Protein–RNA interactions for Protein: O00716

E2F3, Transcription factor E2F3, humanhuman

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
E2F3O00716 RNU6-469P-201ENST00000516253 101 ntBASIC0.42□□□□□ -2.34
E2F3O00716 SNORA25.16-201ENST00000516741 121 ntBASIC0.42□□□□□ -2.34
E2F3O00716 MIR3678-201ENST00000578455 94 ntBASIC0.42□□□□□ -2.34
E2F3O00716 MIR3144-201ENST00000579460 79 ntBASIC0.42□□□□□ -2.34
E2F3O00716 AC092634.7-201ENST00000621022 103 ntBASIC0.42□□□□□ -2.34
E2F3O00716 Y_RNA.298-201ENST00000364960 107 ntBASIC0.41□□□□□ -2.34
E2F3O00716 Y_RNA.299-201ENST00000364973 94 ntBASIC0.41□□□□□ -2.34
E2F3O00716 Y_RNA.692-201ENST00000516627 105 ntBASIC0.41□□□□□ -2.34
E2F3O00716 Y_RNA.697-201ENST00000516776 113 ntBASIC0.41□□□□□ -2.34
E2F3O00716 RNU6-794P-201ENST00000517261 64 ntBASIC0.41□□□□□ -2.34
E2F3O00716 IGHVII-40-1-201ENST00000517316 58 ntBASIC0.41□□□□□ -2.34
E2F3O00716 AL137067.1-201ENST00000615933 120 ntBASIC0.41□□□□□ -2.34
E2F3O00716 FTX_2.1-201ENST00000618816 94 ntBASIC0.41□□□□□ -2.34
E2F3O00716 CEP290-203ENST00000547691 5968 ntTSL 1 (best) BASIC0.41□□□□□ -2.34
E2F3O00716 RNA5SP133-201ENST00000363368 119 ntBASIC0.4□□□□□ -2.35
E2F3O00716 RNU6-915P-201ENST00000364943 103 ntBASIC0.4□□□□□ -2.35
E2F3O00716 RNU6-886P-201ENST00000384319 105 ntBASIC0.4□□□□□ -2.35
E2F3O00716 RNU4-69P-201ENST00000410677 143 ntBASIC0.4□□□□□ -2.35
E2F3O00716 AC096949.1-201ENST00000412047 152 ntBASIC0.4□□□□□ -2.35
E2F3O00716 SNORD67.1-201ENST00000516618 108 ntBASIC0.4□□□□□ -2.35
E2F3O00716 RNU6-765P-201ENST00000516916 99 ntBASIC0.4□□□□□ -2.35
E2F3O00716 AP003327.1-201ENST00000529684 127 ntBASIC0.4□□□□□ -2.35
E2F3O00716 MIR548X2-201ENST00000579776 100 ntBASIC0.4□□□□□ -2.35
E2F3O00716 AC105081.1-201ENST00000617727 106 ntBASIC0.4□□□□□ -2.35
E2F3O00716 Y_RNA.68-201ENST00000362881 102 ntBASIC0.39□□□□□ -2.35
E2F3O00716 Y_RNA.398-201ENST00000383952 99 ntBASIC0.39□□□□□ -2.35
E2F3O00716 RNU6-535P-201ENST00000384722 107 ntBASIC0.39□□□□□ -2.35
E2F3O00716 MIR644A-201ENST00000385262 94 ntBASIC0.39□□□□□ -2.35
E2F3O00716 RNU6-531P-201ENST00000516694 104 ntBASIC0.39□□□□□ -2.35
E2F3O00716 uc_338.16-201ENST00000621804 95 ntBASIC0.39□□□□□ -2.35
E2F3O00716 U6.109-201ENST00000636749 87 ntBASIC0.39□□□□□ -2.35
E2F3O00716 RNU4-58P-201ENST00000363192 141 ntBASIC0.38□□□□□ -2.35
E2F3O00716 SNORD114-10-201ENST00000363409 72 ntBASIC0.38□□□□□ -2.35
E2F3O00716 Y_RNA.536-201ENST00000384621 113 ntBASIC0.38□□□□□ -2.35
E2F3O00716 SNORD77B-201ENST00000391112 67 ntBASIC0.38□□□□□ -2.35
E2F3O00716 RNU7-197P-201ENST00000458836 62 ntBASIC0.38□□□□□ -2.35
E2F3O00716 RNU6-1194P-201ENST00000516208 104 ntBASIC0.38□□□□□ -2.35
E2F3O00716 RNY4P20-201ENST00000516678 93 ntBASIC0.38□□□□□ -2.35
E2F3O00716 RNU7-137P-201ENST00000516788 62 ntBASIC0.38□□□□□ -2.35
E2F3O00716 AP001328.1-201ENST00000528550 176 ntBASIC0.38□□□□□ -2.35
E2F3O00716 MTND5P34-201ENST00000568888 325 ntBASIC0.38□□□□□ -2.35
E2F3O00716 MIR3121-201ENST00000579680 77 ntBASIC0.38□□□□□ -2.35
E2F3O00716 AC108081.1-201ENST00000604358 221 ntBASIC0.38□□□□□ -2.35
E2F3O00716 AC098479.1-201ENST00000609225 154 ntBASIC0.38□□□□□ -2.35
E2F3O00716 MIR101-2-201ENST00000362195 79 ntBASIC0.37□□□□□ -2.35
E2F3O00716 Y_RNA.174-201ENST00000363781 105 ntBASIC0.37□□□□□ -2.35
E2F3O00716 Y_RNA.215-201ENST00000364204 112 ntBASIC0.37□□□□□ -2.35
E2F3O00716 Y_RNA.400-201ENST00000383963 111 ntBASIC0.37□□□□□ -2.35
E2F3O00716 Y_RNA.567-201ENST00000384736 106 ntBASIC0.37□□□□□ -2.35
E2F3O00716 AC108059.2-201ENST00000434626 151 ntBASIC0.37□□□□□ -2.35
E2F3O00716 LINC00345-201ENST00000443679 285 ntTSL 5 BASIC0.37□□□□□ -2.35
E2F3O00716 SNORA68.3-201ENST00000515906 83 ntBASIC0.37□□□□□ -2.35
E2F3O00716 SNORA31.14-201ENST00000516728 116 ntBASIC0.37□□□□□ -2.35
E2F3O00716 RNA5SP94-201ENST00000516917 108 ntBASIC0.37□□□□□ -2.35
E2F3O00716 MIR3671-201ENST00000580455 88 ntBASIC0.37□□□□□ -2.35
E2F3O00716 AL359881.1-201ENST00000602916 267 ntBASIC0.37□□□□□ -2.35
E2F3O00716 FAM13A-AS1_1.1-201ENST00000612555 119 ntBASIC0.37□□□□□ -2.35
E2F3O00716 NEAT1_2.1-201ENST00000620525 105 ntBASIC0.37□□□□□ -2.35
E2F3O00716 Y_RNA.119-201ENST00000363301 96 ntBASIC0.36□□□□□ -2.35
E2F3O00716 RNA5SP62-201ENST00000363457 110 ntBASIC0.36□□□□□ -2.35
E2F3O00716 Y_RNA.178-201ENST00000363832 102 ntBASIC0.36□□□□□ -2.35
E2F3O00716 RNA5SP517-201ENST00000364724 117 ntBASIC0.36□□□□□ -2.35
E2F3O00716 PCNPP3-201ENST00000393579 471 ntBASIC0.36□□□□□ -2.35
E2F3O00716 SNORD71-201ENST00000411292 86 ntBASIC0.36□□□□□ -2.35
E2F3O00716 AC022523.2-201ENST00000561045 150 ntBASIC0.36□□□□□ -2.35
E2F3O00716 MIR4514-201ENST00000581410 57 ntBASIC0.36□□□□□ -2.35
E2F3O00716 Y_RNA.32-201ENST00000362589 110 ntBASIC0.35□□□□□ -2.35
E2F3O00716 Y_RNA.420-201ENST00000384043 110 ntBASIC0.35□□□□□ -2.35
E2F3O00716 RNU6-291P-201ENST00000384720 107 ntBASIC0.35□□□□□ -2.35
E2F3O00716 AC138749.4-201ENST00000563970 127 ntBASIC0.35□□□□□ -2.35
E2F3O00716 AC023932.2-201ENST00000603176 175 ntBASIC0.35□□□□□ -2.35
E2F3O00716 AP001340.1-201ENST00000624405 217 ntBASIC0.35□□□□□ -2.35
E2F3O00716 AC021753.1-201ENST00000635724 168 ntBASIC0.35□□□□□ -2.35
E2F3O00716 Y_RNA.114-201ENST00000363265 113 ntBASIC0.34□□□□□ -2.36
E2F3O00716 RNU6-1229P-201ENST00000364295 107 ntBASIC0.34□□□□□ -2.36
E2F3O00716 RNU6-1104P-201ENST00000384723 104 ntBASIC0.34□□□□□ -2.36
E2F3O00716 MIR759-201ENST00000390224 91 ntBASIC0.34□□□□□ -2.36
E2F3O00716 SNORA40.8-201ENST00000411034 126 ntBASIC0.34□□□□□ -2.36
E2F3O00716 MTND5P41-201ENST00000517498 206 ntBASIC0.34□□□□□ -2.36
E2F3O00716 hsa-mir-3130-1.1-201ENST00000579223 75 ntBASIC0.34□□□□□ -2.36
E2F3O00716 MIRLET7D-201ENST00000362263 87 ntBASIC0.33□□□□□ -2.36
E2F3O00716 RNU6-647P-201ENST00000364243 107 ntBASIC0.33□□□□□ -2.36
E2F3O00716 Y_RNA.488-201ENST00000384403 102 ntBASIC0.33□□□□□ -2.36
E2F3O00716 Y_RNA.555-201ENST00000384673 110 ntBASIC0.33□□□□□ -2.36
E2F3O00716 TRAJ1-201ENST00000390536 62 ntAPPRIS P1 BASIC0.33□□□□□ -2.36
E2F3O00716 MIR1270-201ENST00000459320 83 ntBASIC0.33□□□□□ -2.36
E2F3O00716 RNU6-135P-201ENST00000516769 101 ntBASIC0.33□□□□□ -2.36
E2F3O00716 RNU7-6P-201ENST00000516845 62 ntBASIC0.33□□□□□ -2.36
E2F3O00716 SNORA25.18-201ENST00000607153 114 ntBASIC0.33□□□□□ -2.36
E2F3O00716 Y_RNA.98-201ENST00000363109 102 ntBASIC0.32□□□□□ -2.36
E2F3O00716 RNY1P2-201ENST00000364820 117 ntBASIC0.32□□□□□ -2.36
E2F3O00716 Y_RNA.294-201ENST00000364916 102 ntBASIC0.32□□□□□ -2.36
E2F3O00716 Y_RNA.448-201ENST00000384185 108 ntBASIC0.32□□□□□ -2.36
E2F3O00716 SNORA8.2-201ENST00000384372 139 ntBASIC0.32□□□□□ -2.36
E2F3O00716 MIR206-201ENST00000384872 86 ntBASIC0.32□□□□□ -2.36
E2F3O00716 MIR518A1-201ENST00000385068 85 ntBASIC0.32□□□□□ -2.36
E2F3O00716 MIRLET7F2-201ENST00000385277 83 ntBASIC0.32□□□□□ -2.36
E2F3O00716 RNU6-1321P-201ENST00000390905 107 ntBASIC0.32□□□□□ -2.36
E2F3O00716 MIR1263-201ENST00000408324 86 ntBASIC0.32□□□□□ -2.36
E2F3O00716 RN7SKP19-201ENST00000516016 252 ntBASIC0.32□□□□□ -2.36
Retrieved 100 of 98,524 protein–RNA pairs in 180.6 ms