-0.6□□□□□ -2.51
CLOCKO15516 Y_RNA.431-201ENST00000384086 102 ntBASIC-0.6□□□□□ -2.51
CLOCKO15516 MIR635-201ENST00000384830 98 ntBASIC-0.6□□□□□ -2.51
CLOCKO15516 MIR624-201ENST00000385217 97 ntBASIC-0.6□□□□□ -2.51
CLOCKO15516 MTND5P20-201ENST00000448677 143 ntBASIC-0.6□□□□□ -2.51
CLOCKO15516 RNU6-988P-201ENST00000519081 107 ntBASIC-0.6□□□□□ -2.51
CLOCKO15516 RNU6-651P-201ENST00000411040 105 ntBASIC-0.61□□□□□ -2.51
CLOCKO15516 MIR1270-201ENST00000459320 83 ntBASIC-0.61□□□□□ -2.51
CLOCKO15516 RNU7-188P-201ENST00000517063 64 ntBASIC-0.61□□□□□ -2.51
CLOCKO15516 AL365265.1-201ENST00000621045 234 ntBASIC-0.61□□□□□ -2.51
CLOCKO15516 RNU4-84P-201ENST00000364200 139 ntBASIC-0.62□□□□□ -2.51
CLOCKO15516 SNORA25.7-201ENST00000364375 127 ntBASIC-0.62□□□□□ -2.51
CLOCKO15516 RNU1-141P-201ENST00000364623 158 ntBASIC-0.62□□□□□ -2.51
CLOCKO15516 Y_RNA.455-201ENST00000384230 98 ntBASIC-0.62□□□□□ -2.51
CLOCKO15516 MTND5P22-201ENST00000458380 195 ntBASIC-0.62□□□□□ -2.51
CLOCKO15516 Y_RNA.702-201ENST00000516843 96 ntBASIC-0.62□□□□□ -2.51
CLOCKO15516 MIR4473-201ENST00000583731 91 ntBASIC-0.62□□□□□ -2.51
CLOCKO15516 MIR4436A-201ENST00000585278 85 ntBASIC-0.62□□□□□ -2.51
CLOCKO15516 RNU6-103P-201ENST00000363686 107 ntBASIC-0.63□□□□□ -2.51
CLOCKO15516 RNU6-1144P-201ENST00000384247 104 ntBASIC-0.63□□□□□ -2.51
CLOCKO15516 MIR519A1-201ENST00000385257 85 ntBASIC-0.63□□□□□ -2.51
CLOCKO15516 MT-TD-201ENST00000387419 68 ntBASIC-0.63□□□□□ -2.51
CLOCKO15516 RNU6-1321P-201ENST00000390905 107 ntBASIC-0.63□□□□□ -2.51
CLOCKO15516 MTND5P40-201ENST00000559945 246 ntBASIC-0.63□□□□□ -2.51
CLOCKO15516 AC113195.1-201ENST00000579952 141 ntBASIC-0.63□□□□□ -2.51
CLOCKO15516 RNU4-17P-201ENST00000365598 141 ntBASIC-0.64□□□□□ -2.51
CLOCKO15516 RNU6-1201P-201ENST00000384227 107 ntBASIC-0.64□□□□□ -2.51
CLOCKO15516 RNU6-30P-201ENST00000384561 107 ntBASIC-0.64□□□□□ -2.51
CLOCKO15516 TRAJ28-201ENST00000390509 66 ntAPPRIS P1 BASIC-0.64□□□□□ -2.51
CLOCKO15516 AL603914.1-201ENST00000401964 204 ntBASIC-0.64□□□□□ -2.51
CLOCKO15516 SNORD75.1-201ENST00000408373 60 ntBASIC-0.64□□□□□ -2.51
CLOCKO15516 RNU7-74P-201ENST00000459104 62 ntBASIC-0.64□□□□□ -2.51
CLOCKO15516 RNU7-13P-201ENST00000516413 62 ntBASIC-0.64□□□□□ -2.51
CLOCKO15516 AL442663.2-201ENST00000554385 511 ntBASIC-0.64□□□□□ -2.51
CLOCKO15516 Y_RNA.419-201ENST00000384041 102 ntBASIC-0.65□□□□□ -2.51
CLOCKO15516 RNU6-1162P-201ENST00000384443 104 ntBASIC-0.65□□□□□ -2.51
CLOCKO15516 MIR224-201ENST00000384889 81 ntBASIC-0.65□□□□□ -2.51
CLOCKO15516 MIR181B2-201ENST00000385004 89 ntBASIC-0.65□□□□□ -2.51
CLOCKO15516 Y_RNA.590-201ENST00000410140 107 ntBASIC-0.65□□□□□ -2.51
CLOCKO15516 AL121914.1-201ENST00000450188 156 ntBASIC-0.65□□□□□ -2.51
CLOCKO15516 RNU7-195P-201ENST00000458793 62 ntBASIC-0.65□□□□□ -2.51
CLOCKO15516 snoU13.19-201ENST00000459148 104 ntBASIC-0.65□□□□□ -2.51
CLOCKO15516 EBAG9-207ENST00000531677 777 ntTSL 1 (best) BASIC-0.65□□□□□ -2.51
CLOCKO15516 MIR4500-201ENST00000579472 76 ntBASIC-0.65□□□□□ -2.51
CLOCKO15516 SYCP2-202ENST00000371001 5479 ntAPPRIS P2 TSL 1 (best) BASIC-0.66□□□□□ -2.51
CLOCKO15516 Y_RNA.158-201ENST00000363651 101 ntBASIC-0.66□□□□□ -2.52
CLOCKO15516 Y_RNA.531-201ENST00000384589 121 ntBASIC-0.66□□□□□ -2.52
CLOCKO15516 MIR548I2-201ENST00000408348 149 ntBASIC-0.66□□□□□ -2.52
CLOCKO15516 AC093423.1-201ENST00000440817 142 ntBASIC-0.66□□□□□ -2.52
CLOCKO15516 Y_RNA.809-201ENST00000516058 95 ntBASIC-0.66□□□□□ -2.52
CLOCKO15516 Y_RNA.679-201ENST00000516416 91 ntBASIC-0.66□□□□□ -2.52
CLOCKO15516 RNU2-35P-201ENST00000516446 142 ntBASIC-0.66□□□□□ -2.52
CLOCKO15516 DEFB131B-201ENST00000530210 213 ntAPPRIS P1 TSL 1 (best) BASIC-0.66□□□□□ -2.52
CLOCKO15516 MIR548AG2-201ENST00000581228 64 ntBASIC-0.66□□□□□ -2.52
CLOCKO15516 MIR4282-201ENST00000583613 67 ntBASIC-0.66□□□□□ -2.52
CLOCKO15516 AC096720.1-201ENST00000604441 183 ntBASIC-0.66□□□□□ -2.52
CLOCKO15516 AC069503.3-201ENST00000618674 145 ntBASIC-0.66□□□□□ -2.52
CLOCKO15516 SNORD114-14-201ENST00000362723 75 ntBASIC-0.67□□□□□ -2.52
CLOCKO15516 SNORD114-15-201ENST00000364687 72 ntBASIC-0.67□□□□□ -2.52
CLOCKO15516 Y_RNA.416-201ENST00000384014 113 ntBASIC-0.67□□□□□ -2.52
CLOCKO15516 RNU6-474P-201ENST00000384243 107 ntBASIC-0.67□□□□□ -2.52
CLOCKO15516 MIR519E-201ENST00000385075 84 ntBASIC-0.67□□□□□ -2.52
CLOCKO15516 SNORD63B-201ENST00000411005 70 ntBASIC-0.67□□□□□ -2.52
CLOCKO15516 RNU7-48P-201ENST00000458875 63 ntBASIC-0.67□□□□□ -2.52
CLOCKO15516 RNU6-175P-201ENST00000516896 107 ntBASIC-0.67□□□□□ -2.52
CLOCKO15516 Y_RNA.371-201ENST00000365591 113 ntBASIC-0.68□□□□□ -2.52
CLOCKO15516 MIR539-201ENST00000365690 78 ntBASIC-0.68□□□□□ -2.52
CLOCKO15516 Y_RNA.448-201ENST00000384185 108 ntBASIC-0.68□□□□□ -2.52
CLOCKO15516 Y_RNA.527-201ENST00000384573 102 ntBASIC-0.68□□□□□ -2.52
CLOCKO15516 Y_RNA.562-201ENST00000384695 113 ntBASIC-0.68□□□□□ -2.52
CLOCKO15516 MIR206-201ENST00000384872 86 ntBASIC-0.68□□□□□ -2.52
CLOCKO15516 RNU6-1307P-201ENST00000391012 103 ntBASIC-0.68□□□□□ -2.52
CLOCKO15516 RNA5SP236-201ENST00000516169 116 ntBASIC-0.68□□□□□ -2.52
CLOCKO15516 Y_RNA.692-201ENST00000516627 105 ntBASIC-0.68□□□□□ -2.52
CLOCKO15516 RNA5SP66-201ENST00000517178 101 ntBASIC-0.68□□□□□ -2.52
CLOCKO15516 MIR4744-201ENST00000581563 82 ntBASIC-0.68□□□□□ -2.52
CLOCKO15516 MIR548AE1-201ENST00000583292 70 ntBASIC-0.68□□□□□ -2.52
CLOCKO15516 U2.14-201ENST00000615943 113 ntBASIC-0.68□□□□□ -2.52
CLOCKO15516 uc_338.10-201ENST00000621872 182 ntBASIC-0.68□□□□□ -2.52
CLOCKO15516 RNU6-1260P-201ENST00000362944 107 ntBASIC-0.69□□□□□ -2.52
CLOCKO15516 RNU6-524P-201ENST00000384270 107 ntBASIC-0.69□□□□□ -2.52
CLOCKO15516 RNU6-735P-201ENST00000410612 107 ntBASIC-0.69□□□□□ -2.52
CLOCKO15516 RNA5SP169-201ENST00000517268 117 ntBASIC-0.69□□□□□ -2.52
CLOCKO15516 YWHAEP2-201ENST00000580066 112 ntBASIC-0.69□□□□□ -2.52
CLOCKO15516 Y_RNA.52-201ENST00000362760 96 ntBASIC-0.7□□□□□ -2.52
CLOCKO15516 RNU6-170P-201ENST00000362832 104 ntBASIC-0.7□□□□□ -2.52
CLOCKO15516 Y_RNA.237-201ENST00000364439 102 ntBASIC-0.7□□□□□ -2.52
CLOCKO15516 Y_RNA.262-201ENST00000364641 102 ntBASIC-0.7□□□□□ -2.52
CLOCKO15516 Y_RNA.357-201ENST00000365487 109 ntBASIC-0.7□□□□□ -2.52
CLOCKO15516 RNU6-455P-201ENST00000384681 107 ntBASIC-0.7□□□□□ -2.52
Retrieved 100 of 98,524 protein–RNA pairs in 217.9 ms