Protein–RNA interactions for Protein: A0A0D9SF12

CCDC163, Coiled-coil domain-containing 163, humanhuman

Predictions only

Length 145 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC163A0A0D9SF12 SNORA40.6-201ENST00000391153 128 ntBASIC1.34□□□□□ -2.19
CCDC163A0A0D9SF12 RPL39P34-201ENST00000477141 156 ntBASIC1.34□□□□□ -2.19
CCDC163A0A0D9SF12 AC103879.1-201ENST00000503093 255 ntTSL 2 BASIC1.34□□□□□ -2.19
CCDC163A0A0D9SF12 RNU6-412P-201ENST00000516434 106 ntBASIC1.34□□□□□ -2.19
CCDC163A0A0D9SF12 RNU7-156P-201ENST00000517214 74 ntBASIC1.34□□□□□ -2.19
CCDC163A0A0D9SF12 MIR4679-2-201ENST00000578358 77 ntBASIC1.34□□□□□ -2.19
CCDC163A0A0D9SF12 MIR4491-201ENST00000581087 68 ntBASIC1.34□□□□□ -2.19
CCDC163A0A0D9SF12 AC022709.1-201ENST00000615967 87 ntBASIC1.34□□□□□ -2.19
CCDC163A0A0D9SF12 AL162726.3-218ENST00000636401 95 ntBASIC1.34□□□□□ -2.19
CCDC163A0A0D9SF12 LMBR1-222ENST00000638959 93 ntTSL 5 BASIC1.34□□□□□ -2.19
CCDC163A0A0D9SF12 DENND4A-209ENST00000635620 5887 ntTSL 5 BASIC1.33□□□□□ -2.2
CCDC163A0A0D9SF12 RNA5SP133-201ENST00000363368 119 ntBASIC1.33□□□□□ -2.2
CCDC163A0A0D9SF12 RNU1-124P-201ENST00000363861 145 ntBASIC1.33□□□□□ -2.2
CCDC163A0A0D9SF12 Y_RNA.309-201ENST00000365046 111 ntBASIC1.33□□□□□ -2.2
CCDC163A0A0D9SF12 SNORD20-201ENST00000384550 80 ntBASIC1.33□□□□□ -2.2
CCDC163A0A0D9SF12 MIR200A-201ENST00000384875 90 ntBASIC1.33□□□□□ -2.2
CCDC163A0A0D9SF12 MIR125B2-201ENST00000385128 89 ntBASIC1.33□□□□□ -2.2
CCDC163A0A0D9SF12 MIR96-201ENST00000362288 78 ntBASIC1.32□□□□□ -2.2
CCDC163A0A0D9SF12 RNU6-363P-201ENST00000362895 105 ntBASIC1.32□□□□□ -2.2
CCDC163A0A0D9SF12 SNORD114-24-201ENST00000365029 72 ntBASIC1.32□□□□□ -2.2
CCDC163A0A0D9SF12 MIR938-201ENST00000401216 83 ntBASIC1.32□□□□□ -2.2
CCDC163A0A0D9SF12 MIR1912-201ENST00000410389 80 ntBASIC1.32□□□□□ -2.2
CCDC163A0A0D9SF12 RNU7-48P-201ENST00000458875 63 ntBASIC1.32□□□□□ -2.2
CCDC163A0A0D9SF12 AC068339.1-201ENST00000526965 141 ntBASIC1.32□□□□□ -2.2
CCDC163A0A0D9SF12 Y_RNA.49-201ENST00000362714 112 ntBASIC1.31□□□□□ -2.2
CCDC163A0A0D9SF12 Y_RNA.98-201ENST00000363109 102 ntBASIC1.31□□□□□ -2.2
CCDC163A0A0D9SF12 Y_RNA.328-201ENST00000365208 113 ntBASIC1.31□□□□□ -2.2
CCDC163A0A0D9SF12 MIR605-201ENST00000385078 83 ntBASIC1.31□□□□□ -2.2
CCDC163A0A0D9SF12 RNU6-1307P-201ENST00000391012 103 ntBASIC1.31□□□□□ -2.2
CCDC163A0A0D9SF12 RNU6-447P-201ENST00000410293 104 ntBASIC1.31□□□□□ -2.2
CCDC163A0A0D9SF12 RNU6-1118P-201ENST00000410382 104 ntBASIC1.31□□□□□ -2.2
CCDC163A0A0D9SF12 RNU6-1076P-201ENST00000410397 104 ntBASIC1.31□□□□□ -2.2
CCDC163A0A0D9SF12 RNU6-355P-201ENST00000410427 104 ntBASIC1.31□□□□□ -2.2
CCDC163A0A0D9SF12 RNU6-791P-201ENST00000410467 104 ntBASIC1.31□□□□□ -2.2
CCDC163A0A0D9SF12 RNU6-705P-201ENST00000410601 104 ntBASIC1.31□□□□□ -2.2
CCDC163A0A0D9SF12 RNU6-1100P-201ENST00000410691 104 ntBASIC1.31□□□□□ -2.2
CCDC163A0A0D9SF12 RNU6-733P-201ENST00000410759 104 ntBASIC1.31□□□□□ -2.2
CCDC163A0A0D9SF12 RNU6-860P-201ENST00000410860 104 ntBASIC1.31□□□□□ -2.2
CCDC163A0A0D9SF12 RNU6-1217P-201ENST00000411276 104 ntBASIC1.31□□□□□ -2.2
CCDC163A0A0D9SF12 RNU6-785P-201ENST00000411324 104 ntBASIC1.31□□□□□ -2.2
CCDC163A0A0D9SF12 AC004223.1-201ENST00000479840 271 ntBASIC1.31□□□□□ -2.2
CCDC163A0A0D9SF12 RNU4ATAC11P-201ENST00000515939 126 ntBASIC1.31□□□□□ -2.2
CCDC163A0A0D9SF12 RNA5SP480-201ENST00000516840 109 ntBASIC1.31□□□□□ -2.2
CCDC163A0A0D9SF12 AL136317.1-201ENST00000612653 226 ntBASIC1.31□□□□□ -2.2
CCDC163A0A0D9SF12 U6.90-201ENST00000614007 104 ntBASIC1.31□□□□□ -2.2
CCDC163A0A0D9SF12 U6.70-201ENST00000620287 104 ntBASIC1.31□□□□□ -2.2
CCDC163A0A0D9SF12 C9orf84-204ENST00000394777 4955 ntAPPRIS ALT2 TSL 1 (best) BASIC1.31□□□□□ -2.2
CCDC163A0A0D9SF12 CCDC73-201ENST00000335185 3849 ntAPPRIS P2 TSL 2 BASIC1.3□□□□□ -2.2
CCDC163A0A0D9SF12 Y_RNA.85-201ENST00000363014 111 ntBASIC1.3□□□□□ -2.2
CCDC163A0A0D9SF12 RNU6-1107P-201ENST00000364817 104 ntBASIC1.3□□□□□ -2.2
CCDC163A0A0D9SF12 U8.6-201ENST00000364939 135 ntBASIC1.3□□□□□ -2.2
CCDC163A0A0D9SF12 SNORA22-201ENST00000383907 134 ntBASIC1.3□□□□□ -2.2
CCDC163A0A0D9SF12 MIR320A-201ENST00000385302 82 ntBASIC1.3□□□□□ -2.2
CCDC163A0A0D9SF12 MIR1827-201ENST00000408549 66 ntBASIC1.3□□□□□ -2.2
CCDC163A0A0D9SF12 SNORA25.16-201ENST00000516741 121 ntBASIC1.3□□□□□ -2.2
CCDC163A0A0D9SF12 MIR4804-201ENST00000581683 73 ntBASIC1.3□□□□□ -2.2
CCDC163A0A0D9SF12 Y_RNA.13-201ENST00000362403 112 ntBASIC1.29□□□□□ -2.2
CCDC163A0A0D9SF12 RNU1-119P-201ENST00000391122 165 ntBASIC1.29□□□□□ -2.2
CCDC163A0A0D9SF12 OR2A41P-201ENST00000473586 105 ntBASIC1.29□□□□□ -2.2
CCDC163A0A0D9SF12 MIR4500-201ENST00000579472 76 ntBASIC1.29□□□□□ -2.2
CCDC163A0A0D9SF12 RNU6-369P-201ENST00000362515 102 ntBASIC1.28□□□□□ -2.2
CCDC163A0A0D9SF12 Y_RNA.119-201ENST00000363301 96 ntBASIC1.28□□□□□ -2.2
CCDC163A0A0D9SF12 SNORD114-26-201ENST00000363543 72 ntBASIC1.28□□□□□ -2.2
CCDC163A0A0D9SF12 Y_RNA.281-201ENST00000364774 94 ntBASIC1.28□□□□□ -2.2
CCDC163A0A0D9SF12 U7.7-201ENST00000459276 60 ntBASIC1.28□□□□□ -2.2
CCDC163A0A0D9SF12 RNU6-531P-201ENST00000516694 104 ntBASIC1.28□□□□□ -2.2
CCDC163A0A0D9SF12 AC138749.4-201ENST00000563970 127 ntBASIC1.28□□□□□ -2.2
CCDC163A0A0D9SF12 MIR5009-201ENST00000578736 100 ntBASIC1.28□□□□□ -2.2
CCDC163A0A0D9SF12 RNU6-679P-201ENST00000391003 106 ntBASIC1.27□□□□□ -2.21
CCDC163A0A0D9SF12 Y_RNA.588-201ENST00000391254 102 ntBASIC1.27□□□□□ -2.21
CCDC163A0A0D9SF12 AC096949.1-201ENST00000412047 152 ntBASIC1.27□□□□□ -2.21
CCDC163A0A0D9SF12 RNU7-102P-201ENST00000458948 62 ntBASIC1.27□□□□□ -2.21
CCDC163A0A0D9SF12 PDCD5P2-201ENST00000507570 312 ntBASIC1.27□□□□□ -2.21
CCDC163A0A0D9SF12 UBL5P1-201ENST00000507979 193 ntBASIC1.27□□□□□ -2.21
CCDC163A0A0D9SF12 RNU6-1110P-201ENST00000516462 101 ntBASIC1.27□□□□□ -2.21
CCDC163A0A0D9SF12 Y_RNA.709-201ENST00000516952 92 ntBASIC1.27□□□□□ -2.21
CCDC163A0A0D9SF12 RNU6-1223P-201ENST00000517124 104 ntBASIC1.27□□□□□ -2.21
CCDC163A0A0D9SF12 AC032019.2-201ENST00000584916 403 ntTSL 5 BASIC1.27□□□□□ -2.21
CCDC163A0A0D9SF12 MIR376B-201ENST00000614515 100 ntBASIC1.27□□□□□ -2.21
CCDC163A0A0D9SF12 MIR34C-201ENST00000384831 77 ntBASIC1.26□□□□□ -2.21
CCDC163A0A0D9SF12 MIR520H-201ENST00000385126 88 ntBASIC1.26□□□□□ -2.21
CCDC163A0A0D9SF12 RNU7-56P-201ENST00000458744 62 ntBASIC1.26□□□□□ -2.21
CCDC163A0A0D9SF12 RNU6-589P-201ENST00000516485 107 ntBASIC1.26□□□□□ -2.21
CCDC163A0A0D9SF12 IGLVVI-22-1-201ENST00000521183 211 ntBASIC1.26□□□□□ -2.21
CCDC163A0A0D9SF12 MIR6515-201ENST00000619843 57 ntBASIC1.26□□□□□ -2.21
CCDC163A0A0D9SF12 AP001362.1-201ENST00000625165 124 ntBASIC1.26□□□□□ -2.21
CCDC163A0A0D9SF12 NFIA-AS1-206ENST00000630199 220 ntTSL 5 BASIC1.26□□□□□ -2.21
CCDC163A0A0D9SF12 IL6ST-203ENST00000381287 8667 ntTSL 5 BASIC1.25□□□□□ -2.21
CCDC163A0A0D9SF12 RNY1P2-201ENST00000364820 117 ntBASIC1.25□□□□□ -2.21
CCDC163A0A0D9SF12 RNU6-1014P-201ENST00000383940 103 ntBASIC1.25□□□□□ -2.21
CCDC163A0A0D9SF12 MIR758-201ENST00000390227 88 ntBASIC1.25□□□□□ -2.21
CCDC163A0A0D9SF12 MIR4661-201ENST00000582720 75 ntBASIC1.25□□□□□ -2.21
CCDC163A0A0D9SF12 AC013244.2-201ENST00000603396 103 ntBASIC1.25□□□□□ -2.21
CCDC163A0A0D9SF12 MIR6082-201ENST00000613604 109 ntBASIC1.25□□□□□ -2.21
CCDC163A0A0D9SF12 MIR7974-201ENST00000615835 79 ntBASIC1.25□□□□□ -2.21
CCDC163A0A0D9SF12 MIR6788-201ENST00000618842 66 ntBASIC1.25□□□□□ -2.21
CCDC163A0A0D9SF12 RNU4-58P-201ENST00000363192 141 ntBASIC1.24□□□□□ -2.21
CCDC163A0A0D9SF12 RNU6-1335P-201ENST00000365426 107 ntBASIC1.24□□□□□ -2.21
CCDC163A0A0D9SF12 MIR520E-201ENST00000384867 87 ntBASIC1.24□□□□□ -2.21
CCDC163A0A0D9SF12 SNORD105-201ENST00000386910 85 ntBASIC1.24□□□□□ -2.21
Retrieved 100 of 98,524 protein–RNA pairs in 178.5 ms