Protein–RNA interactions for Protein: A6NKF7

TMEM88B, Transmembrane protein 88B, humanhuman

Predictions only

Length 163 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM88BA6NKF7 MIR4421-201ENST00000578133 69 ntBASIC1.98□□□□□ -2.09
TMEM88BA6NKF7 MIR4439-201ENST00000583746 80 ntBASIC1.98□□□□□ -2.09
TMEM88BA6NKF7 FSD1L-201ENST00000374707 7062 ntTSL 1 (best) BASIC1.98□□□□□ -2.09
TMEM88BA6NKF7 MIER3-204ENST00000381226 5210 ntAPPRIS ALT1 TSL 1 (best) BASIC1.97□□□□□ -2.09
TMEM88BA6NKF7 MIR222-201ENST00000384992 110 ntBASIC1.97□□□□□ -2.09
TMEM88BA6NKF7 SNORA75.2-201ENST00000391138 150 ntBASIC1.96□□□□□ -2.1
TMEM88BA6NKF7 SNORA75.3-201ENST00000391231 150 ntBASIC1.96□□□□□ -2.1
TMEM88BA6NKF7 SNORD93-201ENST00000408813 74 ntBASIC1.96□□□□□ -2.1
TMEM88BA6NKF7 SNORA19.1-201ENST00000410656 129 ntBASIC1.96□□□□□ -2.1
TMEM88BA6NKF7 RNU6-717P-201ENST00000459076 104 ntBASIC1.96□□□□□ -2.1
TMEM88BA6NKF7 RNU7-21P-201ENST00000459430 62 ntBASIC1.96□□□□□ -2.1
TMEM88BA6NKF7 RNU1-92P-201ENST00000517017 135 ntBASIC1.96□□□□□ -2.1
TMEM88BA6NKF7 ZNF209P-201ENST00000593450 2304 ntBASIC1.96□□□□□ -2.1
TMEM88BA6NKF7 SNORA16.1-201ENST00000364597 132 ntBASIC1.95□□□□□ -2.1
TMEM88BA6NKF7 RNU4-52P-201ENST00000384209 138 ntBASIC1.95□□□□□ -2.1
TMEM88BA6NKF7 SNORA67.6-201ENST00000391093 99 ntBASIC1.95□□□□□ -2.1
TMEM88BA6NKF7 MIR1257-201ENST00000408490 117 ntBASIC1.95□□□□□ -2.1
TMEM88BA6NKF7 AC106800.4-201ENST00000614905 153 ntBASIC1.95□□□□□ -2.1
TMEM88BA6NKF7 AP000553.5-201ENST00000641933 54 ntBASIC1.95□□□□□ -2.1
TMEM88BA6NKF7 ZDBF2-202ENST00000611847 9890 ntTSL 5 BASIC1.95□□□□□ -2.1
TMEM88BA6NKF7 MIR34C-201ENST00000384831 77 ntBASIC1.94□□□□□ -2.1
TMEM88BA6NKF7 RNU6-994P-201ENST00000410507 111 ntBASIC1.94□□□□□ -2.1
TMEM88BA6NKF7 AC004941.2-201ENST00000427009 228 ntBASIC1.94□□□□□ -2.1
TMEM88BA6NKF7 AL353813.1-201ENST00000440700 253 ntBASIC1.94□□□□□ -2.1
TMEM88BA6NKF7 SNORD79.1-201ENST00000516069 84 ntBASIC1.94□□□□□ -2.1
TMEM88BA6NKF7 AC036111.3-201ENST00000526389 112 ntBASIC1.94□□□□□ -2.1
TMEM88BA6NKF7 MTND5P40-201ENST00000559945 246 ntBASIC1.94□□□□□ -2.1
TMEM88BA6NKF7 MIR376B-201ENST00000614515 100 ntBASIC1.94□□□□□ -2.1
TMEM88BA6NKF7 hsa-mir-3158-1.1-201ENST00000637571 81 ntBASIC1.94□□□□□ -2.1
TMEM88BA6NKF7 EYS-205ENST00000393380 5450 ntTSL 1 (best) BASIC1.93□□□□□ -2.1
TMEM88BA6NKF7 Y_RNA.205-201ENST00000364128 113 ntBASIC1.93□□□□□ -2.1
TMEM88BA6NKF7 RNU6-934P-201ENST00000365154 107 ntBASIC1.93□□□□□ -2.1
TMEM88BA6NKF7 MIR598-201ENST00000384868 97 ntBASIC1.93□□□□□ -2.1
TMEM88BA6NKF7 U8.15-201ENST00000390947 134 ntBASIC1.93□□□□□ -2.1
TMEM88BA6NKF7 AC067940.1-201ENST00000458411 300 ntBASIC1.93□□□□□ -2.1
TMEM88BA6NKF7 RNU6-90P-201ENST00000606352 106 ntBASIC1.93□□□□□ -2.1
TMEM88BA6NKF7 AL353770.2-201ENST00000620024 78 ntBASIC1.93□□□□□ -2.1
TMEM88BA6NKF7 C9orf84-204ENST00000394777 4955 ntAPPRIS ALT2 TSL 1 (best) BASIC1.93□□□□□ -2.1
TMEM88BA6NKF7 AC096949.1-201ENST00000412047 152 ntBASIC1.92□□□□□ -2.1
TMEM88BA6NKF7 RNU6-109P-201ENST00000516364 107 ntBASIC1.92□□□□□ -2.1
TMEM88BA6NKF7 RNU6-184P-201ENST00000516514 107 ntBASIC1.92□□□□□ -2.1
TMEM88BA6NKF7 RNA5SP170-201ENST00000517150 101 ntBASIC1.92□□□□□ -2.1
TMEM88BA6NKF7 NFIA-AS1-206ENST00000630199 220 ntTSL 5 BASIC1.92□□□□□ -2.1
TMEM88BA6NKF7 AC023934.1-201ENST00000574529 2389 ntBASIC1.91□□□□□ -2.1
TMEM88BA6NKF7 MIR96-201ENST00000362288 78 ntBASIC1.91□□□□□ -2.1
TMEM88BA6NKF7 RNA5SP138-201ENST00000365098 114 ntBASIC1.91□□□□□ -2.1
TMEM88BA6NKF7 RNU6ATAC6P-201ENST00000408132 126 ntBASIC1.91□□□□□ -2.1
TMEM88BA6NKF7 U6.109-201ENST00000636749 87 ntBASIC1.91□□□□□ -2.1
TMEM88BA6NKF7 JMJD1C-212ENST00000639129 7901 ntAPPRIS ALT2 TSL 5 BASIC1.91□□□□□ -2.1
TMEM88BA6NKF7 ZNF654-201ENST00000309495 4957 ntAPPRIS P2 TSL 1 (best) BASIC1.91□□□□□ -2.1
TMEM88BA6NKF7 HIF1A-204ENST00000539097 3956 ntTSL 1 (best) BASIC1.9□□□□□ -2.1
TMEM88BA6NKF7 RNU6-170P-201ENST00000362832 104 ntBASIC1.9□□□□□ -2.11
TMEM88BA6NKF7 Y_RNA.95-201ENST00000363079 95 ntBASIC1.9□□□□□ -2.11
TMEM88BA6NKF7 RNA5SP133-201ENST00000363368 119 ntBASIC1.9□□□□□ -2.11
TMEM88BA6NKF7 Y_RNA.348-201ENST00000365403 103 ntBASIC1.9□□□□□ -2.11
TMEM88BA6NKF7 MTATP8P2-201ENST00000435212 202 ntBASIC1.9□□□□□ -2.11
TMEM88BA6NKF7 SPINT5P-201ENST00000448174 155 ntBASIC1.9□□□□□ -2.11
TMEM88BA6NKF7 UBL5P1-201ENST00000507979 193 ntBASIC1.9□□□□□ -2.11
TMEM88BA6NKF7 AC023827.1-201ENST00000569247 97 ntBASIC1.9□□□□□ -2.11
TMEM88BA6NKF7 MIR4448-201ENST00000584360 86 ntBASIC1.9□□□□□ -2.11
TMEM88BA6NKF7 USP53-202ENST00000450251 6072 ntAPPRIS P1 TSL 5 BASIC1.9□□□□□ -2.11
TMEM88BA6NKF7 RNU4-58P-201ENST00000363192 141 ntBASIC1.89□□□□□ -2.11
TMEM88BA6NKF7 RNU1-36P-201ENST00000365130 165 ntBASIC1.89□□□□□ -2.11
TMEM88BA6NKF7 RNA5SP37-201ENST00000365420 130 ntBASIC1.89□□□□□ -2.11
TMEM88BA6NKF7 Y_RNA.363-201ENST00000365529 113 ntBASIC1.89□□□□□ -2.11
TMEM88BA6NKF7 RNU6-1307P-201ENST00000391012 103 ntBASIC1.89□□□□□ -2.11
TMEM88BA6NKF7 MIR548G-201ENST00000408442 89 ntBASIC1.89□□□□□ -2.11
TMEM88BA6NKF7 RNU7-185P-201ENST00000459215 60 ntBASIC1.89□□□□□ -2.11
TMEM88BA6NKF7 CCDC68-202ENST00000432185 4014 ntAPPRIS P1 TSL 1 (best) BASIC1.88□□□□□ -2.11
TMEM88BA6NKF7 AC008163.1-202ENST00000636004 2889 ntBASIC1.88□□□□□ -2.11
TMEM88BA6NKF7 MIR517C-201ENST00000385103 95 ntBASIC1.88□□□□□ -2.11
TMEM88BA6NKF7 RNU6ATAC8P-201ENST00000408460 126 ntBASIC1.88□□□□□ -2.11
TMEM88BA6NKF7 Y_RNA.705-201ENST00000516862 110 ntBASIC1.88□□□□□ -2.11
TMEM88BA6NKF7 AC138749.4-201ENST00000563970 127 ntBASIC1.88□□□□□ -2.11
TMEM88BA6NKF7 MIR4419B-201ENST00000577260 68 ntBASIC1.88□□□□□ -2.11
TMEM88BA6NKF7 FSIP2-202ENST00000424728 20788 ntAPPRIS P2 TSL 5 BASIC1.87□□□□□ -2.11
TMEM88BA6NKF7 SNORA25-201ENST00000384384 134 ntBASIC1.87□□□□□ -2.11
TMEM88BA6NKF7 RNU6-1006P-201ENST00000516998 103 ntBASIC1.87□□□□□ -2.11
TMEM88BA6NKF7 RNU6-1223P-201ENST00000517124 104 ntBASIC1.87□□□□□ -2.11
TMEM88BA6NKF7 MIR4771-2-201ENST00000577758 74 ntBASIC1.87□□□□□ -2.11
TMEM88BA6NKF7 MIR4500-201ENST00000579472 76 ntBASIC1.87□□□□□ -2.11
TMEM88BA6NKF7 MIR4771-1-201ENST00000582617 74 ntBASIC1.87□□□□□ -2.11
TMEM88BA6NKF7 MIR6078-201ENST00000611069 100 ntBASIC1.87□□□□□ -2.11
TMEM88BA6NKF7 RNU6-403P-201ENST00000363163 104 ntBASIC1.86□□□□□ -2.11
TMEM88BA6NKF7 Y_RNA.119-201ENST00000363301 96 ntBASIC1.86□□□□□ -2.11
TMEM88BA6NKF7 Y_RNA.220-201ENST00000364244 109 ntBASIC1.86□□□□□ -2.11
TMEM88BA6NKF7 RNU6-972P-201ENST00000391208 107 ntBASIC1.86□□□□□ -2.11
TMEM88BA6NKF7 RNY4P30-201ENST00000410216 95 ntBASIC1.86□□□□□ -2.11
TMEM88BA6NKF7 RNU4-83P-201ENST00000410863 133 ntBASIC1.86□□□□□ -2.11
TMEM88BA6NKF7 SNORD83.1-201ENST00000411362 77 ntBASIC1.86□□□□□ -2.11
TMEM88BA6NKF7 COX7A2-206ENST00000472311 325 ntTSL 2 BASIC1.86□□□□□ -2.11
TMEM88BA6NKF7 SNORA31.24-201ENST00000517232 57 ntBASIC1.86□□□□□ -2.11
TMEM88BA6NKF7 uc_338.6-201ENST00000613544 171 ntBASIC1.86□□□□□ -2.11
TMEM88BA6NKF7 HSBP1P2-201ENST00000299671 229 ntBASIC1.85□□□□□ -2.11
TMEM88BA6NKF7 RNU1-93P-201ENST00000364704 169 ntBASIC1.85□□□□□ -2.11
TMEM88BA6NKF7 RNU6-905P-201ENST00000384434 107 ntBASIC1.85□□□□□ -2.11
TMEM88BA6NKF7 SNORA72.6-201ENST00000384520 129 ntBASIC1.85□□□□□ -2.11
TMEM88BA6NKF7 RPS26P5-201ENST00000418544 335 ntBASIC1.85□□□□□ -2.11
TMEM88BA6NKF7 RNU6-1194P-201ENST00000516208 104 ntBASIC1.85□□□□□ -2.11
TMEM88BA6NKF7 RNU6-795P-201ENST00000516323 103 ntBASIC1.85□□□□□ -2.11
Retrieved 100 of 98,524 protein–RNA pairs in 260.8 ms