Protein–RNA interactions for Protein: O00257

CBX4, E3 SUMO-protein ligase CBX4, humanhuman

Predictions only

Length 560 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CBX4O00257 FABP5P4-201ENST00000437203 171 ntBASIC1.34□□□□□ -2.19
CBX4O00257 RPS29P28-201ENST00000446439 141 ntBASIC1.34□□□□□ -2.19
CBX4O00257 FAM13A-AS1_1.1-201ENST00000612555 119 ntBASIC1.34□□□□□ -2.19
CBX4O00257 MIR1-1-201ENST00000362147 71 ntBASIC1.33□□□□□ -2.2
CBX4O00257 Y_RNA.98-201ENST00000363109 102 ntBASIC1.33□□□□□ -2.2
CBX4O00257 RNU1-36P-201ENST00000365130 165 ntBASIC1.33□□□□□ -2.2
CBX4O00257 MIR100-201ENST00000385259 80 ntBASIC1.33□□□□□ -2.2
CBX4O00257 RNU6ATAC41P-201ENST00000408600 126 ntBASIC1.33□□□□□ -2.2
CBX4O00257 AC004223.1-201ENST00000479840 271 ntBASIC1.33□□□□□ -2.2
CBX4O00257 AC087277.2-201ENST00000533203 151 ntTSL 5 BASIC1.33□□□□□ -2.2
CBX4O00257 AL391516.1-201ENST00000554380 2449 ntBASIC1.32□□□□□ -2.2
CBX4O00257 U8.6-201ENST00000364939 135 ntBASIC1.32□□□□□ -2.2
CBX4O00257 Y_RNA.323-201ENST00000365157 109 ntBASIC1.32□□□□□ -2.2
CBX4O00257 RNU6-1321P-201ENST00000390905 107 ntBASIC1.32□□□□□ -2.2
CBX4O00257 RNU6-955P-201ENST00000410497 104 ntBASIC1.32□□□□□ -2.2
CBX4O00257 RNU7-48P-201ENST00000458875 63 ntBASIC1.32□□□□□ -2.2
CBX4O00257 RNU4ATAC11P-201ENST00000515939 126 ntBASIC1.32□□□□□ -2.2
CBX4O00257 RNA5SP404-201ENST00000517118 132 ntBASIC1.32□□□□□ -2.2
CBX4O00257 MIR5009-201ENST00000578736 100 ntBASIC1.32□□□□□ -2.2
CBX4O00257 5S_rRNA.15-201ENST00000611169 127 ntBASIC1.32□□□□□ -2.2
CBX4O00257 AL136317.1-201ENST00000612653 226 ntBASIC1.32□□□□□ -2.2
CBX4O00257 ZGRF1-208ENST00000505019 6652 ntAPPRIS P1 TSL 5 BASIC1.31□□□□□ -2.2
CBX4O00257 SNORD114-26-201ENST00000363543 72 ntBASIC1.31□□□□□ -2.2
CBX4O00257 SNORA22-201ENST00000383907 134 ntBASIC1.31□□□□□ -2.2
CBX4O00257 MIR618-201ENST00000385287 98 ntBASIC1.31□□□□□ -2.2
CBX4O00257 MIR758-201ENST00000390227 88 ntBASIC1.31□□□□□ -2.2
CBX4O00257 RNY4P18-201ENST00000391107 89 ntBASIC1.31□□□□□ -2.2
CBX4O00257 SNORA40.6-201ENST00000391153 128 ntBASIC1.31□□□□□ -2.2
CBX4O00257 MIR942-201ENST00000401111 86 ntBASIC1.31□□□□□ -2.2
CBX4O00257 AL035461.1-201ENST00000421490 332 ntBASIC1.31□□□□□ -2.2
CBX4O00257 AC012668.1-201ENST00000457625 228 ntTSL 3 BASIC1.31□□□□□ -2.2
CBX4O00257 RNU6-977P-201ENST00000516411 103 ntBASIC1.31□□□□□ -2.2
CBX4O00257 AL512310.12-203ENST00000640543 90 ntBASIC1.31□□□□□ -2.2
CBX4O00257 ZNF654-201ENST00000309495 4957 ntAPPRIS P2 TSL 1 (best) BASIC1.31□□□□□ -2.2
CBX4O00257 ANGPTL3-201ENST00000371129 2805 ntAPPRIS P1 TSL 1 (best) BASIC1.3□□□□□ -2.2
CBX4O00257 RNU6-403P-201ENST00000363163 104 ntBASIC1.3□□□□□ -2.2
CBX4O00257 RNA5SP325-201ENST00000363756 130 ntBASIC1.3□□□□□ -2.2
CBX4O00257 RNU1-124P-201ENST00000363861 145 ntBASIC1.3□□□□□ -2.2
CBX4O00257 Y_RNA.328-201ENST00000365208 113 ntBASIC1.3□□□□□ -2.2
CBX4O00257 RNU6-1014P-201ENST00000383940 103 ntBASIC1.3□□□□□ -2.2
CBX4O00257 MIR125B2-201ENST00000385128 89 ntBASIC1.3□□□□□ -2.2
CBX4O00257 RNU4-83P-201ENST00000410863 133 ntBASIC1.3□□□□□ -2.2
CBX4O00257 AC015818.7-201ENST00000428754 109 ntBASIC1.3□□□□□ -2.2
CBX4O00257 AC087499.7-201ENST00000441958 109 ntBASIC1.3□□□□□ -2.2
CBX4O00257 RNU6-1018P-201ENST00000516577 106 ntBASIC1.3□□□□□ -2.2
CBX4O00257 MIR4676-201ENST00000583078 72 ntBASIC1.3□□□□□ -2.2
CBX4O00257 RNY1P2-201ENST00000364820 117 ntBASIC1.29□□□□□ -2.2
CBX4O00257 MIR1302-5-201ENST00000408164 150 ntBASIC1.29□□□□□ -2.2
CBX4O00257 MIR1827-201ENST00000408549 66 ntBASIC1.29□□□□□ -2.2
CBX4O00257 DEFB131E-201ENST00000532329 154 ntBASIC1.29□□□□□ -2.2
CBX4O00257 MIR3660-201ENST00000584845 100 ntBASIC1.29□□□□□ -2.2
CBX4O00257 AP001362.1-201ENST00000625165 124 ntBASIC1.29□□□□□ -2.2
CBX4O00257 U6.109-201ENST00000636749 87 ntBASIC1.29□□□□□ -2.2
CBX4O00257 RNA5SP133-201ENST00000363368 119 ntBASIC1.28□□□□□ -2.2
CBX4O00257 SNORD114-24-201ENST00000365029 72 ntBASIC1.28□□□□□ -2.2
CBX4O00257 RNU6-364P-201ENST00000384387 107 ntBASIC1.28□□□□□ -2.2
CBX4O00257 SNORA72.6-201ENST00000384520 129 ntBASIC1.28□□□□□ -2.2
CBX4O00257 MIR938-201ENST00000401216 83 ntBASIC1.28□□□□□ -2.2
CBX4O00257 ATP6V0E1P1-201ENST00000412537 226 ntBASIC1.28□□□□□ -2.2
CBX4O00257 SNORD124-201ENST00000459577 104 ntBASIC1.28□□□□□ -2.2
CBX4O00257 MIR4491-201ENST00000581087 68 ntBASIC1.28□□□□□ -2.2
CBX4O00257 AC020891.4-201ENST00000605745 93 ntBASIC1.28□□□□□ -2.2
CBX4O00257 Y_RNA.360-201ENST00000365512 102 ntBASIC1.27□□□□□ -2.21
CBX4O00257 SNORD38.2-201ENST00000384470 69 ntBASIC1.27□□□□□ -2.21
CBX4O00257 MIR520E-201ENST00000384867 87 ntBASIC1.27□□□□□ -2.21
CBX4O00257 MIR605-201ENST00000385078 83 ntBASIC1.27□□□□□ -2.21
CBX4O00257 RNU6-679P-201ENST00000391003 106 ntBASIC1.27□□□□□ -2.21
CBX4O00257 RPS29P1-201ENST00000465274 159 ntBASIC1.27□□□□□ -2.21
CBX4O00257 RNU6-1110P-201ENST00000516462 101 ntBASIC1.27□□□□□ -2.21
CBX4O00257 RNU7-156P-201ENST00000517214 74 ntBASIC1.27□□□□□ -2.21
CBX4O00257 AC068338.1-201ENST00000565567 176 ntBASIC1.27□□□□□ -2.21
CBX4O00257 MIR6779-201ENST00000617283 64 ntBASIC1.27□□□□□ -2.21
CBX4O00257 RNU6-1313P-201ENST00000362622 102 ntBASIC1.26□□□□□ -2.21
CBX4O00257 Y_RNA.163-201ENST00000363702 113 ntBASIC1.26□□□□□ -2.21
CBX4O00257 SNORD89-201ENST00000390981 114 ntBASIC1.26□□□□□ -2.21
CBX4O00257 AC096949.1-201ENST00000412047 152 ntBASIC1.26□□□□□ -2.21
CBX4O00257 U7.7-201ENST00000459276 60 ntBASIC1.26□□□□□ -2.21
CBX4O00257 AC138749.4-201ENST00000563970 127 ntBASIC1.26□□□□□ -2.21
CBX4O00257 MIR4694-201ENST00000578534 80 ntBASIC1.26□□□□□ -2.21
CBX4O00257 MIR376B-201ENST00000614515 100 ntBASIC1.26□□□□□ -2.21
CBX4O00257 MIR6515-201ENST00000619843 57 ntBASIC1.26□□□□□ -2.21
CBX4O00257 CEP290-201ENST00000309041 7616 ntAPPRIS ALT1 TSL 5 BASIC1.26□□□□□ -2.21
CBX4O00257 Y_RNA.36-201ENST00000362602 112 ntBASIC1.25□□□□□ -2.21
CBX4O00257 RNU4-58P-201ENST00000363192 141 ntBASIC1.25□□□□□ -2.21
CBX4O00257 RNU1-93P-201ENST00000364704 169 ntBASIC1.25□□□□□ -2.21
CBX4O00257 RNU6-939P-201ENST00000384634 107 ntBASIC1.25□□□□□ -2.21
CBX4O00257 MIR34C-201ENST00000384831 77 ntBASIC1.25□□□□□ -2.21
CBX4O00257 RNU6-1307P-201ENST00000391012 103 ntBASIC1.25□□□□□ -2.21
CBX4O00257 Y_RNA.588-201ENST00000391254 102 ntBASIC1.25□□□□□ -2.21
CBX4O00257 MIR4804-201ENST00000581683 73 ntBASIC1.25□□□□□ -2.21
CBX4O00257 RNU6-369P-201ENST00000362515 102 ntBASIC1.24□□□□□ -2.21
CBX4O00257 Y_RNA.119-201ENST00000363301 96 ntBASIC1.24□□□□□ -2.21
CBX4O00257 RNU6-44P-201ENST00000384045 107 ntBASIC1.24□□□□□ -2.21
CBX4O00257 MIR520F-201ENST00000384824 87 ntBASIC1.24□□□□□ -2.21
CBX4O00257 MIR150-201ENST00000385048 84 ntBASIC1.24□□□□□ -2.21
CBX4O00257 TRAJ1-201ENST00000390536 62 ntAPPRIS P1 BASIC1.24□□□□□ -2.21
CBX4O00257 AC096720.1-201ENST00000604441 183 ntBASIC1.24□□□□□ -2.21
CBX4O00257 uc_338.28-201ENST00000612082 187 ntBASIC1.24□□□□□ -2.21
CBX4O00257 OMD-201ENST00000375550 2449 ntAPPRIS P1 TSL 1 (best) BASIC1.23□□□□□ -2.21
CBX4O00257 RNY3P2-201ENST00000362918 102 ntBASIC1.23□□□□□ -2.21
Retrieved 100 of 98,524 protein–RNA pairs in 242.9 ms