Protein–RNA interactions for Protein: O15457

MSH4, MutS protein homolog 4, humanhuman

Predictions only

Length 936 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MSH4O15457 Y_RNA.644-201ENST00000459006 113 ntBASIC0.14□□□□□ -2.39
MSH4O15457 RNU7-164P-201ENST00000459221 62 ntBASIC0.14□□□□□ -2.39
MSH4O15457 MIR1270-201ENST00000459320 83 ntBASIC0.14□□□□□ -2.39
MSH4O15457 RNU5E-3P-201ENST00000515913 68 ntBASIC0.14□□□□□ -2.39
MSH4O15457 RNA5SP227-201ENST00000516184 113 ntBASIC0.14□□□□□ -2.39
MSH4O15457 Y_RNA.674-201ENST00000516362 113 ntBASIC0.14□□□□□ -2.39
MSH4O15457 RNU7-137P-201ENST00000516788 62 ntBASIC0.14□□□□□ -2.39
MSH4O15457 AC138749.4-201ENST00000563970 127 ntBASIC0.14□□□□□ -2.39
MSH4O15457 AC138907.4-201ENST00000570107 226 ntBASIC0.14□□□□□ -2.39
MSH4O15457 MIR4719-201ENST00000585233 84 ntBASIC0.14□□□□□ -2.39
MSH4O15457 AC244669.1-204ENST00000621564 178 ntBASIC0.14□□□□□ -2.39
MSH4O15457 MIR6828-201ENST00000636181 60 ntBASIC0.14□□□□□ -2.39
MSH4O15457 Y_RNA.49-201ENST00000362714 112 ntBASIC0.13□□□□□ -2.39
MSH4O15457 Y_RNA.119-201ENST00000363301 96 ntBASIC0.13□□□□□ -2.39
MSH4O15457 RNU6-1229P-201ENST00000364295 107 ntBASIC0.13□□□□□ -2.39
MSH4O15457 Y_RNA.489-201ENST00000384410 101 ntBASIC0.13□□□□□ -2.39
MSH4O15457 SNORD28-201ENST00000384706 75 ntBASIC0.13□□□□□ -2.39
MSH4O15457 RNU7-123P-201ENST00000515911 60 ntBASIC0.13□□□□□ -2.39
MSH4O15457 Y_RNA.686-201ENST00000516548 134 ntBASIC0.13□□□□□ -2.39
MSH4O15457 RNU6-388P-201ENST00000517012 105 ntBASIC0.13□□□□□ -2.39
MSH4O15457 RNU6-389P-201ENST00000517048 105 ntBASIC0.13□□□□□ -2.39
MSH4O15457 MIR101-2-201ENST00000362195 79 ntBASIC0.12□□□□□ -2.39
MSH4O15457 RNU4-58P-201ENST00000363192 141 ntBASIC0.12□□□□□ -2.39
MSH4O15457 RNU6-379P-201ENST00000363813 104 ntBASIC0.12□□□□□ -2.39
MSH4O15457 RNU6-239P-201ENST00000390990 99 ntBASIC0.12□□□□□ -2.39
MSH4O15457 MIR1295A-201ENST00000408463 79 ntBASIC0.12□□□□□ -2.39
MSH4O15457 RNU2-59P-201ENST00000410482 191 ntBASIC0.12□□□□□ -2.39
MSH4O15457 Y_RNA.651-201ENST00000459380 103 ntBASIC0.12□□□□□ -2.39
MSH4O15457 RNU6-861P-201ENST00000516745 106 ntBASIC0.12□□□□□ -2.39
MSH4O15457 RNU6-1271P-201ENST00000517049 105 ntBASIC0.12□□□□□ -2.39
MSH4O15457 RNA5SP47-201ENST00000517230 109 ntBASIC0.12□□□□□ -2.39
MSH4O15457 AP002392.1-201ENST00000537692 208 ntBASIC0.12□□□□□ -2.39
MSH4O15457 MIR4752-201ENST00000579672 72 ntBASIC0.12□□□□□ -2.39
MSH4O15457 AC011603.4-201ENST00000611325 277 ntBASIC0.12□□□□□ -2.39
MSH4O15457 MIR6755-201ENST00000619993 66 ntBASIC0.12□□□□□ -2.39
MSH4O15457 Y_RNA.188-201ENST00000363952 111 ntBASIC0.11□□□□□ -2.39
MSH4O15457 RNU4-84P-201ENST00000364200 139 ntBASIC0.11□□□□□ -2.39
MSH4O15457 SNORD18B-201ENST00000365659 72 ntBASIC0.11□□□□□ -2.39
MSH4O15457 MTATP6P21-201ENST00000440681 189 ntBASIC0.11□□□□□ -2.39
MSH4O15457 RNU6-135P-201ENST00000516769 101 ntBASIC0.11□□□□□ -2.39
MSH4O15457 SCARNA16.5-201ENST00000517114 183 ntBASIC0.11□□□□□ -2.39
MSH4O15457 AC069113.3-201ENST00000521019 150 ntBASIC0.11□□□□□ -2.39
MSH4O15457 MIR4315-1-201ENST00000636800 73 ntBASIC0.11□□□□□ -2.39
MSH4O15457 MIR4315-2-201ENST00000640925 73 ntBASIC0.11□□□□□ -2.39
MSH4O15457 RNA5SP257-201ENST00000363023 116 ntBASIC0.1□□□□□ -2.39
MSH4O15457 RNU6-1099P-201ENST00000363533 107 ntBASIC0.1□□□□□ -2.39
MSH4O15457 RNY1P2-201ENST00000364820 117 ntBASIC0.1□□□□□ -2.39
MSH4O15457 RNU6-1104P-201ENST00000384723 104 ntBASIC0.1□□□□□ -2.39
MSH4O15457 RNU6-1321P-201ENST00000390905 107 ntBASIC0.1□□□□□ -2.39
MSH4O15457 Y_RNA.584-201ENST00000391090 114 ntBASIC0.1□□□□□ -2.39
MSH4O15457 AC074198.2-201ENST00000508153 258 ntBASIC0.1□□□□□ -2.39
MSH4O15457 RNU7-129P-201ENST00000516128 62 ntBASIC0.1□□□□□ -2.39
MSH4O15457 Y_RNA.690-201ENST00000516603 95 ntBASIC0.1□□□□□ -2.39
MSH4O15457 RNU7-121P-201ENST00000516604 62 ntBASIC0.1□□□□□ -2.39
MSH4O15457 MIR4639-201ENST00000584938 69 ntBASIC0.1□□□□□ -2.39
MSH4O15457 AC108081.1-201ENST00000604358 221 ntBASIC0.1□□□□□ -2.39
MSH4O15457 AC072026.1-201ENST00000605023 201 ntBASIC0.1□□□□□ -2.39
MSH4O15457 TUG1_4.1-201ENST00000619464 181 ntBASIC0.1□□□□□ -2.39
MSH4O15457 SNORD114-10-201ENST00000363409 72 ntBASIC0.09□□□□□ -2.4
MSH4O15457 SNORD115-24-201ENST00000363528 82 ntBASIC0.09□□□□□ -2.4
MSH4O15457 Y_RNA.251-201ENST00000364551 99 ntBASIC0.09□□□□□ -2.4
MSH4O15457 Y_RNA.298-201ENST00000364960 107 ntBASIC0.09□□□□□ -2.4
MSH4O15457 PCNPP3-201ENST00000393579 471 ntBASIC0.09□□□□□ -2.4
MSH4O15457 AC108059.2-201ENST00000434626 151 ntBASIC0.09□□□□□ -2.4
MSH4O15457 RNU6-138P-201ENST00000515952 107 ntBASIC0.09□□□□□ -2.4
MSH4O15457 AC112693.2-201ENST00000556538 232 ntBASIC0.09□□□□□ -2.4
MSH4O15457 MIR3646-201ENST00000578301 84 ntBASIC0.09□□□□□ -2.4
MSH4O15457 MIR4500-201ENST00000579472 76 ntBASIC0.09□□□□□ -2.4
MSH4O15457 MIR4768-201ENST00000585270 74 ntBASIC0.09□□□□□ -2.4
MSH4O15457 DNAJC19P2-201ENST00000593340 302 ntBASIC0.09□□□□□ -2.4
MSH4O15457 AC091304.10-201ENST00000641554 121 ntBASIC0.09□□□□□ -2.4
MSH4O15457 RNU6-1126P-201ENST00000384002 107 ntBASIC0.08□□□□□ -2.4
MSH4O15457 Y_RNA.448-201ENST00000384185 108 ntBASIC0.08□□□□□ -2.4
MSH4O15457 MIR206-201ENST00000384872 86 ntBASIC0.08□□□□□ -2.4
MSH4O15457 MIRLET7F2-201ENST00000385277 83 ntBASIC0.08□□□□□ -2.4
MSH4O15457 RNU6-1307P-201ENST00000391012 103 ntBASIC0.08□□□□□ -2.4
MSH4O15457 RNU6ATAC23P-201ENST00000408448 123 ntBASIC0.08□□□□□ -2.4
MSH4O15457 RNU4-69P-201ENST00000410677 143 ntBASIC0.08□□□□□ -2.4
MSH4O15457 RNU6-1232P-201ENST00000516299 86 ntBASIC0.08□□□□□ -2.4
MSH4O15457 RNU6-682P-201ENST00000363843 106 ntBASIC0.07□□□□□ -2.4
MSH4O15457 Y_RNA.240-201ENST00000364469 95 ntBASIC0.07□□□□□ -2.4
MSH4O15457 RNU4-11P-201ENST00000365287 132 ntBASIC0.07□□□□□ -2.4
MSH4O15457 Y_RNA.374-201ENST00000365606 101 ntBASIC0.07□□□□□ -2.4
MSH4O15457 RNU6-460P-201ENST00000391158 108 ntBASIC0.07□□□□□ -2.4
MSH4O15457 AL603914.1-201ENST00000401964 204 ntBASIC0.07□□□□□ -2.4
MSH4O15457 BX276092.1-201ENST00000427368 251 ntBASIC0.07□□□□□ -2.4
MSH4O15457 RNU6-848P-201ENST00000515948 107 ntBASIC0.07□□□□□ -2.4
MSH4O15457 Y_RNA.662-201ENST00000516028 97 ntBASIC0.07□□□□□ -2.4
MSH4O15457 RNU6-617P-201ENST00000516147 107 ntBASIC0.07□□□□□ -2.4
MSH4O15457 RNU6-473P-201ENST00000516164 107 ntBASIC0.07□□□□□ -2.4
MSH4O15457 RNU6-1049P-201ENST00000516414 107 ntBASIC0.07□□□□□ -2.4
MSH4O15457 RNY4P20-201ENST00000516678 93 ntBASIC0.07□□□□□ -2.4
MSH4O15457 AC098479.1-201ENST00000609225 154 ntBASIC0.07□□□□□ -2.4
MSH4O15457 MIR499B-201ENST00000636498 73 ntBASIC0.07□□□□□ -2.4
MSH4O15457 MIR371B-201ENST00000638082 66 ntBASIC0.07□□□□□ -2.4
MSH4O15457 Y_RNA.56-201ENST00000362798 112 ntBASIC0.06□□□□□ -2.4
MSH4O15457 Y_RNA.272-201ENST00000364696 102 ntBASIC0.06□□□□□ -2.4
MSH4O15457 RNU6-200P-201ENST00000364743 107 ntBASIC0.06□□□□□ -2.4
MSH4O15457 RNU6-1318P-201ENST00000365389 103 ntBASIC0.06□□□□□ -2.4
MSH4O15457 MIR643-201ENST00000385267 97 ntBASIC0.06□□□□□ -2.4
Retrieved 100 of 98,524 protein–RNA pairs in 23.2 ms