Protein–RNA interactions for Protein: O15266

SHOX, Short stature homeobox protein, humanhuman

Predictions only

Length 292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHOXO15266 RNU6-1053P-201ENST00000515930 101 ntBASIC1.63□□□□□ -2.15
SHOXO15266 MIR4500-201ENST00000579472 76 ntBASIC1.63□□□□□ -2.15
SHOXO15266 MIR4285-201ENST00000581001 85 ntBASIC1.63□□□□□ -2.15
SHOXO15266 MIR219B-201ENST00000637023 88 ntBASIC1.63□□□□□ -2.15
SHOXO15266 ZNF654-201ENST00000309495 4957 ntAPPRIS P2 TSL 1 (best) BASIC1.62□□□□□ -2.15
SHOXO15266 Y_RNA.118-201ENST00000363300 101 ntBASIC1.62□□□□□ -2.15
SHOXO15266 SNORD58A-201ENST00000383875 65 ntBASIC1.62□□□□□ -2.15
SHOXO15266 RNU6-571P-201ENST00000384128 107 ntBASIC1.62□□□□□ -2.15
SHOXO15266 TRAJ1-201ENST00000390536 62 ntAPPRIS P1 BASIC1.62□□□□□ -2.15
SHOXO15266 SNORA75.2-201ENST00000391138 150 ntBASIC1.62□□□□□ -2.15
SHOXO15266 SNORA75.3-201ENST00000391231 150 ntBASIC1.62□□□□□ -2.15
SHOXO15266 uc_338.6-201ENST00000613544 171 ntBASIC1.62□□□□□ -2.15
SHOXO15266 Y_RNA.783-201ENST00000613546 102 ntBASIC1.62□□□□□ -2.15
SHOXO15266 AC023934.1-201ENST00000574529 2389 ntBASIC1.61□□□□□ -2.15
SHOXO15266 Y_RNA.4-201ENST00000362333 112 ntBASIC1.61□□□□□ -2.15
SHOXO15266 SNORD73B-201ENST00000364394 72 ntBASIC1.61□□□□□ -2.15
SHOXO15266 SNORD48-201ENST00000364953 64 ntBASIC1.61□□□□□ -2.15
SHOXO15266 RNU1-36P-201ENST00000365130 165 ntBASIC1.61□□□□□ -2.15
SHOXO15266 RNU6ATAC2P-201ENST00000387943 126 ntBASIC1.61□□□□□ -2.15
SHOXO15266 RNU6ATAC38P-201ENST00000408119 126 ntBASIC1.61□□□□□ -2.15
SHOXO15266 RNU6ATAC6P-201ENST00000408132 126 ntBASIC1.61□□□□□ -2.15
SHOXO15266 MIR1287-201ENST00000408492 90 ntBASIC1.61□□□□□ -2.15
SHOXO15266 RNU7-90P-201ENST00000459216 62 ntBASIC1.61□□□□□ -2.15
SHOXO15266 AC106800.4-201ENST00000614905 153 ntBASIC1.61□□□□□ -2.15
SHOXO15266 RNU6-934P-201ENST00000365154 107 ntBASIC1.6□□□□□ -2.15
SHOXO15266 SNORA72.6-201ENST00000384520 129 ntBASIC1.6□□□□□ -2.15
SHOXO15266 SNORA64-201ENST00000384674 134 ntBASIC1.6□□□□□ -2.15
SHOXO15266 MIR450A2-201ENST00000385022 100 ntBASIC1.6□□□□□ -2.15
SHOXO15266 RNU6-910P-201ENST00000390844 107 ntBASIC1.6□□□□□ -2.15
SHOXO15266 SNRPGP12-201ENST00000449481 213 ntBASIC1.6□□□□□ -2.15
SHOXO15266 RNU7-185P-201ENST00000459215 60 ntBASIC1.6□□□□□ -2.15
SHOXO15266 RNU7-21P-201ENST00000459430 62 ntBASIC1.6□□□□□ -2.15
SHOXO15266 RNU6-1194P-201ENST00000516208 104 ntBASIC1.6□□□□□ -2.15
SHOXO15266 AC036111.3-201ENST00000526389 112 ntBASIC1.6□□□□□ -2.15
SHOXO15266 MIR7111-201ENST00000619751 72 ntBASIC1.6□□□□□ -2.15
SHOXO15266 ZNF355P-201ENST00000427301 3216 ntBASIC1.59□□□□□ -2.15
SHOXO15266 RNU6-403P-201ENST00000363163 104 ntBASIC1.59□□□□□ -2.15
SHOXO15266 RNA5SP363-201ENST00000365072 115 ntBASIC1.59□□□□□ -2.15
SHOXO15266 SNORD116-22-201ENST00000384430 92 ntBASIC1.59□□□□□ -2.15
SHOXO15266 RNU4-83P-201ENST00000410863 133 ntBASIC1.59□□□□□ -2.15
SHOXO15266 RNU1-98P-201ENST00000458992 160 ntBASIC1.59□□□□□ -2.15
SHOXO15266 SNORA70.22-201ENST00000517160 124 ntBASIC1.59□□□□□ -2.15
SHOXO15266 MIR4491-201ENST00000581087 68 ntBASIC1.59□□□□□ -2.15
SHOXO15266 Y_RNA.226-201ENST00000364337 114 ntBASIC1.58□□□□□ -2.16
SHOXO15266 MIR764-201ENST00000390811 85 ntBASIC1.58□□□□□ -2.16
SHOXO15266 SNORA26.2-201ENST00000390922 122 ntBASIC1.58□□□□□ -2.16
SHOXO15266 SNORD12-201ENST00000391002 90 ntBASIC1.58□□□□□ -2.16
SHOXO15266 RNU6-994P-201ENST00000410507 111 ntBASIC1.58□□□□□ -2.16
SHOXO15266 SNORD79.1-201ENST00000516069 84 ntBASIC1.58□□□□□ -2.16
SHOXO15266 ZGRF1-202ENST00000309071 3347 ntTSL 1 (best) BASIC1.58□□□□□ -2.16
SHOXO15266 Y_RNA.57-201ENST00000362806 113 ntBASIC1.57□□□□□ -2.16
SHOXO15266 Y_RNA.363-201ENST00000365529 113 ntBASIC1.57□□□□□ -2.16
SHOXO15266 SNORD83.1-201ENST00000411362 77 ntBASIC1.57□□□□□ -2.16
SHOXO15266 MIR5089-201ENST00000580047 84 ntBASIC1.57□□□□□ -2.16
SHOXO15266 5S_rRNA.15-201ENST00000611169 127 ntBASIC1.57□□□□□ -2.16
SHOXO15266 MIR8066-201ENST00000617280 78 ntBASIC1.57□□□□□ -2.16
SHOXO15266 C16orf97-206ENST00000622950 415 ntTSL 2 BASIC1.57□□□□□ -2.16
SHOXO15266 RNU6-820P-201ENST00000384273 107 ntBASIC1.56□□□□□ -2.16
SHOXO15266 Y_RNA.588-201ENST00000391254 102 ntBASIC1.56□□□□□ -2.16
SHOXO15266 RNU6-850P-201ENST00000516934 103 ntBASIC1.56□□□□□ -2.16
SHOXO15266 AC023827.1-201ENST00000569247 97 ntBASIC1.56□□□□□ -2.16
SHOXO15266 MIR4771-2-201ENST00000577758 74 ntBASIC1.56□□□□□ -2.16
SHOXO15266 MIR4771-1-201ENST00000582617 74 ntBASIC1.56□□□□□ -2.16
SHOXO15266 RNU7-10P-201ENST00000607194 63 ntBASIC1.56□□□□□ -2.16
SHOXO15266 MIR101-2-201ENST00000362195 79 ntBASIC1.55□□□□□ -2.16
SHOXO15266 MIR222-201ENST00000384992 110 ntBASIC1.55□□□□□ -2.16
SHOXO15266 MIR181B2-201ENST00000385004 89 ntBASIC1.55□□□□□ -2.16
SHOXO15266 BX276092.1-201ENST00000427368 251 ntBASIC1.55□□□□□ -2.16
SHOXO15266 TTTY16-201ENST00000437686 192 ntTSL 1 (best) BASIC1.55□□□□□ -2.16
SHOXO15266 AC067940.1-201ENST00000458411 300 ntBASIC1.55□□□□□ -2.16
SHOXO15266 RNU6-531P-201ENST00000516694 104 ntBASIC1.55□□□□□ -2.16
SHOXO15266 RNU6-765P-201ENST00000516916 99 ntBASIC1.55□□□□□ -2.16
SHOXO15266 RNU6-762P-201ENST00000517107 102 ntBASIC1.55□□□□□ -2.16
SHOXO15266 AC036222.2-201ENST00000579033 333 ntTSL 3 BASIC1.55□□□□□ -2.16
SHOXO15266 Y_RNA.17-201ENST00000362433 111 ntBASIC1.54□□□□□ -2.16
SHOXO15266 Y_RNA.190-201ENST00000363964 101 ntBASIC1.54□□□□□ -2.16
SHOXO15266 MIR125B2-201ENST00000385128 89 ntBASIC1.54□□□□□ -2.16
SHOXO15266 RNU6ATAC8P-201ENST00000408460 126 ntBASIC1.54□□□□□ -2.16
SHOXO15266 RPS26P5-201ENST00000418544 335 ntBASIC1.54□□□□□ -2.16
SHOXO15266 snoU13.21-201ENST00000459368 105 ntBASIC1.54□□□□□ -2.16
SHOXO15266 SNORA25.16-201ENST00000516741 121 ntBASIC1.54□□□□□ -2.16
SHOXO15266 AL513043.2-201ENST00000573941 143 ntBASIC1.54□□□□□ -2.16
SHOXO15266 TP73-AS1.1-201ENST00000611447 161 ntBASIC1.54□□□□□ -2.16
SHOXO15266 MIR6082-201ENST00000613604 109 ntBASIC1.54□□□□□ -2.16
SHOXO15266 IGLL4P-201ENST00000614590 133 ntBASIC1.54□□□□□ -2.16
SHOXO15266 HIF1A-204ENST00000539097 3956 ntTSL 1 (best) BASIC1.53□□□□□ -2.16
SHOXO15266 ANGPTL3-201ENST00000371129 2805 ntAPPRIS P1 TSL 1 (best) BASIC1.53□□□□□ -2.16
SHOXO15266 Y_RNA.508-201ENST00000384502 114 ntBASIC1.53□□□□□ -2.16
SHOXO15266 RNY4P29-201ENST00000410801 97 ntBASIC1.53□□□□□ -2.16
SHOXO15266 RN7SKP12-201ENST00000516275 143 ntBASIC1.53□□□□□ -2.16
SHOXO15266 RNU6-295P-201ENST00000516901 104 ntBASIC1.53□□□□□ -2.16
SHOXO15266 IGLVVI-22-1-201ENST00000521183 211 ntBASIC1.53□□□□□ -2.16
SHOXO15266 MIR4781-201ENST00000585250 76 ntBASIC1.53□□□□□ -2.16
SHOXO15266 AC034238.1-213ENST00000611148 150 ntTSL 5 BASIC1.53□□□□□ -2.16
SHOXO15266 snoMBII-202.2-201ENST00000517263 86 ntBASIC1.52□□□□□ -2.17
SHOXO15266 MIR4498-201ENST00000577599 66 ntBASIC1.52□□□□□ -2.17
SHOXO15266 MIR548H5-201ENST00000580314 60 ntBASIC1.52□□□□□ -2.17
SHOXO15266 ABCA5-201ENST00000392676 8220 ntAPPRIS P1 TSL 1 (best) BASIC1.52□□□□□ -2.17
SHOXO15266 RNY1P1-201ENST00000364372 112 ntBASIC1.51□□□□□ -2.17
SHOXO15266 SNORA16.1-201ENST00000364597 132 ntBASIC1.51□□□□□ -2.17
Retrieved 100 of 98,524 protein–RNA pairs in 117.9 ms